RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W RXT2P38255 430 aa8.23□□□□□ -1.09
SNF7YLR025W SPL2P38839 148 aa8.23□□□□□ -1.09
SNF7YLR025W VID27P40157 782 aa8.23□□□□□ -1.09
SNF7YLR025W CTH1P47976 325 aa8.23□□□□□ -1.09
SNF7YLR025W CIT1P00890 479 aa8.22□□□□□ -1.09
SNF7YLR025W CDC6P09119 513 aa8.22□□□□□ -1.09
SNF7YLR025W LCB1P25045 558 aaKnown RBP8.22□□□□□ -1.09
SNF7YLR025W BMH1P29311 267 aaKnown RBP8.22□□□□□ -1.09
SNF7YLR025W MCM4P30665 933 aaKnown RBP8.22□□□□□ -1.09
SNF7YLR025W ADE17P38009 592 aaKnown RBP8.22□□□□□ -1.09
SNF7YLR025W PFF1P38244 976 aa8.22□□□□□ -1.09
SNF7YLR025W SPT8P38915 602 aa8.22□□□□□ -1.09
SNF7YLR025W FYV8P46949 817 aaKnown RBP8.22□□□□□ -1.09
SNF7YLR025W VPS75P53853 264 aa8.22□□□□□ -1.09
SNF7YLR025W YOR296WQ08748 1289 aa8.22□□□□□ -1.09
SNF7YLR025W YOR111WQ99210 232 aa8.22□□□□□ -1.09
SNF7YLR025W RAD61Q99359 647 aa8.22□□□□□ -1.09
SNF7YLR025W QCR6P00127 147 aa8.21□□□□□ -1.1
SNF7YLR025W MET6P05694 767 aaKnown RBP8.21□□□□□ -1.1
SNF7YLR025W CDC37P06101 506 aaKnown RBP8.21□□□□□ -1.1
SNF7YLR025W CYT1P07143 309 aa8.21□□□□□ -1.1
SNF7YLR025W CDC3P32457 520 aaKnown RBP8.21□□□□□ -1.1
SNF7YLR025W SAS3P34218 831 aa8.21□□□□□ -1.1
SNF7YLR025W UGA2P38067 497 aa8.21□□□□□ -1.1
SNF7YLR025W TOS1P38288 455 aa8.21□□□□□ -1.1
SNF7YLR025W CAJ1P39101 391 aa8.21□□□□□ -1.1
SNF7YLR025W PCI8P40512 444 aa8.21□□□□□ -1.1
SNF7YLR025W CEP3P40969 608 aa8.21□□□□□ -1.1
SNF7YLR025W GSM1P42950 618 aa8.21□□□□□ -1.1
SNF7YLR025W CUE3P53137 624 aaKnown RBP8.21□□□□□ -1.1
SNF7YLR025W CWC15Q03772 175 aaKnown RBP8.21□□□□□ -1.1
SNF7YLR025W GIS4Q04233 774 aa8.21□□□□□ -1.1
SNF7YLR025W PSR2Q07949 397 aa8.21□□□□□ -1.1
SNF7YLR025W VPS1P21576 704 aaKnown RBP8.2□□□□□ -1.1
SNF7YLR025W URA1P28272 314 aaPredicted RBP8.2□□□□□ -1.1
SNF7YLR025W RPL8BP29453 256 aaKnown RBP8.2□□□□□ -1.1
SNF7YLR025W MYO3P36006 1272 aa8.2□□□□□ -1.1
SNF7YLR025W CSM2P40465 213 aa8.2□□□□□ -1.1
SNF7YLR025W BRE2P43132 505 aa8.2□□□□□ -1.1
SNF7YLR025W NUP85P46673 744 aa8.2□□□□□ -1.1
SNF7YLR025W SUM1P46676 1062 aa8.2□□□□□ -1.1
SNF7YLR025W HDA1P53973 706 aa8.2□□□□□ -1.1
SNF7YLR025W RPT6Q01939 405 aaKnown RBP8.2□□□□□ -1.1
SNF7YLR025W MMR1Q06324 491 aa8.2□□□□□ -1.1
SNF7YLR025W TLG2Q08144 397 aa8.2□□□□□ -1.1
SNF7YLR025W AFT2Q08957 416 aa8.2□□□□□ -1.1
SNF7YLR025W CLF1Q12309 687 aaPredicted RBP8.2□□□□□ -1.1
SNF7YLR025W PET123P17558 318 aa8.19□□□□□ -1.1
SNF7YLR025W ERO1Q03103 563 aa8.19□□□□□ -1.1
SNF7YLR025W SMD2Q06217 110 aaKnown RBP8.19□□□□□ -1.1
SNF7YLR025W KEL3Q08979 651 aaPredicted RBP8.19□□□□□ -1.1
