RNA–Protein interactions for RNA: YCR009C

RVS161, Transcript of Amphiphysin-like lipid raft protein, yeast

Gene RVS161, Length 798 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RVS161	YCR009C	RPC82	P32349	654 aa		5.04	□□□□□ -1.6
RVS161	YCR009C	MOH1	P38191	138 aa		5.04	□□□□□ -1.6
RVS161	YCR009C	YGR053C	P53234	283 aa		5.04	□□□□□ -1.6
RVS161	YCR009C	TAF7	Q05021	590 aa		5.04	□□□□□ -1.6
RVS161	YCR009C	CCC2	P38995	1004 aa		5.03	□□□□□ -1.6
RVS161	YCR009C	KRI1	P42846	591 aa	Known RBP	5.03	□□□□□ -1.6
RVS161	YCR009C	YLR225C	Q05948	407 aa	Known RBP	5.03	□□□□□ -1.6
RVS161	YCR009C	NPC2	Q12408	173 aa		5.03	□□□□□ -1.6
RVS161	YCR009C	SRP101	P32916	621 aa		5.02	□□□□□ -1.61
RVS161	YCR009C	PIN4	P34217	668 aa	Known RBP RIP-Chip data	5.02	□□□□□ -1.61	not detected
RVS161	YCR009C	UBA2	P52488	636 aa		5.02	□□□□□ -1.61
RVS161	YCR009C	NCS6	P53088	359 aa		5.02	□□□□□ -1.61
RVS161	YCR009C	LAS17	Q12446	633 aa		5.02	□□□□□ -1.61
RVS161	YCR009C	KTR4	P38131	464 aa		5.01	□□□□□ -1.61
RVS161	YCR009C	NPP2	P39997	493 aa		5.01	□□□□□ -1.61
RVS161	YCR009C	YML122C	Q03207	126 aa		5.01	□□□□□ -1.61
RVS161	YCR009C	ESC2	Q06340	456 aa		5.01	□□□□□ -1.61
RVS161	YCR009C	EFT1	P32324	842 aa	Known RBP	5	□□□□□ -1.61
RVS161	YCR009C	CDC12	P32468	407 aa	Known RBP	5	□□□□□ -1.61
RVS161	YCR009C	BUL1	P48524	976 aa		5	□□□□□ -1.61
RVS161	YCR009C	FAA4	P47912	694 aa	Known RBP	4.99	□□□□□ -1.61
RVS161	YCR009C	SAH1	P39954	449 aa	Known RBP	4.98	□□□□□ -1.61
RVS161	YCR009C	SRP1	Q02821	542 aa	Known RBP	4.98	□□□□□ -1.61
RVS161	YCR009C	KAR4	P25583	335 aa		4.97	□□□□□ -1.61
RVS161	YCR009C	SBA1	P28707	216 aa	Known RBP	4.97	□□□□□ -1.61
RVS161	YCR009C	ABD1	P32783	436 aa	Predicted RBP	4.97	□□□□□ -1.61
RVS161	YCR009C	AGP1	P25376	633 aa		4.96	□□□□□ -1.62
RVS161	YCR009C	STU2	P46675	888 aa		4.96	□□□□□ -1.62
RVS161	YCR009C	GYP7	P48365	746 aa		4.96	□□□□□ -1.62
RVS161	YCR009C	SFB2	P53953	876 aa		4.96	□□□□□ -1.62
RVS161	YCR009C	WHI4	Q07655	649 aa	Known RBP	4.96	□□□□□ -1.62
RVS161	YCR009C	YOL073C	Q08232	322 aa		4.96	□□□□□ -1.62
RVS161	YCR009C	TRP4	P07285	380 aa	Predicted RBP	4.95	□□□□□ -1.62
RVS161	YCR009C	YKR078W	P36158	585 aa	Known RBP	4.95	□□□□□ -1.62
RVS161	YCR009C	GDE1	Q02979	1223 aa		4.95	□□□□□ -1.62
RVS161	YCR009C	UPC2	Q12151	913 aa		4.95	□□□□□ -1.62
RVS161	YCR009C	SUL1	P38359	859 aa		4.94	□□□□□ -1.62
RVS161	YCR009C	MBP1	P39678	833 aa		4.94	□□□□□ -1.62
RVS161	YCR009C	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RVS161	YCR009C	TIM44	Q01852	431 aa		4.94	□□□□□ -1.62
RVS161	YCR009C	OMS1	Q06668	471 aa		4.94	□□□□□ -1.62
RVS161	YCR009C	YLR040C	Q07988	224 aa		4.94	□□□□□ -1.62
RVS161	YCR009C	ACF2	Q12168	779 aa		4.94	□□□□□ -1.62
RVS161	YCR009C	ERG4	P25340	473 aa		4.93	□□□□□ -1.62
RVS161	YCR009C	STE14	P32584	239 aa		4.93	□□□□□ -1.62
RVS161	YCR009C	YBR238C	P38330	731 aa	Known RBP	4.93	□□□□□ -1.62
RVS161	YCR009C	YER158C	P40095	573 aa		4.93	□□□□□ -1.62
RVS161	YCR009C	QRI1	P43123	477 aa	Known RBP	4.93	□□□□□ -1.62
RVS161	YCR009C	CLN2	P20438	545 aa		4.92	□□□□□ -1.62
RVS161	YCR009C	TSL1	P38427	1098 aa	Known RBP	4.92	□□□□□ -1.62
RVS161	YCR009C	YKE2	P52553	114 aa		4.92	□□□□□ -1.62
RVS161	YCR009C	DUS3	Q06053	668 aa	Known RBP	4.92	□□□□□ -1.62
RVS161	YCR009C	MCH5	Q08777	521 aa		4.92	□□□□□ -1.62
RVS161	YCR009C	NAP1	P25293	417 aa	Known RBP	4.91	□□□□□ -1.62
RVS161	YCR009C	RAI1	P53063	387 aa	Known RBP	4.91	□□□□□ -1.62
RVS161	YCR009C	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	RIP-Chip
RVS161	YCR009C	RNT1	Q02555	471 aa		4.91	□□□□□ -1.62
RVS161	YCR009C	SHE9	Q04172	456 aa		4.91	□□□□□ -1.62
RVS161	YCR009C	FAL1	Q12099	399 aa	Known RBP	4.91	□□□□□ -1.62
RVS161	YCR009C	CAD1	P24813	409 aa	Known RBP	4.9	□□□□□ -1.63
RVS161	YCR009C	SED4	P25365	1065 aa		4.9	□□□□□ -1.63
RVS161	YCR009C	VPS16	Q03308	798 aa		4.9	□□□□□ -1.63
RVS161	YCR009C	TMN2	Q04562	672 aa		4.9	□□□□□ -1.63
RVS161	YCR009C	PIN2	Q12057	282 aa		4.9	□□□□□ -1.63
RVS161	YCR009C	CDC48	P25694	835 aa	Known RBP	4.89	□□□□□ -1.63
RVS161	YCR009C	SCT1	P32784	759 aa		4.89	□□□□□ -1.63
RVS161	YCR009C	VBA5	P36172	582 aa		4.89	□□□□□ -1.63
RVS161	YCR009C	SLU7	Q02775	382 aa	Known RBP	4.89	□□□□□ -1.63
RVS161	YCR009C	IRC10	Q08118	586 aa		4.89	□□□□□ -1.63
RVS161	YCR009C	AFR1	P33304	620 aa		4.88	□□□□□ -1.63
RVS161	YCR009C	YPR196W	Q06595	470 aa		4.88	□□□□□ -1.63
RVS161	YCR009C	PPR1	P07272	904 aa	Predicted RBP	4.87	□□□□□ -1.63
RVS161	YCR009C	FBP1	P09201	348 aa		4.87	□□□□□ -1.63
RVS161	YCR009C	NPP1	P25353	742 aa		4.87	□□□□□ -1.63
RVS161	YCR009C	STB4	P50104	949 aa		4.87	□□□□□ -1.63
RVS161	YCR009C	ERG5	P54781	538 aa		4.87	□□□□□ -1.63
RVS161	YCR009C	OPI10	Q08202	246 aa		4.87	□□□□□ -1.63
RVS161	YCR009C	NOT3	P06102	836 aa	Known RBP	4.86	□□□□□ -1.63
RVS161	YCR009C	STE13	P33894	931 aa		4.86	□□□□□ -1.63
RVS161	YCR009C	YKL069W	P36088	180 aa		4.86	□□□□□ -1.63
RVS161	YCR009C	SIT1	P39980	628 aa		4.86	□□□□□ -1.63
RVS161	YCR009C	ATF1	P40353	525 aa		4.86	□□□□□ -1.63
RVS161	YCR009C	SVF1	Q05515	481 aa		4.86	□□□□□ -1.63
RVS161	YCR009C	ALG7	P07286	448 aa		4.85	□□□□□ -1.63
RVS161	YCR009C	VPS30	Q02948	557 aa		4.85	□□□□□ -1.63
RVS161	YCR009C	YDR306C	Q06640	478 aa		4.85	□□□□□ -1.63
RVS161	YCR009C	BDF2	Q07442	638 aa		4.85	□□□□□ -1.63
RVS161	YCR009C	PPH3	P32345	308 aa		4.84	□□□□□ -1.63
RVS161	YCR009C	MAD1	P40957	749 aa		4.84	□□□□□ -1.63
RVS161	YCR009C	TRM13	Q12383	476 aa		4.84	□□□□□ -1.63
RVS161	YCR009C	ADE8	P04161	214 aa		4.83	□□□□□ -1.64
RVS161	YCR009C	SEC21	P32074	935 aa	Known RBP	4.83	□□□□□ -1.64
RVS161	YCR009C	MRP8	P35719	219 aa		4.83	□□□□□ -1.64
RVS161	YCR009C	SDP1	P40479	209 aa		4.83	□□□□□ -1.64
RVS161	YCR009C	CWC24	P53769	259 aa		4.83	□□□□□ -1.64
RVS161	YCR009C	BUL2	Q03758	920 aa	Known RBP	4.83	□□□□□ -1.64
RVS161	YCR009C	SSL1	Q04673	461 aa	Predicted RBP	4.83	□□□□□ -1.64
RVS161	YCR009C	CUE2	P36075	443 aa	Known RBP	4.82	□□□□□ -1.64
RVS161	YCR009C	PBY1	P38254	753 aa		4.82	□□□□□ -1.64
RVS161	YCR009C	DAS1	P47005	663 aa		4.82	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms