RNA–Protein interactions for RNA: YEL031W

SPF1, Transcript of P-type ATPase, ion transporter of the ER membrane, yeastyeast

Gene SPF1, Length 3,648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPF1YEL031W SEY1Q99287 776 aa2.57□□□□□ -2
SPF1YEL031W NPL6P32832 435 aa2.57□□□□□ -2
SPF1YEL031W BMH2P34730 273 aaKnown RBP2.57□□□□□ -2
SPF1YEL031W TYS1P36421 394 aaKnown RBP2.57□□□□□ -2
SPF1YEL031W UBP12P39538 1254 aa2.57□□□□□ -2
SPF1YEL031W YJR142WP47173 342 aa2.57□□□□□ -2
SPF1YEL031W INP52P50942 1183 aa2.57□□□□□ -2
SPF1YEL031W MRPS35P53292 345 aa2.57□□□□□ -2
SPF1YEL031W YNL247WP53852 767 aaKnown RBP2.57□□□□□ -2
SPF1YEL031W TMA20P89886 181 aaPredicted RBP2.57□□□□□ -2
SPF1YEL031W SFH1Q06168 426 aa2.57□□□□□ -2
SPF1YEL031W GAS4Q08271 471 aa2.57□□□□□ -2
SPF1YEL031W VHS3Q08438 674 aa2.57□□□□□ -2
SPF1YEL031W ADH4P10127 382 aa2.56□□□□□ -2
SPF1YEL031W SSA2P10592 639 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W CLB3P24870 427 aa2.56□□□□□ -2
SPF1YEL031W HXT1P32465 570 aa2.56□□□□□ -2
SPF1YEL031W NPL4P33755 580 aa2.56□□□□□ -2
SPF1YEL031W OAF3P36023 863 aa2.56□□□□□ -2
SPF1YEL031W PSY4P38193 441 aa2.56□□□□□ -2
SPF1YEL031W SMF1P38925 575 aa2.56□□□□□ -2
SPF1YEL031W NUP60P39705 539 aa2.56□□□□□ -2
SPF1YEL031W PEA2P40091 420 aa2.56□□□□□ -2
SPF1YEL031W MET18P40469 1032 aa2.56□□□□□ -2
SPF1YEL031W LAM5P43560 674 aa2.56□□□□□ -2
SPF1YEL031W DAS1P47005 663 aa2.56□□□□□ -2
SPF1YEL031W RPC17P47076 161 aa2.56□□□□□ -2
SPF1YEL031W CCM1P48237 864 aaPredicted RBP2.56□□□□□ -2
SPF1YEL031W HFM1P51979 1187 aa2.56□□□□□ -2
SPF1YEL031W RAT1Q02792 1006 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W TMA16Q08687 178 aa2.56□□□□□ -2
SPF1YEL031W SLP1Q12232 587 aa2.56□□□□□ -2
SPF1YEL031W RUP1Q12242 671 aa2.56□□□□□ -2
SPF1YEL031W NCA2Q12374 616 aa2.56□□□□□ -2
SPF1YEL031W PPH3P32345 308 aa2.56□□□□□ -2
SPF1YEL031W GEF1P37020 779 aa2.56□□□□□ -2
SPF1YEL031W AMN1P38285 549 aaPredicted RBP2.56□□□□□ -2
SPF1YEL031W HSM3P38348 480 aa2.56□□□□□ -2
SPF1YEL031W SIP3P38717 1229 aa2.56□□□□□ -2
SPF1YEL031W VPS29P38759 282 aa2.56□□□□□ -2
SPF1YEL031W SHC1P39000 512 aa2.56□□□□□ -2
SPF1YEL031W YFR006WP43590 535 aa2.56□□□□□ -2
SPF1YEL031W YKR005CQ02203 525 aa2.56□□□□□ -2
SPF1YEL031W GDE1Q02979 1223 aa2.56□□□□□ -2
SPF1YEL031W YML108WQ03759 105 aa2.56□□□□□ -2
SPF1YEL031W TRS120Q04183 1289 aa2.56□□□□□ -2
SPF1YEL031W YDR341CQ05506 607 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W SMC5Q08204 1093 aa2.56□□□□□ -2
SPF1YEL031W SLX4Q12098 748 aa2.56□□□□□ -2
SPF1YEL031W SCM3Q12334 223 aa2.56□□□□□ -2
SPF1YEL031W ZRT2Q12436 422 aa2.56□□□□□ -2
