RNA–Protein interactions for RNA: YDR328C

SKP1, Transcript of Evolutionarily conserved kinetochore protein, yeast

Gene SKP1, Length 585 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SKP1	YDR328C	YMR321C	Q04898	105 aa		8.07	□□□□□ -1.12
SKP1	YDR328C	AFT2	Q08957	416 aa		8.07	□□□□□ -1.12
SKP1	YDR328C	TFC8	Q12308	588 aa		8.07	□□□□□ -1.12
SKP1	YDR328C	SRD1	P09007	221 aa		8.06	□□□□□ -1.12
SKP1	YDR328C	PFK1	P16861	987 aa	Known RBP	8.06	□□□□□ -1.12
SKP1	YDR328C	YUR1	P26725	428 aa		8.06	□□□□□ -1.12
SKP1	YDR328C	RAM2	P29703	316 aa		8.06	□□□□□ -1.12
SKP1	YDR328C	RGT1	P32862	1170 aa		8.06	□□□□□ -1.12
SKP1	YDR328C	ADE17	P38009	592 aa	Known RBP	8.06	□□□□□ -1.12
SKP1	YDR328C	PSY4	P38193	441 aa		8.06	□□□□□ -1.12
SKP1	YDR328C	HMF1	P40037	129 aa	Known RBP	8.06	□□□□□ -1.12
SKP1	YDR328C	ULP2	P40537	1034 aa	Predicted RBP	8.06	□□□□□ -1.12
SKP1	YDR328C	ATG1	P53104	897 aa		8.06	□□□□□ -1.12
SKP1	YDR328C	ZPR1	P53303	486 aa	Known RBP	8.06	□□□□□ -1.12
SKP1	YDR328C	SEC5	P89102	971 aa		8.06	□□□□□ -1.12
SKP1	YDR328C	WAR1	Q03631	944 aa		8.06	□□□□□ -1.12
SKP1	YDR328C	CRD1	Q07560	283 aa		8.06	□□□□□ -1.12
SKP1	YDR328C	TVP38	P36164	337 aa		8.05	□□□□□ -1.12
SKP1	YDR328C	UBP15	P50101	1230 aa		8.05	□□□□□ -1.12
SKP1	YDR328C	GFD1	Q04839	188 aa	Known RBP	8.05	□□□□□ -1.12
SKP1	YDR328C	YDL057W	Q07379	328 aa		8.05	□□□□□ -1.12
SKP1	YDR328C	MSC6	Q08818	692 aa	Known RBP	8.05	□□□□□ -1.12
SKP1	YDR328C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	8.04	□□□□□ -1.12	not detected
SKP1	YDR328C	PGM2	P37012	569 aa	Known RBP	8.04	□□□□□ -1.12
SKP1	YDR328C	HUL4	P40985	892 aa		8.04	□□□□□ -1.12
SKP1	YDR328C	TFG2	P41896	400 aa	Predicted RBP	8.04	□□□□□ -1.12
SKP1	YDR328C	AIP1	P46680	615 aa	Known RBP	8.04	□□□□□ -1.12
SKP1	YDR328C	SCS3	P53012	380 aa		8.04	□□□□□ -1.12
SKP1	YDR328C	HUL5	P53119	910 aa		8.04	□□□□□ -1.12
SKP1	YDR328C	LSC2	P53312	427 aa		8.04	□□□□□ -1.12
SKP1	YDR328C	HCR1	Q05775	265 aa	Known RBP	8.04	□□□□□ -1.12
SKP1	YDR328C	SPP382	Q06411	708 aa	Predicted RBP	8.04	□□□□□ -1.12
SKP1	YDR328C	TLG2	Q08144	397 aa		8.04	□□□□□ -1.12
SKP1	YDR328C	TMA16	Q08687	178 aa		8.04	□□□□□ -1.12
SKP1	YDR328C	TCO89	Q08921	799 aa		8.04	□□□□□ -1.12
SKP1	YDR328C	TRM11	Q12463	433 aa		8.04	□□□□□ -1.12
SKP1	YDR328C	YKL091C	P33324	310 aa	Known RBP	8.03	□□□□□ -1.12
SKP1	YDR328C	MIC60	P36112	540 aa		8.03	□□□□□ -1.12
SKP1	YDR328C	PPS1	P38148	807 aa		8.03	□□□□□ -1.12
SKP1	YDR328C	MET7	Q08645	548 aa		8.03	□□□□□ -1.12
SKP1	YDR328C	TCP1	P12612	559 aa	Known RBP	8.02	□□□□□ -1.13
SKP1	YDR328C	PSO2	P30620	661 aa		8.02	□□□□□ -1.13
SKP1	YDR328C	TIM23	P32897	222 aa		8.02	□□□□□ -1.13
SKP1	YDR328C	BIM1	P40013	344 aa		8.02	□□□□□ -1.13
SKP1	YDR328C	RPN3	P40016	523 aa	Known RBP	8.02	□□□□□ -1.13
SKP1	YDR328C	NCS6	P53088	359 aa		8.02	□□□□□ -1.13
SKP1	YDR328C	ARK1	P53974	638 aa		8.02	□□□□□ -1.13
SKP1	YDR328C	EBS1	Q03466	884 aa	Known RBP	8.02	□□□□□ -1.13
SKP1	YDR328C	CUR1	Q06469	252 aa		8.02	□□□□□ -1.13
SKP1	YDR328C	YOL075C	Q08234	1294 aa		8.02	□□□□□ -1.13
SKP1	YDR328C	YDR461C-A	Q2V2P7	80 aa		8.02	□□□□□ -1.13
SKP1	YDR328C	MOT1	P32333	1867 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	CDC37	P06101	506 aa	Known RBP	8.01	□□□□□ -1.13
SKP1	YDR328C	MAK16	P10962	306 aa	Predicted RBP	8.01	□□□□□ -1.13
SKP1	YDR328C	PCK1	P10963	549 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	POX1	P13711	748 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	MRC1	P25588	1096 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	MCM2	P29469	868 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	RME1	P32338	300 aa	Known RBP	8.01	□□□□□ -1.13
SKP1	YDR328C	YET1	P35723	206 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	PXL1	P36166	706 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	YEL025C	P39991	1188 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	YFL034W	P43564	1073 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	VPS53	P47061	822 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	RPS7B	P48164	190 aa	Known RBP	8.01	□□□□□ -1.13
SKP1	YDR328C	NBP1	P52919	319 aa	Predicted RBP	8.01	□□□□□ -1.13
SKP1	YDR328C	CAF130	P53280	1122 aa	Predicted RBP	8.01	□□□□□ -1.13
SKP1	YDR328C	NCS2	P53923	493 aa	Predicted RBP	8.01	□□□□□ -1.13
SKP1	YDR328C	ROD1	Q02805	837 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	YPL216W	Q08964	1102 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	YPL277C	Q08989	487 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	ICL2	Q12031	575 aa		8.01	□□□□□ -1.13
SKP1	YDR328C	OM45	P16547	393 aa		8	□□□□□ -1.13
SKP1	YDR328C	KIN82	P25341	720 aa		8	□□□□□ -1.13
SKP1	YDR328C	TRK2	P28584	889 aa		8	□□□□□ -1.13
SKP1	YDR328C	UBP5	P39944	805 aa		8	□□□□□ -1.13
SKP1	YDR328C	VID30	P53076	958 aa		8	□□□□□ -1.13
SKP1	YDR328C	MDR1	P53258	950 aa		8	□□□□□ -1.13
SKP1	YDR328C	COG4	Q06096	861 aa		8	□□□□□ -1.13
SKP1	YDR328C	DED1	P06634	604 aa	Known RBP	7.99	□□□□□ -1.13
SKP1	YDR328C	DAL7	P21826	554 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	YSC83	P32792	385 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	TOS3	P43637	560 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	PRY3	P47033	881 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	TOF1	P53840	1238 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	SVF1	Q05515	481 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	COQ9	Q05779	260 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	YAP7	Q08182	245 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	SMC5	Q08204	1093 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	YLL058W	Q12198	575 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	NCR1	Q12200	1170 aa		7.99	□□□□□ -1.13
SKP1	YDR328C	PHO13	P19881	312 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	DBP5	P20449	482 aa	Known RBP	7.98	□□□□□ -1.13
SKP1	YDR328C	CDC48	P25694	835 aa	Known RBP	7.98	□□□□□ -1.13
SKP1	YDR328C	COT1	P32798	439 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	YEL1	P34225	687 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	ATG19	P35193	415 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	SAP190	P36123	1033 aa		7.98	□□□□□ -1.13
SKP1	YDR328C	SHM1	P37292	490 aa	Predicted RBP	7.98	□□□□□ -1.13
SKP1	YDR328C	FLR1	P38124	548 aa		7.98	□□□□□ -1.13

Retrieved 100 of 5,963 RNA–protein pairs in 68 ms