RNA–Protein interactions for RNA: YDR008C

YDR008C, Transcript of Dubious open reading frame, yeast

Gene YDR008C, Length 351 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YDR008C	YDR008C	TAH11	P47112	604 aa		4.79	□□□□□ -1.64
YDR008C	YDR008C	PSP2	P50109	593 aa	Known RBP	4.79	□□□□□ -1.64
YDR008C	YDR008C	SEC5	P89102	971 aa		4.79	□□□□□ -1.64
YDR008C	YDR008C	UPC2	Q12151	913 aa		4.79	□□□□□ -1.64
YDR008C	YDR008C	HSF1	P10961	833 aa		4.78	□□□□□ -1.64
YDR008C	YDR008C	YKL151C	P36059	337 aa		4.78	□□□□□ -1.64
YDR008C	YDR008C	MRPS18	P42847	217 aa		4.77	□□□□□ -1.65
YDR008C	YDR008C	SCS3	P53012	380 aa		4.77	□□□□□ -1.65
YDR008C	YDR008C	GCR1	P07261	785 aa		4.76	□□□□□ -1.65
YDR008C	YDR008C	MCD1	Q12158	566 aa		4.76	□□□□□ -1.65
YDR008C	YDR008C	STE14	P32584	239 aa		4.75	□□□□□ -1.65
YDR008C	YDR008C	RER2	P35196	286 aa		4.75	□□□□□ -1.65
YDR008C	YDR008C	SPP382	Q06411	708 aa	Predicted RBP	4.75	□□□□□ -1.65
YDR008C	YDR008C	GFA1	P14742	717 aa	Known RBP	4.74	□□□□□ -1.65
YDR008C	YDR008C	VPS73	P53142	486 aa	Known RBP	4.74	□□□□□ -1.65
YDR008C	YDR008C	FRE5	Q08908	694 aa		4.74	□□□□□ -1.65
YDR008C	YDR008C	ATG19	P35193	415 aa		4.73	□□□□□ -1.65
YDR008C	YDR008C	YHL017W	P38745	532 aa		4.73	□□□□□ -1.65
YDR008C	YDR008C	HRQ1	Q05549	1077 aa		4.73	□□□□□ -1.65
YDR008C	YDR008C	ARO10	Q06408	635 aa		4.73	□□□□□ -1.65
YDR008C	YDR008C	MDM38	Q08179	573 aa		4.73	□□□□□ -1.65
YDR008C	YDR008C	WHI5	Q12416	295 aa		4.73	□□□□□ -1.65
YDR008C	YDR008C	GIC1	P38785	314 aa		4.72	□□□□□ -1.65
YDR008C	YDR008C	NPP2	P39997	493 aa		4.71	□□□□□ -1.66
YDR008C	YDR008C	SRT1	Q03175	343 aa		4.71	□□□□□ -1.66
YDR008C	YDR008C	YGR122W	P53272	402 aa		4.7	□□□□□ -1.66
YDR008C	YDR008C	MET6	P05694	767 aa	Known RBP	4.69	□□□□□ -1.66
YDR008C	YDR008C	RAD2	P07276	1031 aa		4.69	□□□□□ -1.66
YDR008C	YDR008C	PPX1	P38698	397 aa		4.68	□□□□□ -1.66
YDR008C	YDR008C	SED4	P25365	1065 aa		4.67	□□□□□ -1.66
YDR008C	YDR008C	HCA4	P20448	770 aa	Known RBP	4.66	□□□□□ -1.66
YDR008C	YDR008C	FUN30	P31380	1131 aa		4.66	□□□□□ -1.66
YDR008C	YDR008C	SFB2	P53953	876 aa		4.66	□□□□□ -1.66
YDR008C	YDR008C	YPL066W	Q12194	479 aa		4.66	□□□□□ -1.66
YDR008C	YDR008C	ILV6	P25605	309 aa	Known RBP	4.65	□□□□□ -1.67
YDR008C	YDR008C	ADY2	P25613	283 aa		4.65	□□□□□ -1.67
YDR008C	YDR008C	DAS1	P47005	663 aa		4.65	□□□□□ -1.67
YDR008C	YDR008C	YUR1	P26725	428 aa		4.64	□□□□□ -1.67
YDR008C	YDR008C	THI12	P42883	340 aa		4.64	□□□□□ -1.67
YDR008C	YDR008C	THI5	P43534	340 aa		4.64	□□□□□ -1.67
YDR008C	YDR008C	THI11	P47183	340 aa		4.64	□□□□□ -1.67
YDR008C	YDR008C	THI13	Q07748	340 aa		4.64	□□□□□ -1.67
YDR008C	YDR008C	YLL058W	Q12198	575 aa		4.64	□□□□□ -1.67
YDR008C	YDR008C	SSA1	P10591	642 aa	Known RBP	4.63	□□□□□ -1.67
YDR008C	YDR008C	CYC8	P14922	966 aa		4.63	□□□□□ -1.67
YDR008C	YDR008C	GAT1	P43574	510 aa		4.63	□□□□□ -1.67
YDR008C	YDR008C	ADY4	Q05955	493 aa		4.63	□□□□□ -1.67
YDR008C	YDR008C	SEC21	P32074	935 aa	Known RBP	4.62	□□□□□ -1.67
YDR008C	YDR008C	ELO3	P40319	345 aa		4.62	□□□□□ -1.67
YDR008C	YDR008C	PEX19	Q07418	342 aa		4.62	□□□□□ -1.67