SPF1YEL031W REP1P03871 373 aa2.56□□□□□ -2
SPF1YEL031W LPD1P09624 499 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W PRP4P20053 465 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W ILV6P25605 309 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W GCG1P32656 232 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W SMC1P32908 1225 aa2.56□□□□□ -2
SPF1YEL031W DBP7P36120 742 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W MET1P36150 593 aa2.56□□□□□ -2
SPF1YEL031W NUP133P36161 1157 aa2.56□□□□□ -2
SPF1YEL031W TIF4632P39936 914 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W ATG3P40344 310 aa2.56□□□□□ -2
SPF1YEL031W SPR3P41901 512 aa2.56□□□□□ -2
SPF1YEL031W NGL3Q03210 505 aa2.56□□□□□ -2
SPF1YEL031W KRE28Q04431 385 aa2.56□□□□□ -2
SPF1YEL031W SUB2Q07478 446 aaKnown RBP2.56□□□□□ -2
SPF1YEL031W PIF1P07271 859 aa2.55□□□□□ -2
SPF1YEL031W RAD4P14736 754 aa2.55□□□□□ -2
SPF1YEL031W CLN1P20437 546 aa2.55□□□□□ -2
SPF1YEL031W CLB2P24869 491 aa2.55□□□□□ -2
SPF1YEL031W SEC65P29478 273 aa2.55□□□□□ -2
SPF1YEL031W SSO1P32867 290 aa2.55□□□□□ -2
SPF1YEL031W RPC34P32910 317 aa2.55□□□□□ -2
SPF1YEL031W JNM1P36224 373 aa2.55□□□□□ -2
SPF1YEL031W LAM1P38851 1228 aa2.55□□□□□ -2
SPF1YEL031W CRG1P38892 291 aaRIP-Chip data2.55□□□□□ -2not detected
SPF1YEL031W SCS2P40075 244 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W VFA1P40080 203 aa2.55□□□□□ -2
SPF1YEL031W JEM1P40358 645 aa2.55□□□□□ -2
SPF1YEL031W REF2P42073 533 aaPredicted RBP2.55□□□□□ -2
SPF1YEL031W LSC1P53598 329 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W MSH6Q03834 1242 aa2.55□□□□□ -2
SPF1YEL031W MTC5Q03897 1148 aa2.55□□□□□ -2
SPF1YEL031W ERB1Q04660 807 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W URB1P34241 1764 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W YPR089WO13585 888 aa2.55□□□□□ -2
SPF1YEL031W RPS24AP0CX31 135 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W RPS24BP0CX32 135 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W PET122P10355 254 aa2.55□□□□□ -2
SPF1YEL031W SNA3P14359 133 aa2.55□□□□□ -2
SPF1YEL031W URA4P20051 364 aa2.55□□□□□ -2
SPF1YEL031W RAD57P25301 460 aa2.55□□□□□ -2
SPF1YEL031W ITR2P30606 609 aa2.55□□□□□ -2
SPF1YEL031W PYC2P32327 1180 aaKnown RBP2.55□□□□□ -2
SPF1YEL031W SEC66P33754 206 aa2.55□□□□□ -2
SPF1YEL031W YBL055CP34220 418 aaPredicted RBP2.55□□□□□ -2
SPF1YEL031W REV7P38927 245 aa2.55□□□□□ -2
SPF1YEL031W SLX8P40072 274 aa2.55□□□□□ -2
SPF1YEL031W SYG1P40528 902 aa2.55□□□□□ -2
SPF1YEL031W ALG2P43636 503 aa2.55□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 54.6 ms