SNF7YLR025W WRS1Q12109 432 aaKnown RBP8.19□□□□□ -1.1
SNF7YLR025W GRX6Q12438 231 aa8.19□□□□□ -1.1
SNF7YLR025W FAS2P19097 1887 aaKnown RBP8.18□□□□□ -1.1
SNF7YLR025W HIS4P00815 799 aaKnown RBP8.18□□□□□ -1.1
SNF7YLR025W MCM3P24279 971 aaKnown RBP8.18□□□□□ -1.1
SNF7YLR025W YHL050CP38721 697 aa8.18□□□□□ -1.1
SNF7YLR025W UTP7P40055 554 aaKnown RBP8.18□□□□□ -1.1
SNF7YLR025W APT1P49435 187 aaKnown RBP8.18□□□□□ -1.1
SNF7YLR025W SDA1P53313 767 aaKnown RBP8.18□□□□□ -1.1
SNF7YLR025W CSM3Q04659 317 aa8.18□□□□□ -1.1
SNF7YLR025W TOS4Q06266 489 aa8.18□□□□□ -1.1
SNF7YLR025W TUF1P02992 437 aaKnown RBP8.17□□□□□ -1.1
SNF7YLR025W THR4P16120 514 aaKnown RBP8.17□□□□□ -1.1
SNF7YLR025W RRP43P25359 394 aaPredicted RBP8.17□□□□□ -1.1
SNF7YLR025W LTV1P34078 463 aa8.17□□□□□ -1.1
SNF7YLR025W TOM71P38825 639 aaKnown RBP8.17□□□□□ -1.1
SNF7YLR025W MSN5P52918 1224 aa8.17□□□□□ -1.1
SNF7YLR025W SEN54Q02825 467 aaPredicted RBP8.17□□□□□ -1.1
SNF7YLR025W PRP42Q03776 544 aaKnown RBP8.17□□□□□ -1.1
SNF7YLR025W PUN1Q06991 263 aa8.17□□□□□ -1.1
SNF7YLR025W TMA16Q08687 178 aa8.17□□□□□ -1.1
SNF7YLR025W MCM1P11746 286 aa8.16□□□□□ -1.1
SNF7YLR025W STI1P15705 589 aaKnown RBP RIP-Chip data8.16□□□□□ -1.1not detected
SNF7YLR025W ALG1P16661 449 aa8.16□□□□□ -1.1
SNF7YLR025W SEC20P28791 383 aa8.16□□□□□ -1.1
SNF7YLR025W SMY1P32364 656 aaKnown RBP8.16□□□□□ -1.1
SNF7YLR025W PSY4P38193 441 aa8.16□□□□□ -1.1
SNF7YLR025W LSC2P53312 427 aa8.16□□□□□ -1.1
SNF7YLR025W TRS120Q04183 1289 aa8.16□□□□□ -1.1
SNF7YLR025W MYO5Q04439 1219 aaKnown RBP8.16□□□□□ -1.1
SNF7YLR025W VPS38Q05919 439 aa8.16□□□□□ -1.1
SNF7YLR025W YPQ2Q06328 317 aa8.16□□□□□ -1.1
SNF7YLR025W YOL098CQ12496 1037 aa8.16□□□□□ -1.1
SNF7YLR025W SNF3P10870 884 aa8.15□□□□□ -1.1
SNF7YLR025W ACE2P21192 770 aa8.15□□□□□ -1.1
SNF7YLR025W RET1P22276 1149 aaKnown RBP8.15□□□□□ -1.1
SNF7YLR025W MRC1P25588 1096 aa8.15□□□□□ -1.1
SNF7YLR025W PWP2P25635 923 aaKnown RBP8.15□□□□□ -1.1
SNF7YLR025W SEC65P29478 273 aa8.15□□□□□ -1.1
SNF7YLR025W CTM1P38818 585 aa8.15□□□□□ -1.1
SNF7YLR025W PES4P39684 611 aa8.15□□□□□ -1.1
SNF7YLR025W NDC80P40460 691 aa8.15□□□□□ -1.1
SNF7YLR025W PRP31P49704 494 aaPredicted RBP8.15□□□□□ -1.1
SNF7YLR025W BNI5P53890 448 aaKnown RBP8.15□□□□□ -1.1
SNF7YLR025W YLR287CQ05881 355 aa8.15□□□□□ -1.1
SNF7YLR025W ACK1Q07622 623 aaPredicted RBP8.15□□□□□ -1.1
SNF7YLR025W APL4Q12028 832 aa8.15□□□□□ -1.1
SNF7YLR025W ATG9Q12142 997 aa8.15□□□□□ -1.1
SNF7YLR025W PTC5Q12511 572 aa8.15□□□□□ -1.1
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms