RNA–Protein interactions for RNA: YGL190C

CDC55, Transcript of Non-essential regulatory subunit B of protein phosphatase 2A (PP2A), yeast

Gene CDC55, Length 1,581 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC55	YGL190C	SPF1	P39986	1215 aa	Known RBP	4.05	□□□□□ -1.76
CDC55	YGL190C	CHA4	P43634	648 aa		4.05	□□□□□ -1.76
CDC55	YGL190C	PHO23	P50947	330 aa		4.05	□□□□□ -1.76
CDC55	YGL190C	HIS5	P07172	385 aa		4.04	□□□□□ -1.76
CDC55	YGL190C	SPE1	P08432	466 aa		4.04	□□□□□ -1.76
CDC55	YGL190C	SNF7	P39929	240 aa	Known RBP	4.04	□□□□□ -1.76
CDC55	YGL190C	PFD1	P46988	109 aa		4.04	□□□□□ -1.76
CDC55	YGL190C	IOC4	Q04213	475 aa		4.04	□□□□□ -1.76
CDC55	YGL190C	WHI4	Q07655	649 aa	Known RBP	4.04	□□□□□ -1.76
CDC55	YGL190C	ERT1	P38140	529 aa		4.03	□□□□□ -1.76
CDC55	YGL190C	GYP7	P48365	746 aa		4.03	□□□□□ -1.76
CDC55	YGL190C	SSF2	Q12153	453 aa	Predicted RBP	4.03	□□□□□ -1.76
CDC55	YGL190C	NTO1	Q12311	748 aa		4.03	□□□□□ -1.76
CDC55	YGL190C	KCS1	Q12494	1050 aa		4.03	□□□□□ -1.76
CDC55	YGL190C	TUB2	P02557	457 aa	Known RBP	4.02	□□□□□ -1.77
CDC55	YGL190C	PMA1	P05030	918 aa	Known RBP	4.02	□□□□□ -1.77
CDC55	YGL190C	HCM1	P25364	564 aa		4.02	□□□□□ -1.77
CDC55	YGL190C	DCG1	P32460	244 aa		4.02	□□□□□ -1.77
CDC55	YGL190C	MRP8	P35719	219 aa		4.02	□□□□□ -1.77
CDC55	YGL190C	YKE2	P52553	114 aa		4.02	□□□□□ -1.77
CDC55	YGL190C	BUL2	Q03758	920 aa	Known RBP	4.02	□□□□□ -1.77
CDC55	YGL190C	YDR306C	Q06640	478 aa		4.02	□□□□□ -1.77
CDC55	YGL190C	LAS17	Q12446	633 aa		4.02	□□□□□ -1.77
CDC55	YGL190C	HSF1	P10961	833 aa		4.02	□□□□□ -1.77
CDC55	YGL190C	HBS1	P32769	611 aa	Known RBP	4.02	□□□□□ -1.77
CDC55	YGL190C	URM1	P40554	99 aa	Predicted RBP	4.02	□□□□□ -1.77
CDC55	YGL190C	EXG2	P52911	562 aa		4.02	□□□□□ -1.77
CDC55	YGL190C	SLI1	P53304	468 aa		4.02	□□□□□ -1.77
CDC55	YGL190C	SRP1	Q02821	542 aa	Known RBP	4.02	□□□□□ -1.77
CDC55	YGL190C	TRM2	P33753	639 aa		4.01	□□□□□ -1.77
CDC55	YGL190C	PBY1	P38254	753 aa		4.01	□□□□□ -1.77
CDC55	YGL190C	YBR184W	P38299	523 aa		4.01	□□□□□ -1.77
CDC55	YGL190C	YBR238C	P38330	731 aa	Known RBP	4.01	□□□□□ -1.77
CDC55	YGL190C	YER158C	P40095	573 aa		4.01	□□□□□ -1.77
CDC55	YGL190C	KRI1	P42846	591 aa	Known RBP	4.01	□□□□□ -1.77
CDC55	YGL190C	NCS6	P53088	359 aa		4.01	□□□□□ -1.77
CDC55	YGL190C	GSF2	Q04697	403 aa	Known RBP	4.01	□□□□□ -1.77
CDC55	YGL190C	TDA5	Q06417	326 aa	Known RBP	4.01	□□□□□ -1.77
CDC55	YGL190C	CCC2	P38995	1004 aa		4	□□□□□ -1.77
CDC55	YGL190C	IRR1	P40541	1150 aa		4	□□□□□ -1.77
CDC55	YGL190C	SUN4	P53616	420 aa		4	□□□□□ -1.77
CDC55	YGL190C	PUS9	Q12069	462 aa		4	□□□□□ -1.77
CDC55	YGL190C	NPC2	Q12408	173 aa		4	□□□□□ -1.77
CDC55	YGL190C	RPC82	P32349	654 aa		3.99	□□□□□ -1.77
CDC55	YGL190C	YKR078W	P36158	585 aa	Known RBP	3.99	□□□□□ -1.77
CDC55	YGL190C	SIT1	P39980	628 aa		3.99	□□□□□ -1.77
CDC55	YGL190C	STE14	P32584	239 aa		3.98	□□□□□ -1.77
CDC55	YGL190C	MSS4	P38994	779 aa		3.98	□□□□□ -1.77
CDC55	YGL190C	BUL1	P48524	976 aa		3.98	□□□□□ -1.77
CDC55	YGL190C	MSE1	P48525	536 aa		3.98	□□□□□ -1.77
CDC55	YGL190C	KIN4	Q01919	800 aa		3.98	□□□□□ -1.77
