RNA–Protein interactions for RNA: YOR076C

SKI7, Transcript of Coupling protein for the Ski complex and cytoplasmic exosome, yeast

Gene SKI7, Length 2,244 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKI7	YOR076C	SDS24	P38314	527 aa		0.62	□□□□□ -2.31
SKI7	YOR076C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	0.62	□□□□□ -2.31	not detected
SKI7	YOR076C	ERG5	P54781	538 aa		0.62	□□□□□ -2.31
SKI7	YOR076C	ATG13	Q06628	738 aa		0.62	□□□□□ -2.31
SKI7	YOR076C	GUP2	Q08929	609 aa		0.62	□□□□□ -2.31
SKI7	YOR076C	GEF1	P37020	779 aa		0.61	□□□□□ -2.31
SKI7	YOR076C	RKM2	Q03942	479 aa		0.61	□□□□□ -2.31
SKI7	YOR076C	NEW1	Q08972	1196 aa	Known RBP	0.61	□□□□□ -2.31
SKI7	YOR076C	YLR149C	Q99296	730 aa		0.61	□□□□□ -2.31
SKI7	YOR076C	HOM2	P13663	365 aa	Known RBP	0.61	□□□□□ -2.31
SKI7	YOR076C	CWC15	Q03772	175 aa	Known RBP	0.61	□□□□□ -2.31
SKI7	YOR076C	SHU2	P38957	223 aa		0.6	□□□□□ -2.31
SKI7	YOR076C	OSW1	Q08692	278 aa		0.6	□□□□□ -2.31
SKI7	YOR076C	DAK2	P43550	591 aa		0.6	□□□□□ -2.31
SKI7	YOR076C	VMA4	P22203	233 aa	Known RBP	0.59	□□□□□ -2.31
SKI7	YOR076C	MSH3	P25336	1018 aa		0.59	□□□□□ -2.31
SKI7	YOR076C	EMP70	P32802	667 aa		0.59	□□□□□ -2.31
SKI7	YOR076C	RVS167	P39743	482 aa	Known RBP	0.59	□□□□□ -2.31
SKI7	YOR076C	ZRG8	P40021	1076 aa		0.59	□□□□□ -2.31
SKI7	YOR076C	URM1	P40554	99 aa	Predicted RBP	0.59	□□□□□ -2.31
SKI7	YOR076C	IRC8	P47046	822 aa		0.59	□□□□□ -2.31
SKI7	YOR076C	MON1	P53129	644 aa		0.59	□□□□□ -2.31
SKI7	YOR076C	SCP160	P06105	1222 aa	Known RBP RIP-Chip data	0.58	□□□□□ -2.32	not detected
SKI7	YOR076C	ACE2	P21192	770 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	KIN3	P22209	435 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	YOX1	P34161	385 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	RDH54	P38086	958 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	YAP1801	P38856	637 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	XBP1	P40489	647 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	RPL34B	P40525	121 aa	Known RBP	0.58	□□□□□ -2.32
SKI7	YOR076C	DAS1	P47005	663 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	APM1	Q00776	475 aa	Predicted RBP	0.58	□□□□□ -2.32
SKI7	YOR076C	SLU7	Q02775	382 aa	Known RBP	0.58	□□□□□ -2.32
SKI7	YOR076C	SCW10	Q04951	389 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	CDC43	P18898	376 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	CAD1	P24813	409 aa	Known RBP	0.58	□□□□□ -2.32
SKI7	YOR076C	FRE5	Q08908	694 aa		0.58	□□□□□ -2.32
SKI7	YOR076C	RPP2A	P05319	106 aa	Known RBP	0.57	□□□□□ -2.32
SKI7	YOR076C	ADD66	P36040	267 aa		0.57	□□□□□ -2.32
SKI7	YOR076C	PNP1	Q05788	311 aa		0.57	□□□□□ -2.32
SKI7	YOR076C	HFM1	P51979	1187 aa		0.57	□□□□□ -2.32
SKI7	YOR076C	XYL2	Q07993	356 aa		0.57	□□□□□ -2.32
SKI7	YOR076C	SPE1	P08432	466 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	HEM13	P11353	328 aa	Known RBP	0.56	□□□□□ -2.32
SKI7	YOR076C	VPS34	P22543	875 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	SPO11	P23179	398 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	ATG14	P38270	344 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	PTC5	Q12511	572 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	ENA1	P13587	1091 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	ENA2	Q01896	1091 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	ADY4	Q05955	493 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	YPL260W	Q08977	551 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	ENA5	Q12691	1091 aa		0.56	□□□□□ -2.32
SKI7	YOR076C	PGK1	P00560	416 aa	Known RBP	0.55	□□□□□ -2.32
SKI7	YOR076C	ALG3	P38179	458 aa		0.55	□□□□□ -2.32
SKI7	YOR076C	PCL5	P38794	229 aa		0.55	□□□□□ -2.32
SKI7	YOR076C	BSC2	Q05611	235 aa		0.55	□□□□□ -2.32
SKI7	YOR076C	CDA1	Q06702	301 aa		0.55	□□□□□ -2.32
SKI7	YOR076C	WHI4	Q07655	649 aa	Known RBP	0.55	□□□□□ -2.32
SKI7	YOR076C	NDD1	Q08887	554 aa		0.55	□□□□□ -2.32
SKI7	YOR076C	YEL020C	P39994	560 aa		0.54	□□□□□ -2.32
SKI7	YOR076C	PEX13	P80667	386 aa		0.54	□□□□□ -2.32
SKI7	YOR076C	MNL2	Q12205	849 aa		0.54	□□□□□ -2.32
SKI7	YOR076C	BOL3	P39724	118 aa		0.53	□□□□□ -2.32
SKI7	YOR076C	YGL176C	P46945	554 aa		0.53	□□□□□ -2.32
SKI7	YOR076C	YTH1	Q06102	208 aa	Predicted RBP	0.53	□□□□□ -2.32
SKI7	YOR076C	INP54	Q08227	384 aa	Known RBP	0.53	□□□□□ -2.32
SKI7	YOR076C	PUP1	P25043	261 aa		0.53	□□□□□ -2.33
SKI7	YOR076C	GCS1	P35197	352 aa		0.53	□□□□□ -2.33
SKI7	YOR076C	TTI1	P36097	1038 aa		0.53	□□□□□ -2.33
SKI7	YOR076C	ENP2	P48234	707 aa	Known RBP	0.53	□□□□□ -2.33
SKI7	YOR076C	YGR012W	P53206	393 aa		0.53	□□□□□ -2.33
SKI7	YOR076C	UFD2	P54860	961 aa		0.53	□□□□□ -2.33
SKI7	YOR076C	TAF3	Q12297	353 aa		0.53	□□□□□ -2.33
SKI7	YOR076C	ERG11	P10614	530 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	STE14	P32584	239 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	CCT7	P42943	550 aa	Known RBP	0.52	□□□□□ -2.33
SKI7	YOR076C	YNL011C	P53980	444 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	BI4	P03879	638 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	YER152C	P10356	443 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	DMC1	P25453	334 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	PAC2	P39937	518 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	RRT14	P40470	206 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	STP1	Q00947	519 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	UPC2	Q12151	913 aa		0.52	□□□□□ -2.33
SKI7	YOR076C	ELO3	P40319	345 aa		0.51	□□□□□ -2.33
SKI7	YOR076C	BAS1	P22035	811 aa		0.5	□□□□□ -2.33
SKI7	YOR076C	UGA2	P38067	497 aa		0.5	□□□□□ -2.33
SKI7	YOR076C	EST2	Q06163	884 aa		0.5	□□□□□ -2.33
SKI7	YOR076C	NUP1	P20676	1076 aa		0.5	□□□□□ -2.33
SKI7	YOR076C	ECM32	P32644	1121 aa	Known RBP	0.5	□□□□□ -2.33
SKI7	YOR076C	PXL1	P36166	706 aa		0.5	□□□□□ -2.33
SKI7	YOR076C	NAB6	Q03735	1134 aa	Known RBP RIP-Chip data	0.5	□□□□□ -2.33	not detected
SKI7	YOR076C	YOR111W	Q99210	232 aa		0.5	□□□□□ -2.33
SKI7	YOR076C	RPN13	O13563	156 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	LSB5	P25369	354 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	UGA4	P32837	571 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	PEX28	P38848	579 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	MTC3	P53077	123 aa		0.49	□□□□□ -2.33
SKI7	YOR076C	YGL140C	P53120	1219 aa		0.49	□□□□□ -2.33

Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms