RNA–Protein interactions for RNA: YDR228C

PCF11, Transcript of mRNA 3' end processing factor, yeastyeast

Gene PCF11, Length 1,881 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCF11YDR228C VBA5P36172 582 aa3.31□□□□□ -1.88
PCF11YDR228C YKE2P52553 114 aa3.31□□□□□ -1.88
PCF11YDR228C NCS6P53088 359 aa3.31□□□□□ -1.88
PCF11YDR228C OPI10Q08202 246 aa3.31□□□□□ -1.88
PCF11YDR228C ENA1P13587 1091 aa3.3□□□□□ -1.88
PCF11YDR228C ATG19P35193 415 aa3.3□□□□□ -1.88
PCF11YDR228C YKL069WP36088 180 aa3.3□□□□□ -1.88
PCF11YDR228C YKR078WP36158 585 aaKnown RBP3.3□□□□□ -1.88
PCF11YDR228C YBR238CP38330 731 aaKnown RBP3.3□□□□□ -1.88
PCF11YDR228C SAH1P39954 449 aaKnown RBP3.3□□□□□ -1.88
PCF11YDR228C IOC3P43596 787 aa3.3□□□□□ -1.88
PCF11YDR228C GYP7P48365 746 aa3.3□□□□□ -1.88
PCF11YDR228C ENA2Q01896 1091 aa3.3□□□□□ -1.88
PCF11YDR228C SRP1Q02821 542 aaKnown RBP3.3□□□□□ -1.88
PCF11YDR228C URN1Q06525 465 aaKnown RBP3.3□□□□□ -1.88
PCF11YDR228C FAL1Q12099 399 aaKnown RBP3.3□□□□□ -1.88
PCF11YDR228C ENA5Q12691 1091 aa3.3□□□□□ -1.88
PCF11YDR228C SRP101P32916 621 aa3.3□□□□□ -1.88
PCF11YDR228C MSS4P38994 779 aa3.3□□□□□ -1.88
PCF11YDR228C MAD1P40957 749 aa3.3□□□□□ -1.88
PCF11YDR228C SFB2P53953 876 aa3.3□□□□□ -1.88
PCF11YDR228C LAS17Q12446 633 aa3.3□□□□□ -1.88
PCF11YDR228C AFR1P33304 620 aa3.29□□□□□ -1.88
PCF11YDR228C TSL1P38427 1098 aaKnown RBP3.29□□□□□ -1.88
PCF11YDR228C CTF4Q01454 927 aa3.29□□□□□ -1.88
PCF11YDR228C KIN4Q01919 800 aa3.29□□□□□ -1.88
PCF11YDR228C ENB1Q08299 606 aa3.29□□□□□ -1.88
PCF11YDR228C AIM21P40563 679 aa3.28□□□□□ -1.88
PCF11YDR228C PSP2P50109 593 aaKnown RBP3.28□□□□□ -1.88
PCF11YDR228C GUP2Q08929 609 aa3.28□□□□□ -1.88
PCF11YDR228C STE14P32584 239 aa3.28□□□□□ -1.88
PCF11YDR228C MRP8P35719 219 aa3.28□□□□□ -1.88
PCF11YDR228C CCC2P38995 1004 aa3.28□□□□□ -1.88
PCF11YDR228C SIT1P39980 628 aa3.28□□□□□ -1.88
PCF11YDR228C BUL1P48524 976 aa3.28□□□□□ -1.88
PCF11YDR228C BUL2Q03758 920 aaKnown RBP3.28□□□□□ -1.88
PCF11YDR228C GIS1Q03833 894 aa3.28□□□□□ -1.88
PCF11YDR228C DUS3Q06053 668 aaKnown RBP3.28□□□□□ -1.88
PCF11YDR228C JIP5Q06214 492 aaPredicted RBP3.28□□□□□ -1.88
PCF11YDR228C UPC2Q12151 913 aa3.28□□□□□ -1.88
PCF11YDR228C NPC2Q12408 173 aa3.28□□□□□ -1.88
PCF11YDR228C NPP1P25353 742 aa3.27□□□□□ -1.89
PCF11YDR228C CWC24P53769 259 aa3.27□□□□□ -1.89
PCF11YDR228C WHI4Q07655 649 aaKnown RBP3.27□□□□□ -1.89
PCF11YDR228C TAD3Q9URQ3 322 aa3.27□□□□□ -1.89
PCF11YDR228C FBP1P09201 348 aa3.26□□□□□ -1.89
PCF11YDR228C PFK1P16861 987 aaKnown RBP3.26□□□□□ -1.89
PCF11YDR228C STE5P32917 917 aa3.26□□□□□ -1.89
PCF11YDR228C PBY1P38254 753 aa3.26□□□□□ -1.89
PCF11YDR228C YER158CP40095 573 aa3.26□□□□□ -1.89
PCF11YDR228C PRI2P20457 528 aa3.26□□□□□ -1.89
PCF11YDR228C KAR4P25583 335 aa3.26□□□□□ -1.89
PCF11YDR228C SPF1P39986 1215 aaKnown RBP3.26□□□□□ -1.89
PCF11YDR228C IRR1P40541 1150 aa3.26□□□□□ -1.89
PCF11YDR228C RAI1P53063 387 aaKnown RBP3.26□□□□□ -1.89
PCF11YDR228C CDC48P25694 835 aaKnown RBP3.25□□□□□ -1.89
PCF11YDR228C HBS1P32769 611 aaKnown RBP3.25□□□□□ -1.89
PCF11YDR228C SNU71P53207 620 aaKnown RBP3.25□□□□□ -1.89
PCF11YDR228C SLU7Q02775 382 aaKnown RBP3.25□□□□□ -1.89
PCF11YDR228C YDR306CQ06640 478 aa3.25□□□□□ -1.89
PCF11YDR228C RAD53P22216 821 aa3.24□□□□□ -1.89
PCF11YDR228C HRR25P29295 494 aaKnown RBP3.24□□□□□ -1.89
PCF11YDR228C PAM1P37304 830 aaKnown RBP3.24□□□□□ -1.89
PCF11YDR228C VAC8P39968 578 aa3.24□□□□□ -1.89
PCF11YDR228C PFD1P46988 109 aa3.24□□□□□ -1.89
PCF11YDR228C ALD6P54115 500 aaKnown RBP3.24□□□□□ -1.89
PCF11YDR228C ERG5P54781 538 aa3.24□□□□□ -1.89
PCF11YDR228C AIM39Q08223 395 aa3.24□□□□□ -1.89
PCF11YDR228C ADE8P04161 214 aa3.23□□□□□ -1.89
PCF11YDR228C STE13P33894 931 aa3.23□□□□□ -1.89
PCF11YDR228C NOT3P06102 836 aaKnown RBP3.22□□□□□ -1.89
PCF11YDR228C TRP4P07285 380 aaPredicted RBP3.22□□□□□ -1.89
PCF11YDR228C EFT1P32324 842 aaKnown RBP3.22□□□□□ -1.89
PCF11YDR228C PPH3P32345 308 aa3.22□□□□□ -1.89
PCF11YDR228C YPR196WQ06595 470 aa3.22□□□□□ -1.89
PCF11YDR228C AAR2P32357 355 aaPredicted RBP3.22□□□□□ -1.89
PCF11YDR228C YBR184WP38299 523 aa3.22□□□□□ -1.89
PCF11YDR228C UTP8P53276 713 aaKnown RBP3.22□□□□□ -1.89
PCF11YDR228C SSL1Q04673 461 aaPredicted RBP3.22□□□□□ -1.89
PCF11YDR228C YLR040CQ07988 224 aa3.22□□□□□ -1.89
PCF11YDR228C SED4P25365 1065 aa3.21□□□□□ -1.9
PCF11YDR228C OAR1P35731 278 aa3.21□□□□□ -1.9
PCF11YDR228C KTR4P38131 464 aa3.21□□□□□ -1.9
PCF11YDR228C MOH1P38191 138 aa3.21□□□□□ -1.9
PCF11YDR228C TOK1P40310 691 aa3.21□□□□□ -1.9
PCF11YDR228C CCM1P48237 864 aaPredicted RBP3.21□□□□□ -1.9
PCF11YDR228C HDA1P53973 706 aa3.21□□□□□ -1.9
PCF11YDR228C LCD1Q04377 747 aa3.21□□□□□ -1.9
PCF11YDR228C TDA5Q06417 326 aaKnown RBP3.21□□□□□ -1.9
PCF11YDR228C FMP25Q08023 583 aa3.21□□□□□ -1.9
PCF11YDR228C SSF2Q12153 453 aaPredicted RBP3.21□□□□□ -1.9
PCF11YDR228C PRP9P19736 530 aaKnown RBP3.2□□□□□ -1.9
PCF11YDR228C YRO2P38079 344 aa3.2□□□□□ -1.9
PCF11YDR228C ERT1P38140 529 aa3.2□□□□□ -1.9
PCF11YDR228C SDP1P40479 209 aa3.2□□□□□ -1.9
PCF11YDR228C YOL073CQ08232 322 aa3.2□□□□□ -1.9
PCF11YDR228C CTF8P38877 133 aa3.2□□□□□ -1.9
PCF11YDR228C TPO2P53283 614 aa3.2□□□□□ -1.9
PCF11YDR228C PPM2Q08282 695 aa3.2□□□□□ -1.9
PCF11YDR228C TUB3P09734 445 aaKnown RBP3.19□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 26.6 ms