CDC55	YGL190C	SLU7	Q02775	382 aa	Known RBP	3.98	□□□□□ -1.77
CDC55	YGL190C	FMP25	Q08023	583 aa		3.98	□□□□□ -1.77
CDC55	YGL190C	UPC2	Q12151	913 aa		3.98	□□□□□ -1.77
CDC55	YGL190C	GRX1	P25373	110 aa	Known RBP	3.97	□□□□□ -1.77
CDC55	YGL190C	PMI40	P29952	429 aa	Known RBP	3.97	□□□□□ -1.77
CDC55	YGL190C	PPH3	P32345	308 aa		3.97	□□□□□ -1.77
CDC55	YGL190C	DEF1	P35732	738 aa	Known RBP	3.97	□□□□□ -1.77
CDC55	YGL190C	CHS7	P38843	316 aa		3.97	□□□□□ -1.77
CDC55	YGL190C	RAI1	P53063	387 aa	Known RBP	3.97	□□□□□ -1.77
CDC55	YGL190C	CDC48	P25694	835 aa	Known RBP	3.97	□□□□□ -1.77
CDC55	YGL190C	AAR2	P32357	355 aa	Predicted RBP	3.97	□□□□□ -1.77
CDC55	YGL190C	YRO2	P38079	344 aa		3.97	□□□□□ -1.77
CDC55	YGL190C	TOK1	P40310	691 aa		3.97	□□□□□ -1.77
CDC55	YGL190C	PSP2	P50109	593 aa	Known RBP	3.97	□□□□□ -1.77
CDC55	YGL190C	YPR196W	Q06595	470 aa		3.97	□□□□□ -1.77
CDC55	YGL190C	NOT3	P06102	836 aa	Known RBP	3.96	□□□□□ -1.78
CDC55	YGL190C	KAR4	P25583	335 aa		3.96	□□□□□ -1.78
CDC55	YGL190C	AIM21	P40563	679 aa		3.96	□□□□□ -1.78
CDC55	YGL190C	SSL1	Q04673	461 aa	Predicted RBP	3.96	□□□□□ -1.78
CDC55	YGL190C	UBX5	Q06682	500 aa		3.96	□□□□□ -1.78
CDC55	YGL190C	FBP1	P09201	348 aa		3.95	□□□□□ -1.78
CDC55	YGL190C	RPL8B	P29453	256 aa	Known RBP	3.95	□□□□□ -1.78
CDC55	YGL190C	ALR2	P43553	858 aa		3.95	□□□□□ -1.78
CDC55	YGL190C	UTP8	P53276	713 aa	Known RBP	3.95	□□□□□ -1.78
CDC55	YGL190C	PNS1	Q12412	539 aa		3.95	□□□□□ -1.78
CDC55	YGL190C	RPP2A	P05319	106 aa	Known RBP	3.94	□□□□□ -1.78
CDC55	YGL190C	PRP9	P19736	530 aa	Known RBP	3.94	□□□□□ -1.78
CDC55	YGL190C	RPD3	P32561	433 aa		3.94	□□□□□ -1.78
CDC55	YGL190C	STE13	P33894	931 aa		3.94	□□□□□ -1.78
CDC55	YGL190C	ATG19	P35193	415 aa		3.94	□□□□□ -1.78
CDC55	YGL190C	YBR284W	P38150	797 aa		3.94	□□□□□ -1.78
CDC55	YGL190C	ADE8	P04161	214 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	PFK1	P16861	987 aa	Known RBP	3.93	□□□□□ -1.78
CDC55	YGL190C	NAN1	Q02931	896 aa	Known RBP	3.93	□□□□□ -1.78
CDC55	YGL190C	LCD1	Q04377	747 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	ENB1	Q08299	606 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	YPR071W	Q12346	211 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	TOP3	P13099	656 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	MSD1	P15179	658 aa	Known RBP	3.93	□□□□□ -1.78
CDC55	YGL190C	HRR25	P29295	494 aa	Known RBP	3.93	□□□□□ -1.78
CDC55	YGL190C	IOC3	P43596	787 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	HDA1	P53973	706 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	ERG5	P54781	538 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	WRS1	Q12109	432 aa	Known RBP	3.93	□□□□□ -1.78
CDC55	YGL190C	HBN1	Q96VH4	193 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	YTA7	P40340	1379 aa		3.93	□□□□□ -1.78
CDC55	YGL190C	RAD4	P14736	754 aa		3.92	□□□□□ -1.78
CDC55	YGL190C	YHR020W	P38708	688 aa	Known RBP	3.92	□□□□□ -1.78
CDC55	YGL190C	TRM13	Q12383	476 aa		3.92	□□□□□ -1.78

Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms