RNA–Protein interactions for RNA: YJR104C

SOD1, Transcript of Cytosolic copper-zinc superoxide dismutase, yeast

Gene SOD1, Length 465 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SOD1	YJR104C	CAF120	P53836	1060 aa		3.91	□□□□□ -1.78
SOD1	YJR104C	JJJ1	P53863	590 aa		3.91	□□□□□ -1.78
SOD1	YJR104C	ISU1	Q03020	165 aa		3.91	□□□□□ -1.78
SOD1	YJR104C	ARR1	Q06596	294 aa		3.91	□□□□□ -1.78
SOD1	YJR104C	THI3	Q07471	609 aa		3.91	□□□□□ -1.78
SOD1	YJR104C	SLP1	Q12232	587 aa		3.91	□□□□□ -1.78
SOD1	YJR104C	TY1B-A	O13527	1196 aa	Known RBP	3.9	□□□□□ -1.79
SOD1	YJR104C	TUB2	P02557	457 aa	Known RBP	3.9	□□□□□ -1.79
SOD1	YJR104C	CYT1	P07143	309 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	RPS6A	P0CX37	236 aa	Known RBP	3.9	□□□□□ -1.79
SOD1	YJR104C	RPS6B	P0CX38	236 aa	Predicted RBP	3.9	□□□□□ -1.79
SOD1	YJR104C	DAL5	P15365	543 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	CLN1	P20437	546 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	SEC20	P28791	383 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	RAD16	P31244	790 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	RRN6	P32786	894 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	PEX2	P32800	271 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	AIM20	P40451	204 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	MPH1	P40562	993 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	LEM3	P42838	414 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	JJJ2	P46997	583 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	NPA3	P47122	385 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	SUB1	P54000	292 aa	Known RBP	3.9	□□□□□ -1.79
SOD1	YJR104C	DAK1	P54838	584 aa	Known RBP	3.9	□□□□□ -1.79
SOD1	YJR104C	FCP1	Q03254	732 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	HRQ1	Q05549	1077 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	BDS1	Q08347	646 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	SGO1	Q08490	590 aa		3.9	□□□□□ -1.79
SOD1	YJR104C	ACC1	Q00955	2233 aa	Known RBP	3.89	□□□□□ -1.79
SOD1	YJR104C	SWI6	P09959	803 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	BIK1	P11709	440 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	VMA2	P16140	517 aa	Known RBP	3.89	□□□□□ -1.79
SOD1	YJR104C	PER1	P25625	357 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	HEM3	P28789	327 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	YME2	P32843	850 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	NUF2	P33895	451 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	YKL097C	P34245	136 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	MNR2	P35724	969 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	ERP5	P38819	212 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	PET100	P38958	111 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	GPB2	P39717	880 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	DLD3	P39976	496 aa	Known RBP	3.89	□□□□□ -1.79
SOD1	YJR104C	SEC9	P40357	651 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	SEC26	P41810	973 aa	Known RBP	3.89	□□□□□ -1.79
SOD1	YJR104C	YJL045W	P47052	634 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	SGM1	P47166	707 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	YMR206W	Q03695	313 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	INP2	Q03824	705 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	ARO80	Q04052	950 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	HCR1	Q05775	265 aa	Known RBP	3.89	□□□□□ -1.79
SOD1	YJR104C	PSF3	Q12146	194 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	RTP1	Q12751	981 aa		3.89	□□□□□ -1.79
SOD1	YJR104C	CDC37	P06101	506 aa	Known RBP	3.88	□□□□□ -1.79
SOD1	YJR104C	SES1	P07284	462 aa	Known RBP	3.88	□□□□□ -1.79
SOD1	YJR104C	SWI5	P08153	709 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	RNR2	P09938	399 aa	Known RBP	3.88	□□□□□ -1.79
SOD1	YJR104C	MCM1	P11746	286 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	THR4	P16120	514 aa	Known RBP	3.88	□□□□□ -1.79
SOD1	YJR104C	AMS1	P22855	1083 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	PUP3	P25451	205 aa	Known RBP	3.88	□□□□□ -1.79
SOD1	YJR104C	BRF1	P29056	596 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	MRT4	P33201	236 aa	Known RBP	3.88	□□□□□ -1.79
SOD1	YJR104C	SKI2	P35207	1287 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
SOD1	YJR104C	YKR018C	P36114	725 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	ISW1	P38144	1129 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	GLO3	P38682	493 aa	Known RBP	3.88	□□□□□ -1.79
SOD1	YJR104C	YPT35	P38815	214 aa	Known RBP	3.88	□□□□□ -1.79
SOD1	YJR104C	XDJ1	P39102	459 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	SIT1	P39980	628 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	3.88	□□□□□ -1.79	not detected
SOD1	YJR104C	SHE4	P51534	789 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	YGL081W	P53156	320 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	HED1	Q03937	162 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	VPS20	Q04272	221 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	VMS1	Q04311	632 aa	Known RBP	3.88	□□□□□ -1.79
SOD1	YJR104C	GYL1	Q04322	720 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	DFG5	Q05031	458 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	COG4	Q06096	861 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	OMS1	Q06668	471 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	APC11	Q12157	165 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	NKP1	Q12493	238 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	SMC6	Q12749	1114 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	TY4A-H	Q6Q5P6	413 aa		3.88	□□□□□ -1.79
SOD1	YJR104C	ASF1	P32447	279 aa		3.87	□□□□□ -1.79
SOD1	YJR104C	NGR1	P32831	672 aa	Known RBP	3.87	□□□□□ -1.79
SOD1	YJR104C	TIF3	P34167	436 aa	Known RBP	3.87	□□□□□ -1.79
SOD1	YJR104C	SEG2	P34250	1132 aa		3.87	□□□□□ -1.79
SOD1	YJR104C	RRP1	P35178	278 aa	Predicted RBP	3.87	□□□□□ -1.79
SOD1	YJR104C	DID4	P36108	232 aa		3.87	□□□□□ -1.79
SOD1	YJR104C	AKL1	P38080	1108 aa	Known RBP	3.87	□□□□□ -1.79
SOD1	YJR104C	IST1	P53843	298 aa	Predicted RBP	3.87	□□□□□ -1.79
SOD1	YJR104C	BUL2	Q03758	920 aa	Known RBP	3.87	□□□□□ -1.79
SOD1	YJR104C	YML053C	Q04978	212 aa		3.87	□□□□□ -1.79
SOD1	YJR104C	EIS1	Q05050	843 aa	Known RBP	3.87	□□□□□ -1.79
SOD1	YJR104C	TSR1	Q07381	788 aa	Known RBP	3.87	□□□□□ -1.79
SOD1	YJR104C	ATG9	Q12142	997 aa		3.87	□□□□□ -1.79
SOD1	YJR104C	MSB2	P32334	1306 aa		3.87	□□□□□ -1.79
SOD1	YJR104C	STE6	P12866	1290 aa		3.86	□□□□□ -1.79
SOD1	YJR104C	STE11	P23561	717 aa		3.86	□□□□□ -1.79
SOD1	YJR104C	CDC10	P25342	322 aa	Known RBP	3.86	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 96.5 ms