RNA–Protein interactions for RNA: YBR087W

RFC5, Transcript of Subunit of heteropentameric Replication factor C (RF-C), yeast

Gene RFC5, Length 1,065 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RFC5	YBR087W	RSC58	Q07979	502 aa		4.98	□□□□□ -1.61
RFC5	YBR087W	ACM1	Q08981	209 aa		4.98	□□□□□ -1.61
RFC5	YBR087W	LPX1	Q12405	387 aa	Known RBP	4.98	□□□□□ -1.61
RFC5	YBR087W	THI80	P35202	319 aa		4.97	□□□□□ -1.61
RFC5	YBR087W	UGA2	P38067	497 aa		4.97	□□□□□ -1.61
RFC5	YBR087W	GEM1	P39722	662 aa		4.97	□□□□□ -1.61
RFC5	YBR087W	TAF1	P46677	1066 aa		4.97	□□□□□ -1.61
RFC5	YBR087W	CDC53	Q12018	815 aa	Known RBP	4.97	□□□□□ -1.61
RFC5	YBR087W	SRP40	P32583	406 aa	Predicted RBP	4.96	□□□□□ -1.62
RFC5	YBR087W	IOC3	P43596	787 aa		4.96	□□□□□ -1.62
RFC5	YBR087W	NSE3	Q05541	303 aa		4.96	□□□□□ -1.62
RFC5	YBR087W	OSH2	Q12451	1283 aa		4.96	□□□□□ -1.62
RFC5	YBR087W	GIP4	P39732	760 aa		4.95	□□□□□ -1.62
RFC5	YBR087W	HUL5	P53119	910 aa		4.95	□□□□□ -1.62
RFC5	YBR087W	FMP25	Q08023	583 aa		4.95	□□□□□ -1.62
RFC5	YBR087W	THS1	P04801	734 aa	Known RBP	4.94	□□□□□ -1.62
RFC5	YBR087W	SPS1	P08458	490 aa		4.94	□□□□□ -1.62
RFC5	YBR087W	STI1	P15705	589 aa	Known RBP RIP-Chip data	4.94	□□□□□ -1.62	not detected
RFC5	YBR087W	PRP6	P19735	899 aa	Predicted RBP	4.94	□□□□□ -1.62
RFC5	YBR087W	PRP9	P19736	530 aa	Known RBP	4.94	□□□□□ -1.62
RFC5	YBR087W	RPL8B	P29453	256 aa	Known RBP	4.94	□□□□□ -1.62
RFC5	YBR087W	YKL091C	P33324	310 aa	Known RBP	4.94	□□□□□ -1.62
RFC5	YBR087W	SLA2	P33338	968 aa		4.94	□□□□□ -1.62
RFC5	YBR087W	PFD1	P46988	109 aa		4.94	□□□□□ -1.62
RFC5	YBR087W	YGR125W	P53273	1036 aa		4.94	□□□□□ -1.62
RFC5	YBR087W	DUS3	Q06053	668 aa	Known RBP	4.94	□□□□□ -1.62
RFC5	YBR087W	EAF1	Q06337	982 aa		4.94	□□□□□ -1.62
RFC5	YBR087W	YDR306C	Q06640	478 aa		4.94	□□□□□ -1.62
RFC5	YBR087W	BDF2	Q07442	638 aa		4.94	□□□□□ -1.62
RFC5	YBR087W	YOR131C	Q12486	218 aa		4.94	□□□□□ -1.62
RFC5	YBR087W	YTA7	P40340	1379 aa		4.93	□□□□□ -1.62
RFC5	YBR087W	BI4	P03879	638 aa		4.93	□□□□□ -1.62
RFC5	YBR087W	ARE1	P25628	610 aa		4.93	□□□□□ -1.62
RFC5	YBR087W	ALR2	P43553	858 aa		4.93	□□□□□ -1.62
RFC5	YBR087W	FOL2	P51601	243 aa	Known RBP	4.93	□□□□□ -1.62
RFC5	YBR087W	ERP6	P53198	216 aa		4.93	□□□□□ -1.62
RFC5	YBR087W	HSP60	P19882	572 aa	Known RBP	4.92	□□□□□ -1.62
RFC5	YBR087W	PPH3	P32345	308 aa		4.92	□□□□□ -1.62
RFC5	YBR087W	SAH1	P39954	449 aa	Known RBP	4.92	□□□□□ -1.62
RFC5	YBR087W	TPO2	P53283	614 aa		4.92	□□□□□ -1.62
RFC5	YBR087W	SRP1	Q02821	542 aa	Known RBP	4.92	□□□□□ -1.62
RFC5	YBR087W	UBX5	Q06682	500 aa		4.92	□□□□□ -1.62
RFC5	YBR087W	FLC1	Q08967	793 aa		4.92	□□□□□ -1.62
RFC5	YBR087W	SVS1	Q12254	260 aa		4.92	□□□□□ -1.62
RFC5	YBR087W	YDL177C	Q12257	170 aa		4.92	□□□□□ -1.62
RFC5	YBR087W	AAR2	P32357	355 aa	Predicted RBP	4.91	□□□□□ -1.62
RFC5	YBR087W	FLR1	P38124	548 aa		4.91	□□□□□ -1.62
RFC5	YBR087W	AIM3	P38266	947 aa	Known RBP	4.91	□□□□□ -1.62
RFC5	YBR087W	SEC26	P41810	973 aa	Known RBP	4.91	□□□□□ -1.62
