RNA–Protein interactions for RNA: YDR077W

SED1, Transcript of Major stress-induced structural GPI-cell wall glycoprotein, yeastyeast

Gene SED1, Length 1,017 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SED1YDR077W TY3A-GQ12173 290 aa10.4□□□□□ -0.74
SED1YDR077W TY3A-IQ99219 290 aa10.4□□□□□ -0.74
SED1YDR077W PHO8P11491 566 aa10.39□□□□□ -0.75
SED1YDR077W DBP5P20449 482 aaKnown RBP10.39□□□□□ -0.75
SED1YDR077W RRP43P25359 394 aaPredicted RBP10.39□□□□□ -0.75
SED1YDR077W CDC48P25694 835 aaKnown RBP10.39□□□□□ -0.75
SED1YDR077W UBP13P38187 747 aa10.39□□□□□ -0.75
SED1YDR077W HFM1P51979 1187 aa10.39□□□□□ -0.75
SED1YDR077W ALF1P53904 254 aa10.39□□□□□ -0.75
SED1YDR077W ERG5P54781 538 aa10.39□□□□□ -0.75
SED1YDR077W DUS4Q06063 367 aa10.39□□□□□ -0.75
SED1YDR077W SMC5Q08204 1093 aa10.39□□□□□ -0.75
SED1YDR077W PLP2Q12017 286 aa10.39□□□□□ -0.75
SED1YDR077W DAL7P21826 554 aa10.38□□□□□ -0.75
SED1YDR077W TRK2P28584 889 aa10.38□□□□□ -0.75
SED1YDR077W YSC83P32792 385 aa10.38□□□□□ -0.75
SED1YDR077W TFC4P33339 1025 aa10.38□□□□□ -0.75
SED1YDR077W ASH1P34233 588 aa10.38□□□□□ -0.75
SED1YDR077W ATG19P35193 415 aa10.38□□□□□ -0.75
SED1YDR077W PGM2P37012 569 aaKnown RBP10.38□□□□□ -0.75
SED1YDR077W APE3P37302 537 aaKnown RBP10.38□□□□□ -0.75
SED1YDR077W RSC30P38781 883 aa10.38□□□□□ -0.75
SED1YDR077W ATG3P40344 310 aa10.38□□□□□ -0.75
SED1YDR077W SPR3P41901 512 aa10.38□□□□□ -0.75
SED1YDR077W SMC3P47037 1230 aa10.38□□□□□ -0.75
SED1YDR077W VPS53P47061 822 aa10.38□□□□□ -0.75
SED1YDR077W COS5P47187 383 aa10.38□□□□□ -0.75
SED1YDR077W GIR2Q03768 265 aaPredicted RBP10.38□□□□□ -0.75
SED1YDR077W YOL098CQ12496 1037 aa10.38□□□□□ -0.75
SED1YDR077W SWI6P09959 803 aa10.37□□□□□ -0.75
SED1YDR077W VPS35P34110 944 aa10.37□□□□□ -0.75
SED1YDR077W TVP38P36164 337 aa10.37□□□□□ -0.75
SED1YDR077W PCH2P38126 564 aa10.37□□□□□ -0.75
SED1YDR077W CAJ1P39101 391 aa10.37□□□□□ -0.75
SED1YDR077W UME1Q03010 460 aa10.37□□□□□ -0.75
SED1YDR077W UTP5Q04177 643 aaKnown RBP10.37□□□□□ -0.75
SED1YDR077W NEW1Q08972 1196 aaKnown RBP10.37□□□□□ -0.75
SED1YDR077W MTF2P10849 440 aa10.36□□□□□ -0.75
SED1YDR077W SLX5P32828 619 aaKnown RBP10.36□□□□□ -0.75
SED1YDR077W SMC2P38989 1170 aaKnown RBP10.36□□□□□ -0.75
SED1YDR077W UBP5P39944 805 aa10.36□□□□□ -0.75
SED1YDR077W MDR1P53258 950 aa10.36□□□□□ -0.75
SED1YDR077W ARK1P53974 638 aa10.36□□□□□ -0.75
SED1YDR077W YPR078CQ06813 372 aa10.36□□□□□ -0.75
SED1YDR077W SEC23P15303 768 aaKnown RBP10.35□□□□□ -0.75
SED1YDR077W PET123P17558 318 aa10.35□□□□□ -0.75
SED1YDR077W RGT1P32862 1170 aa10.35□□□□□ -0.75
SED1YDR077W XRS2P33301 854 aa10.35□□□□□ -0.75
SED1YDR077W KTR2P33550 425 aa10.35□□□□□ -0.75
SED1YDR077W YEL1P34225 687 aa10.35□□□□□ -0.75
SED1YDR077W SHQ1P40486 507 aaPredicted RBP10.35□□□□□ -0.75
SED1YDR077W YAP5P40574 245 aa10.35□□□□□ -0.75
SED1YDR077W APT1P49435 187 aaKnown RBP10.35□□□□□ -0.75
SED1YDR077W ATG1P53104 897 aa10.35□□□□□ -0.75
SED1YDR077W HOS3Q02959 697 aaKnown RBP10.35□□□□□ -0.75
SED1YDR077W OPY2Q06810 360 aa10.35□□□□□ -0.75
SED1YDR077W NOC3Q07896 663 aaPredicted RBP10.35□□□□□ -0.75
SED1YDR077W MLH2Q07980 695 aa10.35□□□□□ -0.75
SED1YDR077W YLL058WQ12198 575 aa10.35□□□□□ -0.75
SED1YDR077W SCP160P06105 1222 aaKnown RBP RIP-Chip data10.34□□□□□ -0.75 RIP-Chip
SED1YDR077W SPO12P17123 173 aa10.34□□□□□ -0.75
SED1YDR077W NIP100P33420 868 aa10.34□□□□□ -0.75
SED1YDR077W DBP7P36120 742 aaKnown RBP10.34□□□□□ -0.75
SED1YDR077W BCH2P36122 765 aa10.34□□□□□ -0.75
SED1YDR077W YEL025CP39991 1188 aa10.34□□□□□ -0.75
SED1YDR077W IES1P43579 692 aa10.34□□□□□ -0.75
SED1YDR077W YMR321CQ04898 105 aa10.34□□□□□ -0.75
SED1YDR077W GPI13Q07830 1017 aa10.34□□□□□ -0.75
SED1YDR077W RLP24Q07915 199 aaKnown RBP10.34□□□□□ -0.75
SED1YDR077W MSC6Q08818 692 aaKnown RBP10.34□□□□□ -0.75
SED1YDR077W SSD1P24276 1250 aaKnown RBP RIP-Chip data10.33□□□□□ -0.76not detected
SED1YDR077W STO1P34160 861 aaKnown RBP10.33□□□□□ -0.76
SED1YDR077W FIG4P42837 879 aa10.33□□□□□ -0.76
SED1YDR077W CAF130P53280 1122 aaPredicted RBP10.33□□□□□ -0.76
SED1YDR077W ROD1Q02805 837 aa10.33□□□□□ -0.76
SED1YDR077W DON1Q05610 365 aa10.33□□□□□ -0.76
SED1YDR077W FAL1Q12099 399 aaKnown RBP10.33□□□□□ -0.76
SED1YDR077W TRM11Q12463 433 aa10.33□□□□□ -0.76
SED1YDR077W PPR1P07272 904 aaPredicted RBP10.32□□□□□ -0.76
SED1YDR077W CHS2P14180 963 aa10.32□□□□□ -0.76
SED1YDR077W COT1P32798 439 aa10.32□□□□□ -0.76
SED1YDR077W TIM23P32897 222 aa10.32□□□□□ -0.76
SED1YDR077W MOT2P34909 587 aaKnown RBP10.32□□□□□ -0.76
SED1YDR077W MCX1P38323 520 aaPredicted RBP10.32□□□□□ -0.76
SED1YDR077W ERC1P38767 581 aa10.32□□□□□ -0.76
SED1YDR077W TGL3P40308 642 aa10.32□□□□□ -0.76
SED1YDR077W SEC9P40357 651 aa10.32□□□□□ -0.76
SED1YDR077W AVT1P47082 602 aa10.32□□□□□ -0.76
SED1YDR077W RPS7BP48164 190 aaKnown RBP10.32□□□□□ -0.76
SED1YDR077W TAM41P53230 385 aa10.32□□□□□ -0.76
SED1YDR077W TIM8P57744 87 aa10.32□□□□□ -0.76
SED1YDR077W VPS60Q03390 229 aa10.32□□□□□ -0.76
SED1YDR077W MET7Q08645 548 aa10.32□□□□□ -0.76
SED1YDR077W NCR1Q12200 1170 aa10.32□□□□□ -0.76
SED1YDR077W PDC6P26263 563 aaKnown RBP10.31□□□□□ -0.76
SED1YDR077W ETP1P38748 585 aaKnown RBP10.31□□□□□ -0.76
SED1YDR077W EAF5P39995 279 aa10.31□□□□□ -0.76
SED1YDR077W MXR1P40029 184 aa10.31□□□□□ -0.76
SED1YDR077W SDS3P40505 327 aa10.31□□□□□ -0.76
SED1YDR077W LCB2P40970 561 aa10.31□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 80.5 ms