RNA–Protein interactions for RNA: YFL002C

SPB4, Transcript of Putative ATP-dependent RNA helicase, yeast

Gene SPB4, Length 1,821 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SPB4	YFL002C	PLC1	P32383	869 aa		4.96	□□□□□ -1.62
SPB4	YFL002C	LEM3	P42838	414 aa		4.96	□□□□□ -1.62
SPB4	YFL002C	UBP2	Q01476	1272 aa		4.96	□□□□□ -1.62
SPB4	YFL002C	YLR346C	Q06139	101 aa		4.96	□□□□□ -1.62
SPB4	YFL002C	SST2	P11972	698 aa	Known RBP	4.95	□□□□□ -1.62
SPB4	YFL002C	PCL2	P25693	308 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	SPC29	P33419	253 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	IES5	P40060	125 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	GCV1	P48015	400 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	MET13	P53128	600 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	DUS3	Q06053	668 aa	Known RBP	4.95	□□□□□ -1.62
SPB4	YFL002C	MPD2	Q99316	277 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	YEF3	P16521	1044 aa	Known RBP	4.95	□□□□□ -1.62
SPB4	YFL002C	PPH3	P32345	308 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	PNT1	P38969	423 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	ACO2	P39533	789 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	PRK1	P40494	810 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	YNL034W	P53963	612 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	YNL018C	P53976	612 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	SVL3	Q03088	825 aa	Known RBP	4.95	□□□□□ -1.62
SPB4	YFL002C	BUL2	Q03758	920 aa	Known RBP	4.95	□□□□□ -1.62
SPB4	YFL002C	LCD1	Q04377	747 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	LAP2	Q10740	671 aa		4.95	□□□□□ -1.62
SPB4	YFL002C	RAD18	P10862	487 aa		4.94	□□□□□ -1.62
SPB4	YFL002C	SFL1	P20134	766 aa		4.94	□□□□□ -1.62
SPB4	YFL002C	TRZ1	P36159	838 aa	Predicted RBP	4.94	□□□□□ -1.62
SPB4	YFL002C	SPO74	P45819	413 aa		4.94	□□□□□ -1.62
SPB4	YFL002C	UBX4	P54730	416 aa		4.94	□□□□□ -1.62
SPB4	YFL002C	RET1	P22276	1149 aa	Known RBP	4.93	□□□□□ -1.62
SPB4	YFL002C	MTC2	P34246	357 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	YRO2	P38079	344 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	REI1	P38344	393 aa	Predicted RBP	4.93	□□□□□ -1.62
SPB4	YFL002C	OSH7	P38755	437 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	YAR028W	P39548	234 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	ERP2	P39704	215 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	CAF16	P43569	289 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	VPS53	P47061	822 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	PIP2	P52960	996 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	YGR035C	P53222	116 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	RPL11A	P0C0W9	174 aa	Known RBP	4.93	□□□□□ -1.62
SPB4	YFL002C	YER152C	P10356	443 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	PGI1	P12709	554 aa	Known RBP	4.93	□□□□□ -1.62
SPB4	YFL002C	RPA135	P22138	1203 aa	Known RBP	4.93	□□□□□ -1.62
SPB4	YFL002C	TRK2	P28584	889 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	TFC4	P33339	1025 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	DUG1	P43616	481 aa	Known RBP	4.93	□□□□□ -1.62
SPB4	YFL002C	YJR096W	P47137	282 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	SRP1	Q02821	542 aa	Known RBP	4.93	□□□□□ -1.62
SPB4	YFL002C	COG8	Q04632	607 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	YPL260W	Q08977	551 aa		4.93	□□□□□ -1.62
SPB4	YFL002C	RPL11B	Q3E757	174 aa	Predicted RBP	4.93	□□□□□ -1.62
SPB4	YFL002C	DIT1	P21623	536 aa		4.92	□□□□□ -1.62
SPB4	YFL002C	DBP2	P24783	546 aa	Known RBP	4.92	□□□□□ -1.62
SPB4	YFL002C	CKB2	P38930	258 aa		4.92	□□□□□ -1.62
SPB4	YFL002C	YGR283C	P53336	341 aa	Predicted RBP	4.92	□□□□□ -1.62
SPB4	YFL002C	NAM8	Q00539	523 aa	Known RBP	4.92	□□□□□ -1.62
SPB4	YFL002C	YTM1	Q12024	460 aa	Predicted RBP	4.92	□□□□□ -1.62
SPB4	YFL002C	CDC12	P32468	407 aa	Known RBP	4.91	□□□□□ -1.62
SPB4	YFL002C	PRP19	P32523	503 aa	Known RBP	4.91	□□□□□ -1.62
SPB4	YFL002C	AFR1	P33304	620 aa		4.91	□□□□□ -1.62
SPB4	YFL002C	REC104	P33323	182 aa		4.91	□□□□□ -1.62
SPB4	YFL002C	HSP78	P33416	811 aa		4.91	□□□□□ -1.62
SPB4	YFL002C	STO1	P34160	861 aa	Known RBP	4.91	□□□□□ -1.62
SPB4	YFL002C	HSE1	P38753	452 aa		4.91	□□□□□ -1.62
SPB4	YFL002C	TOK1	P40310	691 aa		4.91	□□□□□ -1.62
SPB4	YFL002C	MET14	Q02196	202 aa		4.91	□□□□□ -1.62
SPB4	YFL002C	URN1	Q06525	465 aa	Known RBP	4.91	□□□□□ -1.62
SPB4	YFL002C	GAL1	P04385	528 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	AEP2	P22136	580 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	FPS1	P23900	669 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	PCM1	P38628	557 aa	Known RBP	4.9	□□□□□ -1.62
SPB4	YFL002C	YIR007W	P40566	764 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	GYP8	P43570	497 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	TY4A-J	P47023	414 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	SPC105	P53148	917 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	SCW11	P53189	542 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	PBP1	P53297	722 aa	Known RBP	4.9	□□□□□ -1.62
SPB4	YFL002C	SOK2	P53438	785 aa	Predicted RBP	4.9	□□□□□ -1.62
SPB4	YFL002C	ATP25	Q03153	612 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	TY1A-DR2	Q03964	440 aa	Known RBP	4.9	□□□□□ -1.62
SPB4	YFL002C	COG4	Q06096	861 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	RSC3	Q06639	885 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	GUD1	Q07729	489 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	RRP6	Q12149	733 aa	Known RBP	4.9	□□□□□ -1.62
SPB4	YFL002C	YLL054C	Q12244	843 aa		4.9	□□□□□ -1.62
SPB4	YFL002C	NFS1	P25374	497 aa		4.9	□□□□□ -1.63
SPB4	YFL002C	QNS1	P38795	714 aa	Known RBP	4.9	□□□□□ -1.63
SPB4	YFL002C	OAF1	P39720	1047 aa	Predicted RBP	4.9	□□□□□ -1.63
SPB4	YFL002C	MXR1	P40029	184 aa		4.9	□□□□□ -1.63
SPB4	YFL002C	GZF3	P42944	551 aa	Known RBP	4.9	□□□□□ -1.63
SPB4	YFL002C	YGR045C	P53229	120 aa		4.9	□□□□□ -1.63
SPB4	YFL002C	DAM1	P53267	343 aa		4.9	□□□□□ -1.63
SPB4	YFL002C	AVO1	Q08236	1176 aa		4.9	□□□□□ -1.63
SPB4	YFL002C	PTP2	P29461	750 aa		4.89	□□□□□ -1.63
SPB4	YFL002C	ERT1	P38140	529 aa		4.89	□□□□□ -1.63
SPB4	YFL002C	NIT2	P47016	307 aa		4.89	□□□□□ -1.63
SPB4	YFL002C	CCM1	P48237	864 aa	Predicted RBP	4.89	□□□□□ -1.63
SPB4	YFL002C	KIP3	P53086	805 aa	Known RBP	4.89	□□□□□ -1.63
SPB4	YFL002C	YMR265C	Q03508	461 aa	Known RBP	4.89	□□□□□ -1.63
SPB4	YFL002C	ALG6	Q12001	544 aa	Known RBP	4.89	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 9.3 ms