RNA–Protein interactions for RNA: YDR146C

SWI5, Transcript of Transcription factor that recruits Mediator and Swi/Snf complexes, yeastyeast

Gene SWI5, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWI5YDR146C CDA1Q06702 301 aa2.54□□□□□ -2
SWI5YDR146C CYC1P00044 109 aaPredicted RBP2.54□□□□□ -2
SWI5YDR146C AAR2P32357 355 aaPredicted RBP2.54□□□□□ -2
SWI5YDR146C ELM1P32801 640 aa2.54□□□□□ -2
SWI5YDR146C YBR284WP38150 797 aa2.54□□□□□ -2
SWI5YDR146C YER158CP40095 573 aa2.54□□□□□ -2
SWI5YDR146C TPO2P53283 614 aa2.54□□□□□ -2
SWI5YDR146C PLB2Q03674 706 aa2.54□□□□□ -2
SWI5YDR146C DUS4Q06063 367 aa2.54□□□□□ -2
SWI5YDR146C GAL10P04397 699 aa2.53□□□□□ -2
SWI5YDR146C PPH3P32345 308 aa2.53□□□□□ -2
SWI5YDR146C CDC11P32458 415 aa2.53□□□□□ -2
SWI5YDR146C YRO2P38079 344 aa2.53□□□□□ -2
SWI5YDR146C NUP82P40368 713 aa2.53□□□□□ -2
SWI5YDR146C MND2P40577 368 aa2.53□□□□□ -2
SWI5YDR146C HUL4P40985 892 aa2.53□□□□□ -2
SWI5YDR146C FOL2P51601 243 aaKnown RBP2.53□□□□□ -2
SWI5YDR146C SNO2P53823 222 aa2.53□□□□□ -2
SWI5YDR146C MRPL22P53881 309 aa2.53□□□□□ -2
SWI5YDR146C RSM24Q03976 319 aa2.53□□□□□ -2
SWI5YDR146C ADY3Q07732 790 aa2.53□□□□□ -2
SWI5YDR146C OSW2Q12202 724 aa2.53□□□□□ -2
SWI5YDR146C YOR131CQ12486 218 aa2.53□□□□□ -2
SWI5YDR146C ADE8P04161 214 aa2.53□□□□□ -2.01
SWI5YDR146C KIN2P13186 1147 aaKnown RBP2.53□□□□□ -2.01
SWI5YDR146C CMP2P14747 604 aa2.53□□□□□ -2.01
SWI5YDR146C CDC48P25694 835 aaKnown RBP2.53□□□□□ -2.01
SWI5YDR146C APL1P27351 700 aa2.53□□□□□ -2.01
SWI5YDR146C NIT1P40447 199 aa2.53□□□□□ -2.01
SWI5YDR146C CCM1P48237 864 aaPredicted RBP2.53□□□□□ -2.01
SWI5YDR146C SGD1Q06132 899 aa2.53□□□□□ -2.01
SWI5YDR146C YDL124WQ07551 312 aaKnown RBP2.53□□□□□ -2.01
SWI5YDR146C ENV7Q12003 364 aa2.53□□□□□ -2.01
SWI5YDR146C YPR071WQ12346 211 aa2.53□□□□□ -2.01
SWI5YDR146C REC104P33323 182 aa2.52□□□□□ -2.01
SWI5YDR146C RRP14P36080 434 aaKnown RBP2.52□□□□□ -2.01
SWI5YDR146C LAM1P38851 1228 aa2.52□□□□□ -2.01
SWI5YDR146C GYP8P43570 497 aa2.52□□□□□ -2.01
SWI5YDR146C TY4A-JP47023 414 aa2.52□□□□□ -2.01
SWI5YDR146C VTS1Q08831 523 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
SWI5YDR146C FBP1P09201 348 aa2.51□□□□□ -2.01
SWI5YDR146C PRP6P19735 899 aaPredicted RBP2.51□□□□□ -2.01
SWI5YDR146C SCT1P32784 759 aa2.51□□□□□ -2.01
SWI5YDR146C SRP101P32916 621 aa2.51□□□□□ -2.01
SWI5YDR146C THI80P35202 319 aa2.51□□□□□ -2.01
SWI5YDR146C MEF2P39677 819 aa2.51□□□□□ -2.01
SWI5YDR146C GDH3P39708 457 aa2.51□□□□□ -2.01
SWI5YDR146C YGR012WP53206 393 aa2.51□□□□□ -2.01
SWI5YDR146C VPS62P53285 467 aa2.51□□□□□ -2.01
SWI5YDR146C YGR283CP53336 341 aaPredicted RBP2.51□□□□□ -2.01
SWI5YDR146C ALG12P53730 551 aa2.51□□□□□ -2.01
SWI5YDR146C HMI1Q12039 706 aa2.51□□□□□ -2.01
SWI5YDR146C YLR125WQ12138 136 aa2.51□□□□□ -2.01
SWI5YDR146C SOD2P00447 233 aa2.51□□□□□ -2.01
SWI5YDR146C PHO8P11491 566 aa2.51□□□□□ -2.01
SWI5YDR146C GAS1P22146 559 aaKnown RBP2.51□□□□□ -2.01
SWI5YDR146C DOM34P33309 386 aa2.51□□□□□ -2.01
SWI5YDR146C EMC3P36039 253 aa2.51□□□□□ -2.01
SWI5YDR146C NMD2P38798 1089 aaKnown RBP2.51□□□□□ -2.01
SWI5YDR146C RNH70P53331 553 aa2.51□□□□□ -2.01
SWI5YDR146C GCN5Q03330 439 aa2.51□□□□□ -2.01
SWI5YDR146C SPE1P08432 466 aa2.5□□□□□ -2.01
SWI5YDR146C HSF1P10961 833 aa2.5□□□□□ -2.01
SWI5YDR146C RNQ1P25367 405 aa2.5□□□□□ -2.01
SWI5YDR146C SPC29P33419 253 aa2.5□□□□□ -2.01
SWI5YDR146C ZRG8P40021 1076 aa2.5□□□□□ -2.01
SWI5YDR146C URM1P40554 99 aaPredicted RBP2.5□□□□□ -2.01
SWI5YDR146C OSW7P43611 510 aa2.5□□□□□ -2.01
SWI5YDR146C ALG2P43636 503 aa2.5□□□□□ -2.01
SWI5YDR146C YPL277CQ08989 487 aa2.5□□□□□ -2.01
SWI5YDR146C MDM12Q92328 271 aa2.5□□□□□ -2.01
SWI5YDR146C RPS13P05756 151 aaKnown RBP2.5□□□□□ -2.01
SWI5YDR146C NOT3P06102 836 aaKnown RBP2.5□□□□□ -2.01
SWI5YDR146C TOM70P07213 617 aaKnown RBP2.5□□□□□ -2.01
SWI5YDR146C MEF1P25039 761 aa2.5□□□□□ -2.01
SWI5YDR146C MSH2P25847 964 aa2.5□□□□□ -2.01
SWI5YDR146C STE13P33894 931 aa2.5□□□□□ -2.01
SWI5YDR146C AIM3P38266 947 aaKnown RBP2.5□□□□□ -2.01
SWI5YDR146C MET12P46151 657 aa2.5□□□□□ -2.01
SWI5YDR146C RAI1P53063 387 aaKnown RBP2.5□□□□□ -2.01
SWI5YDR146C PRP43P53131 767 aaKnown RBP2.5□□□□□ -2.01
SWI5YDR146C RIM8P53179 542 aa2.5□□□□□ -2.01
SWI5YDR146C HDA1P53973 706 aa2.5□□□□□ -2.01
SWI5YDR146C ATP25Q03153 612 aa2.5□□□□□ -2.01
SWI5YDR146C ROT1Q03691 256 aa2.5□□□□□ -2.01
SWI5YDR146C TPO1Q07824 586 aa2.5□□□□□ -2.01
SWI5YDR146C MPH2P0CD99 609 aa2.49□□□□□ -2.01
SWI5YDR146C CDC20P26309 610 aa2.49□□□□□ -2.01
SWI5YDR146C URA1P28272 314 aaPredicted RBP2.49□□□□□ -2.01
SWI5YDR146C STE14P32584 239 aa2.49□□□□□ -2.01
SWI5YDR146C CHA4P43634 648 aa2.49□□□□□ -2.01
SWI5YDR146C AVT1P47082 602 aa2.49□□□□□ -2.01
SWI5YDR146C HXT16P47185 567 aa2.49□□□□□ -2.01
SWI5YDR146C HSV2P50079 448 aaPredicted RBP2.49□□□□□ -2.01
SWI5YDR146C DOS2P54858 310 aa2.49□□□□□ -2.01
SWI5YDR146C GPB1Q08886 897 aa2.49□□□□□ -2.01
SWI5YDR146C PRE10P21242 288 aaKnown RBP RIP-Chip data2.48□□□□□ -2.01not detected
SWI5YDR146C YAP6Q03935 383 aa2.48□□□□□ -2.01
SWI5YDR146C YPR196WQ06595 470 aa2.48□□□□□ -2.01
SWI5YDR146C NOP12Q08208 459 aaKnown RBP2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 7 ms