RNA–Protein interactions for RNA: ENSMUST00000165964.7

Lig1-210, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,166 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-210ENSMUST00000165964 Idi1P58044 227 aa14.71□□□□□ -0.06
Lig1-210ENSMUST00000165964 Zfp804bA0A0G2JGH6 1343 aa14.7□□□□□ -0.06
Lig1-210ENSMUST00000165964 Tbc1d31Q6NXY1 996 aa14.7□□□□□ -0.06
Lig1-210ENSMUST00000165964 Nom1Q3UFM5 854 aaKnown RBP14.7□□□□□ -0.06
Lig1-210ENSMUST00000165964 Stx6Q9JKK1 255 aa14.7□□□□□ -0.06
Lig1-210ENSMUST00000165964 Sytl4Q9R0Q1 673 aa14.7□□□□□ -0.06
Lig1-210ENSMUST00000165964 Cct4P80315 539 aaKnown RBP14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Trpm3Q5F4S9 1721 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Cnksr1A2A9K7 700 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Hoxc9P09633 260 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Tlr7P58681 1050 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Zfp51Q3U4L8 781 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 CoilQ5SU73 570 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 DpydQ8CHR6 1025 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Add2Q9QYB8 725 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 N4bp2F8VQG7 1678 aaKnown RBP14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Slc4a10Q5DTL9 1118 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Plppr3Q7TPB0 716 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Samm50Q8BGH2 469 aa14.69□□□□□ -0.06
Lig1-210ENSMUST00000165964 Pik3c2aQ61194 1686 aa14.68□□□□□ -0.06
Lig1-210ENSMUST00000165964 Ubr1O70481 1757 aa14.68□□□□□ -0.06
Lig1-210ENSMUST00000165964 Syt1P46096 421 aa14.68□□□□□ -0.06
Lig1-210ENSMUST00000165964 Ube2hP62257 183 aa14.68□□□□□ -0.06
Lig1-210ENSMUST00000165964 Adcy5P84309 1262 aa14.68□□□□□ -0.06
Lig1-210ENSMUST00000165964 Pcmtd1P59913 357 aa14.68□□□□□ -0.06
Lig1-210ENSMUST00000165964 Rps6ka5Q8C050 863 aa14.68□□□□□ -0.06
Lig1-210ENSMUST00000165964 Ccdc178Q8CDV0 866 aa14.68□□□□□ -0.06
Lig1-210ENSMUST00000165964 Smc3Q9CW03 1217 aaKnown RBP14.68□□□□□ -0.06
Lig1-210ENSMUST00000165964 Col16a1Q8BLX7 1580 aa14.67□□□□□ -0.06
Lig1-210ENSMUST00000165964 Wdr78E9PYY5 807 aa14.67□□□□□ -0.06
Lig1-210ENSMUST00000165964 Zap70P43404 618 aa14.67□□□□□ -0.06
Lig1-210ENSMUST00000165964 Zscan22Q8BGS5 496 aa14.67□□□□□ -0.06
Lig1-210ENSMUST00000165964 Irx6Q9ER75 438 aa14.67□□□□□ -0.06
Lig1-210ENSMUST00000165964 Med4Q9CQA5 270 aa14.67□□□□□ -0.06
Lig1-210ENSMUST00000165964 Mx2Q9WVP9 655 aa14.67□□□□□ -0.06
Lig1-210ENSMUST00000165964 Hvcn1Q3U2S8 269 aa14.67□□□□□ -0.06
Lig1-210ENSMUST00000165964 Brf1Q8CFK2 676 aa14.67□□□□□ -0.06
Lig1-210ENSMUST00000165964 EappQ5BU09 281 aa14.66□□□□□ -0.06
Lig1-210ENSMUST00000165964 Atg3Q9CPX6 314 aa14.66□□□□□ -0.06
Lig1-210ENSMUST00000165964 Bend3Q6PAL0 825 aa14.66□□□□□ -0.06
Lig1-210ENSMUST00000165964 EspnlQ3UYR4 1005 aa14.65□□□□□ -0.06
Lig1-210ENSMUST00000165964 Tmem132eQ6IEE6 982 aa14.65□□□□□ -0.06
Lig1-210ENSMUST00000165964 Rad17Q6NXW6 688 aa14.65□□□□□ -0.06
Lig1-210ENSMUST00000165964 Tti2Q8BGV4 512 aa14.65□□□□□ -0.06
Lig1-210ENSMUST00000165964 Top1mtQ8R4U6 593 aa14.65□□□□□ -0.06
Lig1-210ENSMUST00000165964 SrrtQ99MR6 875 aaKnown RBP14.65□□□□□ -0.06
Lig1-210ENSMUST00000165964 Map2P20357 1828 aa14.65□□□□□ -0.06
Lig1-210ENSMUST00000165964 Myo5bP21271 1818 aa14.65□□□□□ -0.06
Lig1-210ENSMUST00000165964 Ptpn23Q6PB44 1692 aa14.65□□□□□ -0.06
Lig1-210ENSMUST00000165964 Nphp3Q7TNH6 1325 aa14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 Exoc6bA6H5Z3 810 aa14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 Ppfia1B2RXQ2 1266 aa14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 Mcm3P25206 812 aaKnown RBP14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 F2rP30558 430 aa14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 Inpp5bQ8K337 993 aa14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 Abcc10Q8R4P9 1501 aa14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 Cfdp1O88271 295 aaKnown RBP14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 Eif4a1P60843 406 aaKnown RBP14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 Babam1Q3UI43 333 aa14.64□□□□□ -0.07
Lig1-210ENSMUST00000165964 Fyb1O35601 819 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Ncbp1Q3UYV9 790 aaKnown RBP14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Gsdma3Q5Y4Y6 464 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Wdr24Q8CFJ9 790 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Echdc1Q9D9V3 322 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Tceal9Q9DD24 104 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Utp3Q9JI13 469 aaKnown RBP14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Lekr1B2RVN1 116 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Ifit2Q64112 472 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Cfap73J3QPZ5 306 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Map3k13Q1HKZ5 959 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 Usp48Q3V0C5 1052 aa14.63□□□□□ -0.07
Lig1-210ENSMUST00000165964 EzrP26040 586 aaKnown RBP14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Cd22P35329 862 aa14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Tgfb1i1Q62219 461 aa14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Cchcr1Q8K2I2 770 aa14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Cdca7lQ922M5 438 aa14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Q9D9S1 216 aa14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Rreb1Q3UH06 1700 aaKnown RBP14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Fam228bQ497Q6 232 aa14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Taf5lQ91WQ5 589 aa14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Zbtb22Q9Z0G7 638 aa14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Ahnak2E9PYB0 1738 aaKnown RBP14.62□□□□□ -0.07
Lig1-210ENSMUST00000165964 Ptgs1P22437 602 aa14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Arhgef1Q61210 920 aaKnown RBP14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Kcnb2A6H8H5 907 aa14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 1700006A11RikB9EHI3 544 aa14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Cavin1O54724 392 aa14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Kif3aP28741 701 aa14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Grpel1Q99LP6 217 aa14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Mad1l1Q9WTX8 717 aaKnown RBP14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Chd2E9PZM4 1827 aaKnown RBP14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Gm10563F6WIE4 79 aa14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Sgsm2Q80U12 1005 aa14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Mphosph10Q810V0 681 aaKnown RBP14.61□□□□□ -0.07
Lig1-210ENSMUST00000165964 Nup88Q8CEC0 753 aaKnown RBP14.6□□□□□ -0.07
Lig1-210ENSMUST00000165964 Mmel1Q9JLI3 765 aa14.6□□□□□ -0.07
Lig1-210ENSMUST00000165964 Fkbp4P30416 458 aa14.6□□□□□ -0.07
Lig1-210ENSMUST00000165964 Ano8Q6PB70 1060 aa14.6□□□□□ -0.07
Lig1-210ENSMUST00000165964 Amotl1Q9D4H4 968 aa14.6□□□□□ -0.07
Lig1-210ENSMUST00000165964 PtprvP70289 1705 aa14.59□□□□□ -0.07
Retrieved 100 of 22,080 RNA–protein pairs in 1351.1 ms