RFC5	YBR087W	GUS1	P46655	708 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
RFC5	YBR087W	UTP8	P53276	713 aa	Known RBP	4.91	□□□□□ -1.62
RFC5	YBR087W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	4.91	□□□□□ -1.62	not detected
RFC5	YBR087W	HRQ1	Q05549	1077 aa		4.91	□□□□□ -1.62
RFC5	YBR087W	CIT1	P00890	479 aa		4.9	□□□□□ -1.63
RFC5	YBR087W	YKL151C	P36059	337 aa		4.9	□□□□□ -1.63
RFC5	YBR087W	RFC5	P38251	354 aa		4.9	□□□□□ -1.63
RFC5	YBR087W	YHR020W	P38708	688 aa	Known RBP	4.9	□□□□□ -1.63
RFC5	YBR087W	CCC2	P38995	1004 aa		4.9	□□□□□ -1.63
RFC5	YBR087W	RRT14	P40470	206 aa		4.9	□□□□□ -1.63
RFC5	YBR087W	MRPL22	P53881	309 aa		4.9	□□□□□ -1.63
RFC5	YBR087W	CDC11	P32458	415 aa		4.89	□□□□□ -1.63
RFC5	YBR087W	CDC12	P32468	407 aa	Known RBP	4.89	□□□□□ -1.63
RFC5	YBR087W	HUL4	P40985	892 aa		4.89	□□□□□ -1.63
RFC5	YBR087W	ORC1	P54784	914 aa	Predicted RBP	4.89	□□□□□ -1.63
RFC5	YBR087W	ATG13	Q06628	738 aa		4.89	□□□□□ -1.63
RFC5	YBR087W	ADE8	P04161	214 aa		4.88	□□□□□ -1.63
RFC5	YBR087W	ACE2	P21192	770 aa		4.88	□□□□□ -1.63
RFC5	YBR087W	APL1	P27351	700 aa		4.88	□□□□□ -1.63
RFC5	YBR087W	HBS1	P32769	611 aa	Known RBP	4.88	□□□□□ -1.63
RFC5	YBR087W	ABZ1	P37254	787 aa	Predicted RBP	4.88	□□□□□ -1.63
RFC5	YBR087W	YRO2	P38079	344 aa		4.88	□□□□□ -1.63
RFC5	YBR087W	YBR284W	P38150	797 aa		4.88	□□□□□ -1.63
RFC5	YBR087W	ETP1	P38748	585 aa	Known RBP	4.88	□□□□□ -1.63
RFC5	YBR087W	RSP5	P39940	809 aa	Known RBP	4.88	□□□□□ -1.63
RFC5	YBR087W	RPN4	Q03465	531 aa		4.88	□□□□□ -1.63
RFC5	YBR087W	RSM24	Q03976	319 aa		4.88	□□□□□ -1.63
RFC5	YBR087W	KIN2	P13186	1147 aa	Known RBP	4.87	□□□□□ -1.63
RFC5	YBR087W	GAL11	P19659	1081 aa		4.87	□□□□□ -1.63
RFC5	YBR087W	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.87	□□□□□ -1.63	not detected
RFC5	YBR087W	GGA2	P38817	585 aa	Known RBP	4.87	□□□□□ -1.63
RFC5	YBR087W	HFM1	P51979	1187 aa		4.87	□□□□□ -1.63
RFC5	YBR087W	MTC3	P53077	123 aa		4.87	□□□□□ -1.63
RFC5	YBR087W	RIM8	P53179	542 aa		4.87	□□□□□ -1.63
RFC5	YBR087W	ENV11	P53246	860 aa		4.87	□□□□□ -1.63
RFC5	YBR087W	FPR4	Q06205	392 aa	Predicted RBP	4.87	□□□□□ -1.63
RFC5	YBR087W	YDL124W	Q07551	312 aa	Known RBP	4.87	□□□□□ -1.63
RFC5	YBR087W	MDM38	Q08179	573 aa		4.87	□□□□□ -1.63
RFC5	YBR087W	YLL058W	Q12198	575 aa		4.87	□□□□□ -1.63
RFC5	YBR087W	SCT1	P32784	759 aa		4.86	□□□□□ -1.63
RFC5	YBR087W	SIT1	P39980	628 aa		4.86	□□□□□ -1.63
RFC5	YBR087W	TAF8	Q03750	510 aa		4.86	□□□□□ -1.63
RFC5	YBR087W	OSW2	Q12202	724 aa		4.86	□□□□□ -1.63
RFC5	YBR087W	YPR071W	Q12346	211 aa		4.86	□□□□□ -1.63
RFC5	YBR087W	HBN1	Q96VH4	193 aa		4.86	□□□□□ -1.63
RFC5	YBR087W	CAN1	P04817	590 aa		4.85	□□□□□ -1.63
RFC5	YBR087W	GIC1	P38785	314 aa		4.85	□□□□□ -1.63
RFC5	YBR087W	CHZ1	P40019	153 aa	Predicted RBP	4.85	□□□□□ -1.63
RFC5	YBR087W	OSW7	P43611	510 aa		4.85	□□□□□ -1.63
RFC5	YBR087W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	4.85	□□□□□ -1.63	not detected
RFC5	YBR087W	SRT1	Q03175	343 aa		4.85	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 113.7 ms