RNA–Protein interactions for RNA: YBR201W

DER1, Transcript of ER membrane protein that promotes export of misfolded polypeptides, yeast

Gene DER1, Length 636 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
DER1	YBR201W	PIC2	P40035	300 aa		4.59	□□□□□ -1.67
DER1	YBR201W	RTR1	P40084	226 aa	Predicted RBP	4.59	□□□□□ -1.67
DER1	YBR201W	NOP2	P40991	618 aa	Known RBP	4.59	□□□□□ -1.67
DER1	YBR201W	MPP10	P47083	593 aa	Known RBP	4.59	□□□□□ -1.67
DER1	YBR201W	OYE2	Q03558	400 aa	Known RBP	4.59	□□□□□ -1.67
DER1	YBR201W	TAP42	Q04372	366 aa		4.59	□□□□□ -1.67
DER1	YBR201W	EST2	Q06163	884 aa		4.59	□□□□□ -1.67
DER1	YBR201W	MCM2	P29469	868 aa		4.58	□□□□□ -1.68
DER1	YBR201W	GRX4	P32642	244 aa		4.58	□□□□□ -1.68
DER1	YBR201W	WHI3	P34761	661 aa	Known RBP	4.58	□□□□□ -1.68
DER1	YBR201W	VPS53	P47061	822 aa		4.58	□□□□□ -1.68
DER1	YBR201W	ENT3	P47160	408 aa		4.58	□□□□□ -1.68
DER1	YBR201W	YNR063W	P53749	607 aa		4.58	□□□□□ -1.68
DER1	YBR201W	CDC45	Q08032	650 aa		4.58	□□□□□ -1.68
DER1	YBR201W	HRK1	Q08732	759 aa	Known RBP	4.58	□□□□□ -1.68
DER1	YBR201W	RET1	P22276	1149 aa	Known RBP	4.57	□□□□□ -1.68
DER1	YBR201W	PUB1	P32588	453 aa	Known RBP RIP-Chip data	4.57	□□□□□ -1.68	not detected
DER1	YBR201W	LIP5	P32875	414 aa		4.57	□□□□□ -1.68
DER1	YBR201W	YKR073C	P36153	106 aa		4.57	□□□□□ -1.68
DER1	YBR201W	VPS27	P40343	622 aa	Known RBP	4.57	□□□□□ -1.68
DER1	YBR201W	INP52	P50942	1183 aa		4.57	□□□□□ -1.68
DER1	YBR201W	PRP43	P53131	767 aa	Known RBP	4.57	□□□□□ -1.68
DER1	YBR201W	SPR28	Q04921	423 aa		4.57	□□□□□ -1.68
DER1	YBR201W	YLR257W	Q06146	321 aa	Known RBP	4.57	□□□□□ -1.68
DER1	YBR201W	ADE6	P38972	1358 aa	Known RBP	4.56	□□□□□ -1.68
DER1	YBR201W	AUS1	Q08409	1394 aa		4.56	□□□□□ -1.68
DER1	YBR201W	RPP0	P05317	312 aa	Known RBP	4.56	□□□□□ -1.68
DER1	YBR201W	RAD27	P26793	382 aa		4.56	□□□□□ -1.68
DER1	YBR201W	PRP45	P28004	379 aa	Predicted RBP	4.56	□□□□□ -1.68
DER1	YBR201W	FYV10	P40492	516 aa		4.56	□□□□□ -1.68
DER1	YBR201W	RRP46	P53256	223 aa	Predicted RBP	4.56	□□□□□ -1.68
DER1	YBR201W	NRD1	P53617	575 aa	Known RBP RIP-Chip data	4.56	□□□□□ -1.68	not detected
DER1	YBR201W	TPP1	Q03796	238 aa		4.56	□□□□□ -1.68
DER1	YBR201W	BRE4	Q07660	1125 aa		4.56	□□□□□ -1.68
DER1	YBR201W	PUS7	Q08647	676 aa	Known RBP	4.56	□□□□□ -1.68
DER1	YBR201W	RVB2	Q12464	471 aa	Known RBP	4.56	□□□□□ -1.68
DER1	YBR201W	SUI2	P20459	304 aa	Known RBP	4.55	□□□□□ -1.68
DER1	YBR201W	QNS1	P38795	714 aa	Known RBP	4.55	□□□□□ -1.68
DER1	YBR201W	SIW14	P53965	281 aa		4.55	□□□□□ -1.68
DER1	YBR201W	IOC4	Q04213	475 aa		4.55	□□□□□ -1.68
DER1	YBR201W	RSA3	Q05942	220 aa	Known RBP	4.55	□□□□□ -1.68
DER1	YBR201W	HDA2	Q06629	674 aa		4.55	□□□□□ -1.68
DER1	YBR201W	MRL1	Q06815	381 aa		4.55	□□□□□ -1.68
DER1	YBR201W	TRE1	Q08919	783 aa		4.55	□□□□□ -1.68
DER1	YBR201W	YVC1	Q12324	675 aa		4.55	□□□□□ -1.68
DER1	YBR201W	SNF2	P22082	1703 aa		4.55	□□□□□ -1.68
DER1	YBR201W	TY4B-H	P0C2J7	1802 aa		4.54	□□□□□ -1.68
DER1	YBR201W	TY4B-J	P47024	1803 aa		4.54	□□□□□ -1.68
DER1	YBR201W	HEM13	P11353	328 aa	Known RBP	4.54	□□□□□ -1.68
DER1	YBR201W	OYE3	P41816	400 aa	Predicted RBP	4.54	□□□□□ -1.68
DER1	YBR201W	MAG2	Q06436	670 aa	Known RBP	4.54	□□□□□ -1.68
DER1	YBR201W	RTT10	Q08924	1013 aa		4.54	□□□□□ -1.68
DER1	YBR201W	TMA46	Q12000	345 aa	Known RBP	4.54	□□□□□ -1.68
DER1	YBR201W	RPO41	P13433	1351 aa	Known RBP	4.53	□□□□□ -1.68
DER1	YBR201W	DED1	P06634	604 aa	Known RBP	4.53	□□□□□ -1.68
DER1	YBR201W	ADP1	P25371	1049 aa		4.53	□□□□□ -1.68
DER1	YBR201W	PRD1	P25375	712 aa		4.53	□□□□□ -1.68
DER1	YBR201W	SNU71	P53207	620 aa	Known RBP	4.53	□□□□□ -1.68
DER1	YBR201W	EAR1	Q03212	550 aa		4.53	□□□□□ -1.68
DER1	YBR201W	SVF1	Q05515	481 aa		4.53	□□□□□ -1.68
DER1	YBR201W	PTC5	Q12511	572 aa		4.53	□□□□□ -1.68
DER1	YBR201W	GCR1	P07261	785 aa		4.52	□□□□□ -1.69
DER1	YBR201W	GCD1	P09032	578 aa	Predicted RBP	4.52	□□□□□ -1.69
DER1	YBR201W	PET112	P33893	541 aa		4.52	□□□□□ -1.69
DER1	YBR201W	MNR2	P35724	969 aa		4.52	□□□□□ -1.69
DER1	YBR201W	AKL1	P38080	1108 aa	Known RBP	4.52	□□□□□ -1.69
DER1	YBR201W	THI22	Q06490	572 aa		4.52	□□□□□ -1.69
DER1	YBR201W	SLM3	Q12093	417 aa		4.52	□□□□□ -1.69
DER1	YBR201W	SRO9	P25567	434 aa	Known RBP	4.51	□□□□□ -1.69
DER1	YBR201W	MKK2	P32491	506 aa		4.51	□□□□□ -1.69
DER1	YBR201W	MDL2	P33311	773 aa		4.51	□□□□□ -1.69
DER1	YBR201W	YHL012W	P38709	493 aa		4.51	□□□□□ -1.69
DER1	YBR201W	FPR3	P38911	411 aa	Known RBP	4.51	□□□□□ -1.69
DER1	YBR201W	CTH1	P47976	325 aa		4.51	□□□□□ -1.69
DER1	YBR201W	DSD1	P53095	428 aa		4.51	□□□□□ -1.69
DER1	YBR201W	RTT109	Q07794	436 aa		4.51	□□□□□ -1.69
DER1	YBR201W	NBA1	Q08229	501 aa	Known RBP	4.51	□□□□□ -1.69
DER1	YBR201W	YPL260W	Q08977	551 aa		4.51	□□□□□ -1.69
DER1	YBR201W	ENT1	Q12518	454 aa		4.51	□□□□□ -1.69
DER1	YBR201W	SYP1	P25623	870 aa	Known RBP	4.5	□□□□□ -1.69
DER1	YBR201W	HSP104	P31539	908 aa	Known RBP	4.5	□□□□□ -1.69
DER1	YBR201W	PRO1	P32264	428 aa		4.5	□□□□□ -1.69
DER1	YBR201W	AFG2	P32794	780 aa		4.5	□□□□□ -1.69
DER1	YBR201W	ALG3	P38179	458 aa		4.5	□□□□□ -1.69
DER1	YBR201W	PEX7	P39108	375 aa		4.5	□□□□□ -1.69
DER1	YBR201W	YJL045W	P47052	634 aa		4.5	□□□□□ -1.69
DER1	YBR201W	YRB30	P53107	440 aa	Predicted RBP	4.5	□□□□□ -1.69
DER1	YBR201W	SDH1	Q00711	640 aa		4.5	□□□□□ -1.69
DER1	YBR201W	ROD1	Q02805	837 aa		4.5	□□□□□ -1.69
DER1	YBR201W	SSY1	Q03770	852 aa		4.5	□□□□□ -1.69
DER1	YBR201W	RRP5	Q05022	1729 aa	Known RBP	4.49	□□□□□ -1.69
DER1	YBR201W	COQ4	O13525	335 aa		4.49	□□□□□ -1.69
DER1	YBR201W	DAL5	P15365	543 aa		4.49	□□□□□ -1.69
DER1	YBR201W	CLN2	P20438	545 aa		4.49	□□□□□ -1.69
DER1	YBR201W	KIP1	P28742	1111 aa		4.49	□□□□□ -1.69
DER1	YBR201W	YSC84	P32793	468 aa		4.49	□□□□□ -1.69
DER1	YBR201W	RGD1	P38339	666 aa		4.49	□□□□□ -1.69
DER1	YBR201W	RRT14	P40470	206 aa		4.49	□□□□□ -1.69
DER1	YBR201W	CNN1	P43618	361 aa		4.49	□□□□□ -1.69
DER1	YBR201W	GNP1	P48813	663 aa		4.49	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 148.2 ms