RNA–Protein interactions for RNA: YDR395W

SXM1, Transcript of Nuclear transport factor (karyopherin), yeastyeast

Gene SXM1, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SXM1YDR395W TOM1Q03280 3268 aa1.81□□□□□ -2.12
SXM1YDR395W BET2P20133 325 aa1.81□□□□□ -2.12
SXM1YDR395W PRE10P21242 288 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12not detected
SXM1YDR395W RKM3P38222 552 aa1.81□□□□□ -2.12
SXM1YDR395W IES5P40060 125 aa1.81□□□□□ -2.12
SXM1YDR395W MDJ2P42834 146 aa1.81□□□□□ -2.12
SXM1YDR395W ATF2P53296 535 aa1.81□□□□□ -2.12
SXM1YDR395W NRD1P53617 575 aaKnown RBP RIP-Chip data1.81□□□□□ -2.12 RIP-Chip
SXM1YDR395W NSE3Q05541 303 aa1.81□□□□□ -2.12
SXM1YDR395W PPM2Q08282 695 aa1.81□□□□□ -2.12
SXM1YDR395W VPS5Q92331 675 aa1.81□□□□□ -2.12
SXM1YDR395W CDC11P32458 415 aa1.8□□□□□ -2.12
SXM1YDR395W RGT1P32862 1170 aa1.8□□□□□ -2.12
SXM1YDR395W YJL049WP47048 450 aa1.8□□□□□ -2.12
SXM1YDR395W CSN12P47130 423 aa1.8□□□□□ -2.12
SXM1YDR395W PHM7Q12252 991 aa1.8□□□□□ -2.12
SXM1YDR395W SNU66Q12420 587 aaPredicted RBP1.8□□□□□ -2.12
SXM1YDR395W HIP1P06775 603 aa1.8□□□□□ -2.12
SXM1YDR395W HSC82P15108 705 aaKnown RBP1.8□□□□□ -2.12
SXM1YDR395W PUP3P25451 205 aaKnown RBP1.8□□□□□ -2.12
SXM1YDR395W SEC6P32844 805 aa1.8□□□□□ -2.12
SXM1YDR395W PEP12P32854 288 aa1.8□□□□□ -2.12
SXM1YDR395W ERP5P38819 212 aa1.8□□□□□ -2.12
SXM1YDR395W UME6P39001 836 aa1.8□□□□□ -2.12
SXM1YDR395W POL32P47110 350 aa1.8□□□□□ -2.12
SXM1YDR395W BFA1P47113 574 aa1.8□□□□□ -2.12
SXM1YDR395W YJR142WP47173 342 aa1.8□□□□□ -2.12
SXM1YDR395W PKH1Q03407 766 aa1.8□□□□□ -2.12
SXM1YDR395W SPO71Q03868 1245 aa1.8□□□□□ -2.12
SXM1YDR395W POB3Q04636 552 aaKnown RBP1.8□□□□□ -2.12
SXM1YDR395W PEX19Q07418 342 aa1.8□□□□□ -2.12
SXM1YDR395W CFT2Q12102 859 aaPredicted RBP1.8□□□□□ -2.12
SXM1YDR395W PUS1Q12211 544 aaKnown RBP1.8□□□□□ -2.12
SXM1YDR395W RRI2Q12348 645 aa1.8□□□□□ -2.12
SXM1YDR395W ERP4Q12450 207 aa1.8□□□□□ -2.12
SXM1YDR395W YBL113CQ7M4S9 792 aa1.8□□□□□ -2.12
SXM1YDR395W RNA1P11745 407 aaKnown RBP1.79□□□□□ -2.12
SXM1YDR395W KAR1P11927 433 aa1.79□□□□□ -2.12
SXM1YDR395W MBR1P23493 339 aa1.79□□□□□ -2.12
SXM1YDR395W SEC8P32855 1065 aa1.79□□□□□ -2.12
SXM1YDR395W YKL050CP35736 922 aa1.79□□□□□ -2.12
SXM1YDR395W CSE4P36012 229 aa1.79□□□□□ -2.12
SXM1YDR395W NIT1P40447 199 aa1.79□□□□□ -2.12
SXM1YDR395W NSG2P53898 299 aa1.79□□□□□ -2.12
SXM1YDR395W ISU1Q03020 165 aa1.79□□□□□ -2.12
SXM1YDR395W ESF1Q06344 628 aaKnown RBP1.79□□□□□ -2.12
SXM1YDR395W MRC1P25588 1096 aa1.79□□□□□ -2.12
SXM1YDR395W SHM1P37292 490 aaPredicted RBP1.79□□□□□ -2.12
SXM1YDR395W TPS3P38426 1054 aaKnown RBP1.79□□□□□ -2.12
