RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	UBP13	P38187	747 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	CTM1	P38818	585 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	VPS75	P53853	264 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	GPI13	Q07830	1017 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	MED1	Q12321	566 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	PDC1	P06169	563 aa	Known RBP	7.97	□□□□□ -1.13
SKP1	YDR328C	PHO8	P11491	566 aa		7.97	□□□□□ -1.13
SKP1	YDR328C	SPO11	P23179	398 aa		7.97	□□□□□ -1.13
SKP1	YDR328C	DBP1	P24784	617 aa	Known RBP	7.97	□□□□□ -1.13
SKP1	YDR328C	RPC53	P25441	422 aa		7.97	□□□□□ -1.13
SKP1	YDR328C	NAM7	P30771	971 aa	Known RBP	7.97	□□□□□ -1.13
SKP1	YDR328C	MRF1	P30775	413 aa	Predicted RBP	7.97	□□□□□ -1.13
SKP1	YDR328C	EFT1	P32324	842 aa	Known RBP	7.97	□□□□□ -1.13
SKP1	YDR328C	BCS1	P32839	456 aa		7.97	□□□□□ -1.13
SKP1	YDR328C	MNN4	P36044	1178 aa		7.97	□□□□□ -1.13
SKP1	YDR328C	EBP2	P36049	427 aa	Known RBP	7.97	□□□□□ -1.13
SKP1	YDR328C	KSP1	P38691	1029 aa	Known RBP	7.97	□□□□□ -1.13
SKP1	YDR328C	MIP6	P38760	659 aa	Known RBP	7.97	□□□□□ -1.13
SKP1	YDR328C	ERC1	P38767	581 aa		7.97	□□□□□ -1.13
SKP1	YDR328C	PSF2	P40359	213 aa		7.97	□□□□□ -1.13
SKP1	YDR328C	AIM21	P40563	679 aa		7.97	□□□□□ -1.13
SKP1	YDR328C	AVT1	P47082	602 aa		7.97	□□□□□ -1.13
SKP1	YDR328C	RIF1	P29539	1916 aa		7.96	□□□□□ -1.13
SKP1	YDR328C	RPS6A	P0CX37	236 aa	Known RBP	7.96	□□□□□ -1.14
SKP1	YDR328C	RPS6B	P0CX38	236 aa	Predicted RBP	7.96	□□□□□ -1.14
SKP1	YDR328C	MAS2	P11914	482 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	UBC1	P21734	215 aa	Known RBP	7.96	□□□□□ -1.14
SKP1	YDR328C	MSH3	P25336	1018 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	IRE1	P32361	1115 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	EFM2	P38347	419 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	MGA2	P40578	1113 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	LCB2	P40970	561 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	STR2	P47164	639 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	CCM1	P48237	864 aa	Predicted RBP	7.96	□□□□□ -1.14
SKP1	YDR328C	TAM41	P53230	385 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	BRE5	P53741	515 aa	Known RBP	7.96	□□□□□ -1.14
SKP1	YDR328C	YML020W	Q03722	664 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	NOC3	Q07896	663 aa	Predicted RBP	7.96	□□□□□ -1.14
SKP1	YDR328C	SUT2	Q12286	268 aa		7.96	□□□□□ -1.14
SKP1	YDR328C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	7.95	□□□□□ -1.14	not detected
SKP1	YDR328C	SEC65	P29478	273 aa		7.95	□□□□□ -1.14
SKP1	YDR328C	VPS35	P34110	944 aa		7.95	□□□□□ -1.14
SKP1	YDR328C	RPC25	P35718	212 aa		7.95	□□□□□ -1.14
SKP1	YDR328C	EAF5	P39995	279 aa		7.95	□□□□□ -1.14
SKP1	YDR328C	RRD1	P40454	393 aa	Known RBP	7.95	□□□□□ -1.14
SKP1	YDR328C	SKP2	P42843	763 aa		7.95	□□□□□ -1.14
SKP1	YDR328C	FYV8	P46949	817 aa	Known RBP	7.95	□□□□□ -1.14
SKP1	YDR328C	PSP2	P50109	593 aa	Known RBP	7.95	□□□□□ -1.14
SKP1	YDR328C	HFM1	P51979	1187 aa		7.95	□□□□□ -1.14
SKP1	YDR328C	RTT102	P53330	157 aa		7.95	□□□□□ -1.14
SKP1	YDR328C	SPO75	Q07798	868 aa		7.95	□□□□□ -1.14
SKP1	YDR328C	IES4	Q08561	116 aa		7.95	□□□□□ -1.14
SKP1	YDR328C	CDC53	Q12018	815 aa	Known RBP	7.95	□□□□□ -1.14
SKP1	YDR328C	FAL1	Q12099	399 aa	Known RBP	7.95	□□□□□ -1.14
SKP1	YDR328C	CYC8	P14922	966 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	APL1	P27351	700 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	SMY2	P32909	740 aa	Known RBP	7.94	□□□□□ -1.14
SKP1	YDR328C	GPT2	P36148	743 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	SPT8	P38915	602 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	AFG3	P39925	761 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	FIG4	P42837	879 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	YJR107W	P47145	328 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	ULP1	Q02724	621 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	MSC2	Q03455	724 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	ATG11	Q12527	1178 aa		7.94	□□□□□ -1.14
SKP1	YDR328C	SSB1	P11484	613 aa	Known RBP	7.93	□□□□□ -1.14
SKP1	YDR328C	SNA3	P14359	133 aa		7.93	□□□□□ -1.14
SKP1	YDR328C	DPH2	P32461	534 aa		7.93	□□□□□ -1.14
SKP1	YDR328C	RTT107	P38850	1070 aa		7.93	□□□□□ -1.14
SKP1	YDR328C	SSB2	P40150	613 aa	Known RBP	7.93	□□□□□ -1.14
SKP1	YDR328C	YNL146W	P53906	100 aa		7.93	□□□□□ -1.14
SKP1	YDR328C	DAK1	P54838	584 aa	Known RBP	7.93	□□□□□ -1.14
SKP1	YDR328C	DON1	Q05610	365 aa		7.93	□□□□□ -1.14
SKP1	YDR328C	RLP24	Q07915	199 aa	Known RBP	7.93	□□□□□ -1.14
SKP1	YDR328C	CWC2	Q12046	339 aa	Predicted RBP	7.93	□□□□□ -1.14
SKP1	YDR328C	AFT1	P22149	690 aa		7.92	□□□□□ -1.14
SKP1	YDR328C	GUA1	P38625	525 aa	Known RBP	7.92	□□□□□ -1.14
SKP1	YDR328C	VFA1	P40080	203 aa		7.92	□□□□□ -1.14
SKP1	YDR328C	JJJ3	P47138	172 aa		7.92	□□□□□ -1.14
SKP1	YDR328C	ENV11	P53246	860 aa		7.92	□□□□□ -1.14
SKP1	YDR328C	VTC3	Q02725	835 aa		7.92	□□□□□ -1.14
SKP1	YDR328C	OSW2	Q12202	724 aa		7.92	□□□□□ -1.14
SKP1	YDR328C	HIF1	Q12373	385 aa		7.92	□□□□□ -1.14
SKP1	YDR328C	MDM20	Q12387	796 aa	Known RBP	7.92	□□□□□ -1.14
SKP1	YDR328C	YOR131C	Q12486	218 aa		7.92	□□□□□ -1.14
SKP1	YDR328C	CHS2	P14180	963 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	KTR2	P33550	425 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	ACF4	P47129	309 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	SHE10	P53075	577 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	TIM8	P57744	87 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	CUS1	Q02554	436 aa	Predicted RBP	7.91	□□□□□ -1.14
SKP1	YDR328C	GIR2	Q03768	265 aa	Predicted RBP	7.91	□□□□□ -1.14
SKP1	YDR328C	ECM7	Q06200	448 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	MLH2	Q07980	695 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	PLP2	Q12017	286 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	APL4	Q12028	832 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	HMI1	Q12039	706 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	HFI1	Q12060	488 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	ATG9	Q12142	997 aa		7.91	□□□□□ -1.14
SKP1	YDR328C	RTP1	Q12751	981 aa		7.91	□□□□□ -1.14

Retrieved 100 of 5,963 RNA–protein pairs in 40.8 ms