RNA–Protein interactions for RNA: YER058W

PET117, Transcript of Protein required for assembly of cytochrome c oxidase, yeastyeast

Gene PET117, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PET117YER058W TRM11Q12463 433 aa7.75□□□□□ -1.17
PET117YER058W RPS6AP0CX37 236 aaKnown RBP7.74□□□□□ -1.17
PET117YER058W RPS6BP0CX38 236 aaPredicted RBP7.74□□□□□ -1.17
PET117YER058W SSB1P11484 613 aaKnown RBP7.74□□□□□ -1.17
PET117YER058W CDC48P25694 835 aaKnown RBP7.74□□□□□ -1.17
PET117YER058W MNN4P36044 1178 aa7.74□□□□□ -1.17
PET117YER058W AVT3P36062 692 aa7.74□□□□□ -1.17
PET117YER058W PGM2P37012 569 aaKnown RBP7.74□□□□□ -1.17
PET117YER058W SSB2P40150 613 aaKnown RBP7.74□□□□□ -1.17
PET117YER058W SMC3P47037 1230 aa7.74□□□□□ -1.17
PET117YER058W STR2P47164 639 aa7.74□□□□□ -1.17
PET117YER058W GIR2Q03768 265 aaPredicted RBP7.74□□□□□ -1.17
PET117YER058W YMR321CQ04898 105 aa7.74□□□□□ -1.17
PET117YER058W HMI1Q12039 706 aa7.74□□□□□ -1.17
PET117YER058W YLL058WQ12198 575 aa7.74□□□□□ -1.17
PET117YER058W SWI6P09959 803 aa7.73□□□□□ -1.17
PET117YER058W PRE10P21242 288 aaKnown RBP RIP-Chip data7.73□□□□□ -1.17not detected
PET117YER058W DAL7P21826 554 aa7.73□□□□□ -1.17
PET117YER058W TRK2P28584 889 aa7.73□□□□□ -1.17
PET117YER058W RME1P32338 300 aaKnown RBP7.73□□□□□ -1.17
PET117YER058W COT1P32798 439 aa7.73□□□□□ -1.17
PET117YER058W MFT1P33441 392 aaKnown RBP7.73□□□□□ -1.17
PET117YER058W RPC25P35718 212 aa7.73□□□□□ -1.17
PET117YER058W SHM1P37292 490 aaPredicted RBP7.73□□□□□ -1.17
PET117YER058W VFA1P40080 203 aa7.73□□□□□ -1.17
PET117YER058W CAF130P53280 1122 aaPredicted RBP7.73□□□□□ -1.17
PET117YER058W ALF1P53904 254 aa7.73□□□□□ -1.17
PET117YER058W ARK1P53974 638 aa7.73□□□□□ -1.17
PET117YER058W ROD1Q02805 837 aa7.73□□□□□ -1.17
PET117YER058W RLP24Q07915 199 aaKnown RBP7.73□□□□□ -1.17
PET117YER058W RRP6Q12149 733 aaKnown RBP7.73□□□□□ -1.17
PET117YER058W SRF1Q12516 437 aa7.73□□□□□ -1.17
PET117YER058W YUR1P26725 428 aa7.72□□□□□ -1.17
PET117YER058W KTR2P33550 425 aa7.72□□□□□ -1.17
PET117YER058W MNR2P35724 969 aa7.72□□□□□ -1.17
PET117YER058W RTT107P38850 1070 aa7.72□□□□□ -1.17
PET117YER058W SMC2P38989 1170 aaKnown RBP7.72□□□□□ -1.17
PET117YER058W FIG4P42837 879 aa7.72□□□□□ -1.17
PET117YER058W HFM1P51979 1187 aa7.72□□□□□ -1.17
PET117YER058W VPS38Q05919 439 aa7.72□□□□□ -1.17
PET117YER058W GPI13Q07830 1017 aa7.72□□□□□ -1.17
PET117YER058W NOC3Q07896 663 aaPredicted RBP7.72□□□□□ -1.17
PET117YER058W NEW1Q08972 1196 aaKnown RBP7.72□□□□□ -1.17
PET117YER058W ATG9Q12142 997 aa7.72□□□□□ -1.17
PET117YER058W YEL1P34225 687 aa7.71□□□□□ -1.18
PET117YER058W UBP5P39944 805 aa7.71□□□□□ -1.18
PET117YER058W YAP5P40574 245 aa7.71□□□□□ -1.18
PET117YER058W JSN1P47135 1091 aaKnown RBP RIP-Chip data7.71□□□□□ -1.18not detected
PET117YER058W ERG5P54781 538 aa7.71□□□□□ -1.18
PET117YER058W YML020WQ03722 664 aa7.71□□□□□ -1.18
PET117YER058W UTP5Q04177 643 aaKnown RBP7.71□□□□□ -1.18
PET117YER058W DON1Q05610 365 aa7.71□□□□□ -1.18
PET117YER058W COQ9Q05779 260 aa7.71□□□□□ -1.18
PET117YER058W YPR078CQ06813 372 aa7.71□□□□□ -1.18
PET117YER058W APL4Q12028 832 aa7.71□□□□□ -1.18
PET117YER058W ICL2Q12031 575 aa7.71□□□□□ -1.18
PET117YER058W CWC2Q12046 339 aaPredicted RBP7.71□□□□□ -1.18
PET117YER058W OSW2Q12202 724 aa7.71□□□□□ -1.18
PET117YER058W DED1P06634 604 aaKnown RBP7.7□□□□□ -1.18
PET117YER058W POX1P13711 748 aa7.7□□□□□ -1.18
PET117YER058W CHS2P14180 963 aa7.7□□□□□ -1.18
PET117YER058W SSD1P24276 1250 aaKnown RBP RIP-Chip data7.7□□□□□ -1.18not detected
PET117YER058W NAM7P30771 971 aaKnown RBP7.7□□□□□ -1.18
PET117YER058W EFT1P32324 842 aaKnown RBP7.7□□□□□ -1.18
PET117YER058W IRE1P32361 1115 aa7.7□□□□□ -1.18
PET117YER058W GPT2P36148 743 aa7.7□□□□□ -1.18
PET117YER058W EAF5P39995 279 aa7.7□□□□□ -1.18
PET117YER058W SDS3P40505 327 aa7.7□□□□□ -1.18
PET117YER058W RPS7BP48164 190 aaKnown RBP7.7□□□□□ -1.18
PET117YER058W PSP2P50109 593 aaKnown RBP7.7□□□□□ -1.18
PET117YER058W SHE10P53075 577 aa7.7□□□□□ -1.18
PET117YER058W TAM41P53230 385 aa7.7□□□□□ -1.18
PET117YER058W RTT102P53330 157 aa7.7□□□□□ -1.18
PET117YER058W OPY2Q06810 360 aa7.7□□□□□ -1.18
PET117YER058W MLH2Q07980 695 aa7.7□□□□□ -1.18
PET117YER058W HFI1Q12060 488 aa7.7□□□□□ -1.18
PET117YER058W FAL1Q12099 399 aaKnown RBP7.7□□□□□ -1.18
PET117YER058W HIF1Q12373 385 aa7.7□□□□□ -1.18
PET117YER058W TOM1Q03280 3268 aa7.69□□□□□ -1.18
PET117YER058W SNA3P14359 133 aa7.69□□□□□ -1.18
PET117YER058W SEC23P15303 768 aaKnown RBP7.69□□□□□ -1.18
PET117YER058W VMA1P17255 1071 aaKnown RBP7.69□□□□□ -1.18
PET117YER058W UBC1P21734 215 aaKnown RBP7.69□□□□□ -1.18
PET117YER058W GUA1P38625 525 aaKnown RBP7.69□□□□□ -1.18
PET117YER058W CAJ1P39101 391 aa7.69□□□□□ -1.18
PET117YER058W LCB2P40970 561 aa7.69□□□□□ -1.18
PET117YER058W OSW7P43611 510 aa7.69□□□□□ -1.18
PET117YER058W TIM8P57744 87 aa7.69□□□□□ -1.18
PET117YER058W VTC3Q02725 835 aa7.69□□□□□ -1.18
PET117YER058W UME1Q03010 460 aa7.69□□□□□ -1.18
PET117YER058W YLR297WQ05899 129 aa7.69□□□□□ -1.18
PET117YER058W IES4Q08561 116 aa7.69□□□□□ -1.18
PET117YER058W SCP160P06105 1222 aaKnown RBP RIP-Chip data7.68□□□□□ -1.18not detected
PET117YER058W MTF2P10849 440 aa7.68□□□□□ -1.18
PET117YER058W AFT1P22149 690 aa7.68□□□□□ -1.18
PET117YER058W DPH2P32461 534 aa7.68□□□□□ -1.18
PET117YER058W MUD1P32605 298 aaKnown RBP7.68□□□□□ -1.18
PET117YER058W NIP100P33420 868 aa7.68□□□□□ -1.18
PET117YER058W ERC1P38767 581 aa7.68□□□□□ -1.18
PET117YER058W NPP2P39997 493 aa7.68□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 43.9 ms