RNA–Protein interactions for RNA: YGR136W

LSB1, Transcript of Negative regulator of actin nucleation-promoting factor activity, yeast

Gene LSB1, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LSB1	YGR136W	IDI1	P15496	288 aa		4.98	□□□□□ -1.61
LSB1	YGR136W	PEP7	P32609	515 aa		4.98	□□□□□ -1.61
LSB1	YGR136W	PET112	P33893	541 aa		4.98	□□□□□ -1.61
LSB1	YGR136W	YKL222C	P35995	705 aa		4.98	□□□□□ -1.61
LSB1	YGR136W	RPS26A	P39938	119 aa	Known RBP	4.98	□□□□□ -1.61
LSB1	YGR136W	RPS26B	P39939	119 aa	Known RBP	4.98	□□□□□ -1.61
LSB1	YGR136W	MRPS18	P42847	217 aa		4.98	□□□□□ -1.61
LSB1	YGR136W	OSW7	P43611	510 aa		4.98	□□□□□ -1.61
LSB1	YGR136W	ZDS2	P54786	942 aa		4.98	□□□□□ -1.61
LSB1	YGR136W	VPS64	Q03944	604 aa		4.98	□□□□□ -1.61
LSB1	YGR136W	SPR28	Q04921	423 aa		4.98	□□□□□ -1.61
LSB1	YGR136W	TIF6	Q12522	245 aa	Known RBP	4.98	□□□□□ -1.61
LSB1	YGR136W	FLP1	P03870	423 aa		4.97	□□□□□ -1.61
LSB1	YGR136W	APL2	P36000	726 aa	Predicted RBP	4.97	□□□□□ -1.61
LSB1	YGR136W	UBP5	P39944	805 aa		4.97	□□□□□ -1.61
LSB1	YGR136W	YER156C	P40093	338 aa	Known RBP	4.97	□□□□□ -1.61
LSB1	YGR136W	RAT1	Q02792	1006 aa	Known RBP	4.97	□□□□□ -1.61
LSB1	YGR136W	SRT1	Q03175	343 aa		4.97	□□□□□ -1.61
LSB1	YGR136W	QCR6	P00127	147 aa		4.96	□□□□□ -1.62
LSB1	YGR136W	YHL008C	P38750	627 aa		4.96	□□□□□ -1.62
LSB1	YGR136W	ALD6	P54115	500 aa	Known RBP	4.96	□□□□□ -1.62
LSB1	YGR136W	MSH6	Q03834	1242 aa		4.96	□□□□□ -1.62
LSB1	YGR136W	IRC3	Q06683	689 aa		4.96	□□□□□ -1.62
LSB1	YGR136W	YOL057W	Q08225	711 aa		4.96	□□□□□ -1.62
LSB1	YGR136W	WRS1	Q12109	432 aa	Known RBP	4.96	□□□□□ -1.62
LSB1	YGR136W	TAF13	P11747	167 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	PRE9	P23638	258 aa	Known RBP	4.95	□□□□□ -1.62
LSB1	YGR136W	ERT1	P38140	529 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	BRN1	P38170	754 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	ECM2	P38241	364 aa	Known RBP	4.95	□□□□□ -1.62
LSB1	YGR136W	PFF1	P38244	976 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	OPY1	P38271	328 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	AIM46	P38885	310 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	VAC8	P39968	578 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	GIP2	P40036	548 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	TED1	P40533	473 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	SPO74	P45819	413 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	EAF7	P53911	425 aa	Known RBP	4.95	□□□□□ -1.62
LSB1	YGR136W	YAF9	P53930	226 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	PKH1	Q03407	766 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	ECM16	Q04217	1267 aa	Known RBP	4.95	□□□□□ -1.62
LSB1	YGR136W	DIB1	Q06819	143 aa	Predicted RBP	4.95	□□□□□ -1.62
LSB1	YGR136W	BDF2	Q07442	638 aa		4.95	□□□□□ -1.62
LSB1	YGR136W	PUF3	Q07807	879 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
LSB1	YGR136W	CYC7	P00045	113 aa		4.94	□□□□□ -1.62
LSB1	YGR136W	CAF20	P12962	161 aa	Known RBP	4.94	□□□□□ -1.62
LSB1	YGR136W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
LSB1	YGR136W	NAM7	P30771	971 aa	Known RBP	4.94	□□□□□ -1.62
LSB1	YGR136W	SMY1	P32364	656 aa	Known RBP	4.94	□□□□□ -1.62
LSB1	YGR136W	RVS167	P39743	482 aa	Known RBP	4.94	□□□□□ -1.62
LSB1	YGR136W	KRI1	P42846	591 aa	Known RBP	4.94	□□□□□ -1.62
LSB1	YGR136W	RPS0B	P46654	252 aa	Known RBP	4.94	□□□□□ -1.62
LSB1	YGR136W	ITC1	P53125	1264 aa		4.94	□□□□□ -1.62
LSB1	YGR136W	DSE4	P53753	1117 aa		4.94	□□□□□ -1.62
LSB1	YGR136W	SQS1	P53866	767 aa	Known RBP	4.94	□□□□□ -1.62
LSB1	YGR136W	DNM1	P54861	757 aa		4.94	□□□□□ -1.62
LSB1	YGR136W	KIN4	Q01919	800 aa		4.94	□□□□□ -1.62
LSB1	YGR136W	YPL109C	Q02981	657 aa		4.94	□□□□□ -1.62
LSB1	YGR136W	DAL4	Q04895	635 aa		4.94	□□□□□ -1.62
LSB1	YGR136W	SSF2	Q12153	453 aa	Predicted RBP	4.94	□□□□□ -1.62
LSB1	YGR136W	RPS19A	P07280	144 aa	Known RBP	4.93	□□□□□ -1.62
LSB1	YGR136W	RPS19B	P07281	144 aa	Predicted RBP	4.93	□□□□□ -1.62
LSB1	YGR136W	FAA3	P39002	694 aa		4.93	□□□□□ -1.62
LSB1	YGR136W	AKR1	P39010	764 aa		4.93	□□□□□ -1.62
LSB1	YGR136W	ADI1	Q03677	179 aa		4.93	□□□□□ -1.62
LSB1	YGR136W	PMT7	Q06644	662 aa		4.93	□□□□□ -1.62
LSB1	YGR136W	REC8	Q12188	680 aa		4.93	□□□□□ -1.62
LSB1	YGR136W	TOP1	P04786	769 aa		4.92	□□□□□ -1.62
LSB1	YGR136W	CDC34	P14682	295 aa		4.92	□□□□□ -1.62
LSB1	YGR136W	ICL1	P28240	557 aa	Predicted RBP	4.92	□□□□□ -1.62
LSB1	YGR136W	SRP40	P32583	406 aa	Predicted RBP	4.92	□□□□□ -1.62
LSB1	YGR136W	FRD1	P32614	470 aa	Known RBP	4.92	□□□□□ -1.62
LSB1	YGR136W	BSD2	P38356	321 aa		4.92	□□□□□ -1.62
LSB1	YGR136W	NUT1	P53114	1132 aa		4.92	□□□□□ -1.62
LSB1	YGR136W	CWC24	P53769	259 aa		4.92	□□□□□ -1.62
LSB1	YGR136W	ERO1	Q03103	563 aa		4.92	□□□□□ -1.62
LSB1	YGR136W	CSI1	Q04368	295 aa		4.92	□□□□□ -1.62
LSB1	YGR136W	MRP7	P12687	371 aa		4.91	□□□□□ -1.62
LSB1	YGR136W	YKU70	P32807	602 aa		4.91	□□□□□ -1.62
LSB1	YGR136W	NUP133	P36161	1157 aa		4.91	□□□□□ -1.62
LSB1	YGR136W	YNG2	P38806	282 aa	Known RBP	4.91	□□□□□ -1.62
LSB1	YGR136W	YIL165C	P40446	119 aa		4.91	□□□□□ -1.62
LSB1	YGR136W	ENT3	P47160	408 aa		4.91	□□□□□ -1.62
LSB1	YGR136W	SOK2	P53438	785 aa	Predicted RBP	4.91	□□□□□ -1.62
LSB1	YGR136W	FCP1	Q03254	732 aa		4.91	□□□□□ -1.62
LSB1	YGR136W	RPN4	Q03465	531 aa		4.91	□□□□□ -1.62
LSB1	YGR136W	RSC2	Q06488	889 aa		4.91	□□□□□ -1.62
LSB1	YGR136W	TMA46	Q12000	345 aa	Known RBP	4.91	□□□□□ -1.62
LSB1	YGR136W	RNQ1	P25367	405 aa		4.9	□□□□□ -1.63
LSB1	YGR136W	RRP14	P36080	434 aa	Known RBP	4.9	□□□□□ -1.63
LSB1	YGR136W	SPC42	P36094	363 aa		4.9	□□□□□ -1.63
LSB1	YGR136W	SHU2	P38957	223 aa		4.9	□□□□□ -1.63
LSB1	YGR136W	SNF7	P39929	240 aa	Known RBP	4.9	□□□□□ -1.63
LSB1	YGR136W	SPO1	P53541	631 aa		4.9	□□□□□ -1.63
LSB1	YGR136W	CTR9	P89105	1077 aa		4.9	□□□□□ -1.63
LSB1	YGR136W	ULP1	Q02724	621 aa		4.9	□□□□□ -1.63
LSB1	YGR136W	SYF1	Q04048	859 aa	Predicted RBP	4.9	□□□□□ -1.63
LSB1	YGR136W	TOS4	Q06266	489 aa		4.9	□□□□□ -1.63
LSB1	YGR136W	EMG1	Q06287	252 aa	Known RBP	4.9	□□□□□ -1.63
LSB1	YGR136W	YDR306C	Q06640	478 aa		4.9	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 31.6 ms