RNA–Protein interactions for RNA: YAL022C

FUN26, Transcript of High affinity, broad selectivity, nucleoside/nucleobase transporter, yeast

Gene FUN26, Length 1,554 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
FUN26	YAL022C	SMC5	Q08204	1093 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	HMI1	Q12039	706 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	ATG9	Q12142	997 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	PHO8	P11491	566 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	APL1	P27351	700 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	RGT1	P32862	1170 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	EFM2	P38347	419 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	YEL025C	P39991	1188 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	RRP6	Q12149	733 aa	Known RBP	13.88	□□□□□ -0.19
FUN26	YAL022C	NCR1	Q12200	1170 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	TRM11	Q12463	433 aa		13.88	□□□□□ -0.19
FUN26	YAL022C	SSB1	P11484	613 aa	Known RBP	13.87	□□□□□ -0.19
FUN26	YAL022C	YSC83	P32792	385 aa		13.87	□□□□□ -0.19
FUN26	YAL022C	VFA1	P40080	203 aa		13.87	□□□□□ -0.19
FUN26	YAL022C	SSB2	P40150	613 aa	Known RBP	13.87	□□□□□ -0.19
FUN26	YAL022C	TIF6	Q12522	245 aa	Known RBP	13.87	□□□□□ -0.19
FUN26	YAL022C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	13.86	□□□□□ -0.19	not detected
FUN26	YAL022C	YUR1	P26725	428 aa		13.86	□□□□□ -0.19
FUN26	YAL022C	MXR1	P40029	184 aa		13.86	□□□□□ -0.19
FUN26	YAL022C	OSW7	P43611	510 aa		13.86	□□□□□ -0.19
FUN26	YAL022C	ROD1	Q02805	837 aa		13.86	□□□□□ -0.19
FUN26	YAL022C	YLR225C	Q05948	407 aa	Known RBP	13.86	□□□□□ -0.19
FUN26	YAL022C	PLP2	Q12017	286 aa		13.86	□□□□□ -0.19
FUN26	YAL022C	YDR461C-A	Q2V2P7	80 aa		13.86	□□□□□ -0.19
FUN26	YAL022C	PCH2	P38126	564 aa		13.85	□□□□□ -0.19
FUN26	YAL022C	MDR1	P53258	950 aa		13.85	□□□□□ -0.19
FUN26	YAL022C	CAF130	P53280	1122 aa	Predicted RBP	13.85	□□□□□ -0.19
FUN26	YAL022C	GIR2	Q03768	265 aa	Predicted RBP	13.85	□□□□□ -0.19
FUN26	YAL022C	GPI13	Q07830	1017 aa		13.85	□□□□□ -0.19
FUN26	YAL022C	NOC3	Q07896	663 aa	Predicted RBP	13.85	□□□□□ -0.19
FUN26	YAL022C	YLL058W	Q12198	575 aa		13.85	□□□□□ -0.19
FUN26	YAL022C	VPS35	P34110	944 aa		13.84	□□□□□ -0.19
FUN26	YAL022C	ERC1	P38767	581 aa		13.84	□□□□□ -0.19
FUN26	YAL022C	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	13.84	□□□□□ -0.19	not detected
FUN26	YAL022C	RPS7B	P48164	190 aa	Known RBP	13.84	□□□□□ -0.19
FUN26	YAL022C	UME1	Q03010	460 aa		13.84	□□□□□ -0.19
FUN26	YAL022C	VPS38	Q05919	439 aa		13.84	□□□□□ -0.19
FUN26	YAL022C	FAL1	Q12099	399 aa	Known RBP	13.84	□□□□□ -0.19
FUN26	YAL022C	DED1	P06634	604 aa	Known RBP	13.83	□□□□□ -0.19
FUN26	YAL022C	RRP43	P25359	394 aa	Predicted RBP	13.83	□□□□□ -0.19
FUN26	YAL022C	COT1	P32798	439 aa		13.83	□□□□□ -0.19
FUN26	YAL022C	MNN4	P36044	1178 aa		13.83	□□□□□ -0.19
FUN26	YAL022C	ALF1	P53904	254 aa		13.83	□□□□□ -0.19
FUN26	YAL022C	MET7	Q08645	548 aa		13.83	□□□□□ -0.19
FUN26	YAL022C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	13.83	□□□□□ -0.2	not detected
FUN26	YAL022C	AVT1	P47082	602 aa		13.83	□□□□□ -0.2
FUN26	YAL022C	ERG5	P54781	538 aa		13.83	□□□□□ -0.2
FUN26	YAL022C	COQ9	Q05779	260 aa		13.83	□□□□□ -0.2
FUN26	YAL022C	SPO12	P17123	173 aa		13.82	□□□□□ -0.2
FUN26	YAL022C	NAM7	P30771	971 aa	Known RBP	13.82	□□□□□ -0.2
FUN26	YAL022C	LCB2	P40970	561 aa		13.82	□□□□□ -0.2
FUN26	YAL022C	TAM41	P53230	385 aa		13.82	□□□□□ -0.2
FUN26	YAL022C	RLP24	Q07915	199 aa	Known RBP	13.82	□□□□□ -0.2
FUN26	YAL022C	NEW1	Q08972	1196 aa	Known RBP	13.82	□□□□□ -0.2
FUN26	YAL022C	SWI6	P09959	803 aa		13.81	□□□□□ -0.2
FUN26	YAL022C	TIM23	P32897	222 aa		13.81	□□□□□ -0.2
FUN26	YAL022C	KTR2	P33550	425 aa		13.81	□□□□□ -0.2
FUN26	YAL022C	ATG3	P40344	310 aa		13.81	□□□□□ -0.2
FUN26	YAL022C	YAP5	P40574	245 aa		13.81	□□□□□ -0.2
FUN26	YAL022C	COS5	P47187	383 aa		13.81	□□□□□ -0.2
FUN26	YAL022C	SCS3	P53012	380 aa		13.81	□□□□□ -0.2
FUN26	YAL022C	MLH2	Q07980	695 aa		13.81	□□□□□ -0.2
FUN26	YAL022C	PPR1	P07272	904 aa	Predicted RBP	13.8	□□□□□ -0.2
FUN26	YAL022C	RME1	P32338	300 aa	Known RBP	13.8	□□□□□ -0.2
FUN26	YAL022C	IRE1	P32361	1115 aa		13.8	□□□□□ -0.2
FUN26	YAL022C	EAF5	P39995	279 aa		13.8	□□□□□ -0.2
FUN26	YAL022C	SHQ1	P40486	507 aa	Predicted RBP	13.8	□□□□□ -0.2
FUN26	YAL022C	FIG4	P42837	879 aa		13.8	□□□□□ -0.2
FUN26	YAL022C	RTT102	P53330	157 aa		13.8	□□□□□ -0.2
FUN26	YAL022C	CHS2	P14180	963 aa		13.79	□□□□□ -0.2
FUN26	YAL022C	PSP2	P50109	593 aa	Known RBP	13.79	□□□□□ -0.2
FUN26	YAL022C	TIM8	P57744	87 aa		13.79	□□□□□ -0.2
FUN26	YAL022C	POX1	P13711	748 aa		13.79	□□□□□ -0.2
FUN26	YAL022C	SSD1	P24276	1250 aa	Known RBP RIP-Chip data	13.79	□□□□□ -0.2	not detected
FUN26	YAL022C	EFT1	P32324	842 aa	Known RBP	13.79	□□□□□ -0.2
FUN26	YAL022C	XRS2	P33301	854 aa		13.79	□□□□□ -0.2
FUN26	YAL022C	SMC2	P38989	1170 aa	Known RBP	13.79	□□□□□ -0.2
FUN26	YAL022C	UTP5	Q04177	643 aa	Known RBP	13.79	□□□□□ -0.2
FUN26	YAL022C	DON1	Q05610	365 aa		13.79	□□□□□ -0.2
FUN26	YAL022C	YPR078C	Q06813	372 aa		13.79	□□□□□ -0.2
FUN26	YAL022C	IES4	Q08561	116 aa		13.79	□□□□□ -0.2
FUN26	YAL022C	YOL098C	Q12496	1037 aa		13.79	□□□□□ -0.2
FUN26	YAL022C	MTF2	P10849	440 aa		13.78	□□□□□ -0.2
FUN26	YAL022C	PDC6	P26263	563 aa	Known RBP	13.78	□□□□□ -0.2
FUN26	YAL022C	NIP100	P33420	868 aa		13.78	□□□□□ -0.2
FUN26	YAL022C	IES1	P43579	692 aa		13.78	□□□□□ -0.2
FUN26	YAL022C	SMC3	P47037	1230 aa		13.78	□□□□□ -0.2
FUN26	YAL022C	YLR297W	Q05899	129 aa		13.78	□□□□□ -0.2
FUN26	YAL022C	CDC53	Q12018	815 aa	Known RBP	13.78	□□□□□ -0.2
FUN26	YAL022C	OSW2	Q12202	724 aa		13.78	□□□□□ -0.2
FUN26	YAL022C	SEC23	P15303	768 aa	Known RBP	13.77	□□□□□ -0.21
FUN26	YAL022C	TUP1	P16649	713 aa		13.77	□□□□□ -0.21
FUN26	YAL022C	KIN82	P25341	720 aa		13.77	□□□□□ -0.21
FUN26	YAL022C	VTC3	Q02725	835 aa		13.77	□□□□□ -0.21
FUN26	YAL022C	MUD1	P32605	298 aa	Known RBP	13.76	□□□□□ -0.21
FUN26	YAL022C	SMC1	P32908	1225 aa		13.76	□□□□□ -0.21
FUN26	YAL022C	YKL023W	P36103	277 aa	Known RBP	13.76	□□□□□ -0.21
FUN26	YAL022C	FLR1	P38124	548 aa		13.76	□□□□□ -0.21
FUN26	YAL022C	CCC2	P38995	1004 aa		13.76	□□□□□ -0.21
FUN26	YAL022C	CAJ1	P39101	391 aa		13.76	□□□□□ -0.21

Retrieved 100 of 5,963 RNA–protein pairs in 75.6 ms