YDR008C	YDR008C	PCL5	P38794	229 aa		4.61	□□□□□ -1.67
YDR008C	YDR008C	RPS26A	P39938	119 aa	Known RBP	4.61	□□□□□ -1.67
YDR008C	YDR008C	RPS26B	P39939	119 aa	Known RBP	4.61	□□□□□ -1.67
YDR008C	YDR008C	MOT2	P34909	587 aa	Known RBP	4.6	□□□□□ -1.67
YDR008C	YDR008C	YIL166C	P40445	542 aa		4.6	□□□□□ -1.67
YDR008C	YDR008C	KIN3	P22209	435 aa		4.59	□□□□□ -1.67
YDR008C	YDR008C	CTF13	P35203	478 aa		4.59	□□□□□ -1.67
YDR008C	YDR008C	MSC6	Q08818	692 aa	Known RBP	4.59	□□□□□ -1.67
YDR008C	YDR008C	MET3	P08536	511 aa		4.58	□□□□□ -1.68
YDR008C	YDR008C	CDC43	P18898	376 aa		4.58	□□□□□ -1.68
YDR008C	YDR008C	DLT1	Q04216	342 aa		4.58	□□□□□ -1.68
YDR008C	YDR008C	PUS2	P53167	370 aa		4.57	□□□□□ -1.68
YDR008C	YDR008C	RGT1	P32862	1170 aa		4.56	□□□□□ -1.68
YDR008C	YDR008C	SAH1	P39954	449 aa	Known RBP	4.55	□□□□□ -1.68
YDR008C	YDR008C	SSL1	Q04673	461 aa	Predicted RBP	4.55	□□□□□ -1.68
YDR008C	YDR008C	MRI1	Q06489	411 aa	Known RBP	4.55	□□□□□ -1.68
YDR008C	YDR008C	INO1	P11986	533 aa		4.54	□□□□□ -1.68
YDR008C	YDR008C	CAF20	P12962	161 aa	Known RBP	4.54	□□□□□ -1.68
YDR008C	YDR008C	RAD27	P26793	382 aa		4.54	□□□□□ -1.68
YDR008C	YDR008C	YGL176C	P46945	554 aa		4.54	□□□□□ -1.68
YDR008C	YDR008C	MUP1	P50276	574 aa		4.54	□□□□□ -1.68
YDR008C	YDR008C	MRPS35	P53292	345 aa		4.54	□□□□□ -1.68
YDR008C	YDR008C	FKH2	P41813	862 aa		4.53	□□□□□ -1.68
YDR008C	YDR008C	RAI1	P53063	387 aa	Known RBP	4.53	□□□□□ -1.68
YDR008C	YDR008C	TUB3	P09734	445 aa	Known RBP	4.52	□□□□□ -1.69
YDR008C	YDR008C	MCM2	P29469	868 aa		4.52	□□□□□ -1.69
YDR008C	YDR008C	BPL1	P48445	690 aa	Predicted RBP	4.52	□□□□□ -1.69
YDR008C	YDR008C	TRP2	P00899	507 aa	Known RBP	4.51	□□□□□ -1.69
YDR008C	YDR008C	RTT10	Q08924	1013 aa		4.51	□□□□□ -1.69
YDR008C	YDR008C	LYP1	P32487	611 aa		4.5	□□□□□ -1.69
YDR008C	YDR008C	YJL163C	P46996	555 aa		4.5	□□□□□ -1.69
YDR008C	YDR008C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	4.5	□□□□□ -1.69	not detected
YDR008C	YDR008C	TRM11	Q12463	433 aa		4.5	□□□□□ -1.69
YDR008C	YDR008C	EMP70	P32802	667 aa		4.49	□□□□□ -1.69
YDR008C	YDR008C	YBR053C	P38235	358 aa		4.49	□□□□□ -1.69
YDR008C	YDR008C	TDA9	Q04545	1251 aa		4.49	□□□□□ -1.69
YDR008C	YDR008C	STB2	P46679	850 aa		4.48	□□□□□ -1.69
YDR008C	YDR008C	YGR053C	P53234	283 aa		4.48	□□□□□ -1.69
YDR008C	YDR008C	RIM13	Q03792	727 aa		4.48	□□□□□ -1.69
YDR008C	YDR008C	CRR1	Q05790	422 aa		4.48	□□□□□ -1.69
YDR008C	YDR008C	RLF2	Q12495	606 aa		4.48	□□□□□ -1.69
YDR008C	YDR008C	RKM4	Q12504	494 aa		4.48	□□□□□ -1.69
YDR008C	YDR008C	ORC2	P32833	620 aa		4.47	□□□□□ -1.69
YDR008C	YDR008C	YKL107W	P34251	309 aa		4.47	□□□□□ -1.69
YDR008C	YDR008C	YPR196W	Q06595	470 aa		4.47	□□□□□ -1.69
YDR008C	YDR008C	FBP1	P09201	348 aa		4.46	□□□□□ -1.7
YDR008C	YDR008C	RPC82	P32349	654 aa		4.46	□□□□□ -1.7
YDR008C	YDR008C	SDP1	P40479	209 aa		4.46	□□□□□ -1.7
YDR008C	YDR008C	RIA1	P53893	1110 aa		4.46	□□□□□ -1.7
YDR008C	YDR008C	SPO11	P23179	398 aa		4.45	□□□□□ -1.7

Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms