RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeastyeast

Gene CDC34, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC34YDR054C NDT80P38830 627 aa6.88□□□□□ -1.31
CDC34YDR054C PNT1P38969 423 aa6.88□□□□□ -1.31
CDC34YDR054C FAA3P39002 694 aa6.88□□□□□ -1.31
CDC34YDR054C ACA1P39970 489 aa6.88□□□□□ -1.31
CDC34YDR054C GIR2Q03768 265 aaPredicted RBP6.88□□□□□ -1.31
CDC34YDR054C COG8Q04632 607 aa6.88□□□□□ -1.31
CDC34YDR054C DSE3Q08729 430 aa6.88□□□□□ -1.31
CDC34YDR054C ISU2Q12056 156 aa6.88□□□□□ -1.31
CDC34YDR054C RGP1P16664 663 aa6.87□□□□□ -1.31
CDC34YDR054C URA1P28272 314 aaPredicted RBP6.87□□□□□ -1.31
CDC34YDR054C MCM4P30665 933 aaKnown RBP6.87□□□□□ -1.31
CDC34YDR054C YHR020WP38708 688 aaKnown RBP6.87□□□□□ -1.31
CDC34YDR054C RSP5P39940 809 aaKnown RBP6.87□□□□□ -1.31
CDC34YDR054C PEA2P40091 420 aa6.87□□□□□ -1.31
CDC34YDR054C CCT5P40413 562 aaKnown RBP6.87□□□□□ -1.31
CDC34YDR054C ASE1P50275 885 aa6.87□□□□□ -1.31
CDC34YDR054C PEX8P53248 589 aa6.87□□□□□ -1.31
CDC34YDR054C KRE33P53914 1056 aaKnown RBP6.87□□□□□ -1.31
CDC34YDR054C PEX29Q03370 554 aa6.87□□□□□ -1.31
CDC34YDR054C FAL1Q12099 399 aaKnown RBP6.87□□□□□ -1.31
CDC34YDR054C OSH2Q12451 1283 aa6.87□□□□□ -1.31
CDC34YDR054C PGI1P12709 554 aaKnown RBP6.86□□□□□ -1.31
CDC34YDR054C ELM1P32801 640 aa6.86□□□□□ -1.31
CDC34YDR054C GGA2P38817 585 aaKnown RBP6.86□□□□□ -1.31
CDC34YDR054C VPS45P38932 577 aa6.86□□□□□ -1.31
CDC34YDR054C RPT2P40327 437 aaKnown RBP6.86□□□□□ -1.31
CDC34YDR054C YGL138CP53122 345 aa6.86□□□□□ -1.31
CDC34YDR054C YGR125WP53273 1036 aa6.86□□□□□ -1.31
CDC34YDR054C AGE1Q04412 482 aa6.86□□□□□ -1.31
CDC34YDR054C BSC2Q05611 235 aa6.86□□□□□ -1.31
CDC34YDR054C SMD2Q06217 110 aaKnown RBP6.86□□□□□ -1.31
CDC34YDR054C CLF1Q12309 687 aaPredicted RBP6.86□□□□□ -1.31
CDC34YDR054C PTC5Q12511 572 aa6.86□□□□□ -1.31
CDC34YDR054C ERR1P0CX10 437 aa6.85□□□□□ -1.31
CDC34YDR054C ERR2P0CX11 437 aa6.85□□□□□ -1.31
CDC34YDR054C RAM1P22007 431 aa6.85□□□□□ -1.31
CDC34YDR054C PRE9P23638 258 aaKnown RBP6.85□□□□□ -1.31
CDC34YDR054C RPN12P32496 274 aa6.85□□□□□ -1.31
CDC34YDR054C SMC1P32908 1225 aa6.85□□□□□ -1.31
CDC34YDR054C PTC4P38089 393 aa6.85□□□□□ -1.31
CDC34YDR054C TOM71P38825 639 aaKnown RBP6.85□□□□□ -1.31
CDC34YDR054C RSM25P40496 264 aa6.85□□□□□ -1.31
CDC34YDR054C STR2P47164 639 aa6.85□□□□□ -1.31
CDC34YDR054C SPP1Q03012 353 aa6.85□□□□□ -1.31
CDC34YDR054C ATG16Q03818 150 aa6.85□□□□□ -1.31
CDC34YDR054C UTP4Q06679 776 aaKnown RBP6.85□□□□□ -1.31
CDC34YDR054C SPO75Q07798 868 aa6.85□□□□□ -1.31
CDC34YDR054C MPC54Q08550 464 aa6.85□□□□□ -1.31
CDC34YDR054C SLX4Q12098 748 aa6.85□□□□□ -1.31
CDC34YDR054C TMA7Q3E764 64 aaKnown RBP6.85□□□□□ -1.31
CDC34YDR054C CCP1P00431 361 aa6.84□□□□□ -1.31
CDC34YDR054C GPA1P08539 472 aa6.84□□□□□ -1.31
CDC34YDR054C KIP2P28743 706 aa6.84□□□□□ -1.31
CDC34YDR054C YER130CP39959 443 aa6.84□□□□□ -1.31
CDC34YDR054C DAS1P47005 663 aa6.84□□□□□ -1.31
CDC34YDR054C YGR053CP53234 283 aa6.84□□□□□ -1.31
CDC34YDR054C SSL2Q00578 843 aa6.84□□□□□ -1.31
CDC34YDR054C YML037CQ03703 340 aa6.84□□□□□ -1.31
CDC34YDR054C DAL4Q04895 635 aa6.84□□□□□ -1.31
CDC34YDR054C EIS1Q05050 843 aaKnown RBP6.84□□□□□ -1.31
CDC34YDR054C ENT2Q05785 613 aa6.84□□□□□ -1.31
CDC34YDR054C YOR378WQ08902 515 aa6.84□□□□□ -1.31
CDC34YDR054C CEX1Q12453 761 aa6.84□□□□□ -1.31
CDC34YDR054C DDP1Q99321 188 aaKnown RBP6.84□□□□□ -1.31
CDC34YDR054C PDC1P06169 563 aaKnown RBP6.83□□□□□ -1.32
CDC34YDR054C FBP1P09201 348 aa6.83□□□□□ -1.32
CDC34YDR054C YKL069WP36088 180 aa6.83□□□□□ -1.32
CDC34YDR054C RFT1P38206 574 aaPredicted RBP6.83□□□□□ -1.32
CDC34YDR054C RKM3P38222 552 aa6.83□□□□□ -1.32
CDC34YDR054C NPR3P38742 1146 aa6.83□□□□□ -1.32
CDC34YDR054C CCT3P39077 534 aaKnown RBP6.83□□□□□ -1.32
CDC34YDR054C PES4P39684 611 aa6.83□□□□□ -1.32
CDC34YDR054C YIL089WP40500 205 aa6.83□□□□□ -1.32
CDC34YDR054C LYS14P40971 790 aa6.83□□□□□ -1.32
CDC34YDR054C YJR115WP47152 169 aa6.83□□□□□ -1.32
CDC34YDR054C YPT11P48559 417 aa6.83□□□□□ -1.32
CDC34YDR054C KXD1P53158 218 aa6.83□□□□□ -1.32
CDC34YDR054C RSC1P53236 928 aa6.83□□□□□ -1.32
CDC34YDR054C ESF2P53743 316 aaKnown RBP6.83□□□□□ -1.32
CDC34YDR054C VIP1Q06685 1146 aaKnown RBP6.83□□□□□ -1.32
CDC34YDR054C NTG2Q08214 380 aa6.83□□□□□ -1.32
CDC34YDR054C SWI5P08153 709 aa6.82□□□□□ -1.32
CDC34YDR054C RPL8AP17076 256 aaKnown RBP6.82□□□□□ -1.32
CDC34YDR054C PHO88P38264 188 aaPredicted RBP6.82□□□□□ -1.32
CDC34YDR054C STT3P39007 718 aaKnown RBP6.82□□□□□ -1.32
CDC34YDR054C CIT3P43635 486 aa6.82□□□□□ -1.32
CDC34YDR054C HLJ1P48353 224 aa6.82□□□□□ -1.32
CDC34YDR054C YOR296WQ08748 1289 aa6.82□□□□□ -1.32
CDC34YDR054C TMA17Q12513 150 aa6.82□□□□□ -1.32
CDC34YDR054C NBL1Q3E7Y6 73 aa6.82□□□□□ -1.32
CDC34YDR054C PHR1P05066 565 aaKnown RBP RIP-Chip data6.81□□□□□ -1.32not detected
CDC34YDR054C SAM1P10659 382 aaKnown RBP6.81□□□□□ -1.32
CDC34YDR054C THR4P16120 514 aaKnown RBP6.81□□□□□ -1.32
CDC34YDR054C ALG1P16661 449 aa6.81□□□□□ -1.32
CDC34YDR054C HSP60P19882 572 aaKnown RBP6.81□□□□□ -1.32
CDC34YDR054C VAC17P25591 423 aa6.81□□□□□ -1.32
CDC34YDR054C MSH2P25847 964 aa6.81□□□□□ -1.32
CDC34YDR054C GCD11P32481 527 aaKnown RBP6.81□□□□□ -1.32
CDC34YDR054C SAS3P34218 831 aa6.81□□□□□ -1.32
CDC34YDR054C TIF11P38912 153 aaKnown RBP6.81□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 18.3 ms