SXM1YDR395W YHL050CP38721 697 aa1.79□□□□□ -2.12
SXM1YDR395W YHR219WP38900 624 aa1.79□□□□□ -2.12
SXM1YDR395W YTA12P40341 825 aa1.79□□□□□ -2.12
SXM1YDR395W RIM21P48565 533 aa1.79□□□□□ -2.12
SXM1YDR395W LIF1P53150 421 aa1.79□□□□□ -2.12
SXM1YDR395W UBP3Q01477 912 aaKnown RBP RIP-Chip data1.79□□□□□ -2.12 RIP-Chip
SXM1YDR395W MEH1Q02205 184 aa1.79□□□□□ -2.12
SXM1YDR395W VPS16Q03308 798 aa1.79□□□□□ -2.12
SXM1YDR395W THI72Q08579 599 aa1.79□□□□□ -2.12
SXM1YDR395W MNL2Q12205 849 aa1.79□□□□□ -2.12
SXM1YDR395W ECM29P38737 1868 aa1.79□□□□□ -2.12
SXM1YDR395W LAM4P38800 1345 aa1.78□□□□□ -2.12
SXM1YDR395W CBP1P07252 654 aa1.78□□□□□ -2.12
SXM1YDR395W PIF1P07271 859 aa1.78□□□□□ -2.12
SXM1YDR395W SWI6P09959 803 aa1.78□□□□□ -2.12
SXM1YDR395W MET4P32389 672 aa1.78□□□□□ -2.12
SXM1YDR395W PPG1P32838 368 aa1.78□□□□□ -2.12
SXM1YDR395W CYM1P32898 989 aa1.78□□□□□ -2.12
SXM1YDR395W MKS1P34072 584 aa1.78□□□□□ -2.12
SXM1YDR395W TGL4P36165 910 aa1.78□□□□□ -2.12
SXM1YDR395W PBP2P38151 413 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
SXM1YDR395W HAL5P38970 855 aaKnown RBP1.78□□□□□ -2.12
SXM1YDR395W SNF7P39929 240 aaKnown RBP1.78□□□□□ -2.12
SXM1YDR395W IES1P43579 692 aa1.78□□□□□ -2.12
SXM1YDR395W YGR021WP53212 290 aa1.78□□□□□ -2.12
SXM1YDR395W PEX8P53248 589 aa1.78□□□□□ -2.12
SXM1YDR395W PKH3Q03306 898 aaPredicted RBP1.78□□□□□ -2.12
SXM1YDR395W TLG1Q03322 224 aa1.78□□□□□ -2.12
SXM1YDR395W UTP14Q04500 899 aaKnown RBP1.78□□□□□ -2.12
SXM1YDR395W PIG1Q06216 648 aa1.78□□□□□ -2.12
SXM1YDR395W TDA6Q06466 467 aa1.78□□□□□ -2.12
SXM1YDR395W FRA1Q07825 749 aa1.78□□□□□ -2.12
SXM1YDR395W YOR378WQ08902 515 aa1.78□□□□□ -2.12
SXM1YDR395W HRP1Q99383 534 aaKnown RBP1.78□□□□□ -2.12
SXM1YDR395W STI1P15705 589 aaKnown RBP RIP-Chip data1.78□□□□□ -2.12not detected
SXM1YDR395W DIT1P21623 536 aa1.78□□□□□ -2.12
SXM1YDR395W GDE1Q02979 1223 aa1.78□□□□□ -2.12
SXM1YDR395W OYE2Q03558 400 aaKnown RBP1.78□□□□□ -2.12
SXM1YDR395W SYF1Q04048 859 aaPredicted RBP1.78□□□□□ -2.12
SXM1YDR395W YLR257WQ06146 321 aaKnown RBP1.78□□□□□ -2.12
SXM1YDR395W JIP5Q06214 492 aaPredicted RBP1.78□□□□□ -2.12
SXM1YDR395W RRP9Q06506 573 aaKnown RBP1.78□□□□□ -2.12
SXM1YDR395W NSE1Q07913 336 aa1.78□□□□□ -2.12
SXM1YDR395W RTP1Q12751 981 aa1.78□□□□□ -2.12
SXM1YDR395W YDR461C-AQ2V2P7 80 aa1.78□□□□□ -2.12
SXM1YDR395W ENO1P00924 437 aaKnown RBP1.77□□□□□ -2.13
SXM1YDR395W RPS31P05759 152 aaKnown RBP1.77□□□□□ -2.13
SXM1YDR395W TRX2P22803 104 aaKnown RBP1.77□□□□□ -2.13
SXM1YDR395W DPB3P27344 201 aa1.77□□□□□ -2.13
SXM1YDR395W OCT1P35999 772 aa1.77□□□□□ -2.13
SXM1YDR395W MUM2P38236 366 aa1.77□□□□□ -2.13
Retrieved 100 of 5,963 RNA–protein pairs in 124.6 ms