RNA–Protein interactions for RNA: YGL172W

NUP49, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP49, Length 1,419 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP49YGL172W MSP1P28737 362 aa7.55□□□□□ -1.2
NUP49YGL172W RFT1P38206 574 aaPredicted RBP7.55□□□□□ -1.2
NUP49YGL172W BIM1P40013 344 aa7.55□□□□□ -1.2
NUP49YGL172W GPD2P41911 440 aaKnown RBP7.55□□□□□ -1.2
NUP49YGL172W BRE2P43132 505 aa7.55□□□□□ -1.2
NUP49YGL172W YJR107WP47145 328 aa7.55□□□□□ -1.2
NUP49YGL172W YMR1P47147 688 aaKnown RBP RIP-Chip data7.55□□□□□ -1.2not detected
NUP49YGL172W RPS7BP48164 190 aaKnown RBP7.55□□□□□ -1.2
NUP49YGL172W UBA2P52488 636 aa7.55□□□□□ -1.2
NUP49YGL172W CUE3P53137 624 aaKnown RBP7.55□□□□□ -1.2
NUP49YGL172W ZPR1P53303 486 aaKnown RBP7.55□□□□□ -1.2
NUP49YGL172W CBK1P53894 756 aa7.55□□□□□ -1.2
NUP49YGL172W PGA2P53903 129 aa7.55□□□□□ -1.2
NUP49YGL172W EAF7P53911 425 aaKnown RBP7.55□□□□□ -1.2
NUP49YGL172W HAP5Q02516 242 aa7.55□□□□□ -1.2
NUP49YGL172W COG8Q04632 607 aa7.55□□□□□ -1.2
NUP49YGL172W PHM6Q05637 104 aa7.55□□□□□ -1.2
NUP49YGL172W SUT2Q12286 268 aa7.55□□□□□ -1.2
NUP49YGL172W ECM29P38737 1868 aa7.54□□□□□ -1.2
NUP49YGL172W PDC1P06169 563 aaKnown RBP7.54□□□□□ -1.2
NUP49YGL172W CLN3P13365 580 aa7.54□□□□□ -1.2
NUP49YGL172W DBP1P24784 617 aaKnown RBP7.54□□□□□ -1.2
NUP49YGL172W SUV3P32580 737 aa7.54□□□□□ -1.2
NUP49YGL172W ELM1P32801 640 aa7.54□□□□□ -1.2
NUP49YGL172W BCS1P32839 456 aa7.54□□□□□ -1.2
NUP49YGL172W DID4P36108 232 aa7.54□□□□□ -1.2
NUP49YGL172W PET10P36139 283 aa7.54□□□□□ -1.2
NUP49YGL172W PAM1P37304 830 aaKnown RBP7.54□□□□□ -1.2
NUP49YGL172W HMF1P40037 129 aaKnown RBP7.54□□□□□ -1.2
NUP49YGL172W VMS1Q04311 632 aaKnown RBP7.54□□□□□ -1.2
NUP49YGL172W PSR2Q07949 397 aa7.54□□□□□ -1.2
NUP49YGL172W YLL058WQ12198 575 aa7.54□□□□□ -1.2
NUP49YGL172W DDP1Q99321 188 aaKnown RBP7.54□□□□□ -1.2
NUP49YGL172W FKS1P38631 1876 aaKnown RBP7.54□□□□□ -1.2
NUP49YGL172W CDC48P25694 835 aaKnown RBP7.53□□□□□ -1.2
NUP49YGL172W TVP38P36164 337 aa7.53□□□□□ -1.2
NUP49YGL172W FLR1P38124 548 aa7.53□□□□□ -1.2
NUP49YGL172W NOC2P39744 710 aaKnown RBP7.53□□□□□ -1.2
NUP49YGL172W ULP2P40537 1034 aaPredicted RBP7.53□□□□□ -1.2
NUP49YGL172W VNX1P42839 908 aa7.53□□□□□ -1.2
NUP49YGL172W DAK2P43550 591 aa7.53□□□□□ -1.2
NUP49YGL172W VPS62P53285 467 aa7.53□□□□□ -1.2
NUP49YGL172W GPI13Q07830 1017 aa7.53□□□□□ -1.2
NUP49YGL172W YEL076C-AP0CX16 216 aa7.52□□□□□ -1.2
NUP49YGL172W YLR464WP0CX17 216 aa7.52□□□□□ -1.2
NUP49YGL172W MAS2P11914 482 aa7.52□□□□□ -1.2
NUP49YGL172W SDH2P21801 266 aa7.52□□□□□ -1.2
NUP49YGL172W CDC15P27636 974 aa7.52□□□□□ -1.2
NUP49YGL172W BMH1P29311 267 aaKnown RBP7.52□□□□□ -1.2
NUP49YGL172W TIM23P32897 222 aa7.52□□□□□ -1.2
NUP49YGL172W SIP3P38717 1229 aa7.52□□□□□ -1.2
NUP49YGL172W PIH1P38768 344 aa7.52□□□□□ -1.2
NUP49YGL172W AFG3P39925 761 aa7.52□□□□□ -1.2
NUP49YGL172W YER130CP39959 443 aa7.52□□□□□ -1.2
NUP49YGL172W YEL076CP39971 216 aa7.52□□□□□ -1.2
NUP49YGL172W RSM25P40496 264 aa7.52□□□□□ -1.2
NUP49YGL172W SKP2P42843 763 aa7.52□□□□□ -1.2
NUP49YGL172W ROG3P43602 733 aa7.52□□□□□ -1.2
NUP49YGL172W SPP1Q03012 353 aa7.52□□□□□ -1.2
NUP49YGL172W GPA1P08539 472 aa7.52□□□□□ -1.21
NUP49YGL172W SRD1P09007 221 aa7.52□□□□□ -1.21
NUP49YGL172W YKT6P36015 200 aaKnown RBP7.52□□□□□ -1.21
NUP49YGL172W GPT2P36148 743 aa7.52□□□□□ -1.21
NUP49YGL172W KSP1P38691 1029 aaKnown RBP7.52□□□□□ -1.21
NUP49YGL172W RVS167P39743 482 aaKnown RBP7.52□□□□□ -1.21
NUP49YGL172W THI6P41835 540 aa7.52□□□□□ -1.21
NUP49YGL172W CSN12P47130 423 aa7.52□□□□□ -1.21
NUP49YGL172W YPT11P48559 417 aa7.52□□□□□ -1.21
NUP49YGL172W FOB1O13329 566 aa7.51□□□□□ -1.21
NUP49YGL172W CKA2P19454 339 aa7.51□□□□□ -1.21
NUP49YGL172W PRP22P24384 1145 aaKnown RBP7.51□□□□□ -1.21
NUP49YGL172W SAC6P32599 642 aaKnown RBP7.51□□□□□ -1.21
NUP49YGL172W LDH1P38139 375 aa7.51□□□□□ -1.21
NUP49YGL172W STS1P38637 319 aa7.51□□□□□ -1.21
NUP49YGL172W YEL025CP39991 1188 aa7.51□□□□□ -1.21
NUP49YGL172W FIS1P40515 155 aa7.51□□□□□ -1.21
NUP49YGL172W GUP1P53154 560 aa7.51□□□□□ -1.21
NUP49YGL172W DAK1P54838 584 aaKnown RBP7.51□□□□□ -1.21
NUP49YGL172W FUS2Q05670 677 aa7.51□□□□□ -1.21
NUP49YGL172W ETT1Q08421 412 aaKnown RBP7.51□□□□□ -1.21
NUP49YGL172W NCR1Q12200 1170 aa7.51□□□□□ -1.21
NUP49YGL172W MDM20Q12387 796 aaKnown RBP7.51□□□□□ -1.21
NUP49YGL172W TRS33Q99394 268 aa7.51□□□□□ -1.21
NUP49YGL172W PFK1P16861 987 aaKnown RBP7.5□□□□□ -1.21
NUP49YGL172W ISY1P21374 235 aaPredicted RBP7.5□□□□□ -1.21
NUP49YGL172W HIR1P32479 840 aa7.5□□□□□ -1.21
NUP49YGL172W PTC3P34221 468 aaKnown RBP7.5□□□□□ -1.21
NUP49YGL172W UIP5P36137 443 aa7.5□□□□□ -1.21
NUP49YGL172W ARL1P38116 183 aaKnown RBP7.5□□□□□ -1.21
NUP49YGL172W UBP14P38237 781 aaKnown RBP7.5□□□□□ -1.21
NUP49YGL172W RPN3P40016 523 aaKnown RBP7.5□□□□□ -1.21
NUP49YGL172W FYV10P40492 516 aa7.5□□□□□ -1.21
NUP49YGL172W VTC2P43585 828 aa7.5□□□□□ -1.21
NUP49YGL172W PSP2P50109 593 aaKnown RBP7.5□□□□□ -1.21
NUP49YGL172W MIP1P15801 1254 aa7.49□□□□□ -1.21
NUP49YGL172W ROX1P25042 368 aa7.49□□□□□ -1.21
NUP49YGL172W RPN12P32496 274 aa7.49□□□□□ -1.21
NUP49YGL172W KTR2P33550 425 aa7.49□□□□□ -1.21
NUP49YGL172W PPS1P38148 807 aa7.49□□□□□ -1.21
NUP49YGL172W NUP82P40368 713 aa7.49□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms