RNA–Protein interactions for RNA: YNL049C

SFB2, Transcript of Component of the Sec23p-Sfb2p heterodimer of the COPII vesicle coat, yeastyeast

Gene SFB2, Length 2,631 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SFB2YNL049C YPL109CQ02981 657 aa2.27□□□□□ -2.05
SFB2YNL049C SSP2Q08646 371 aa2.27□□□□□ -2.05
SFB2YNL049C FLO1P32768 1537 aa2.27□□□□□ -2.05
SFB2YNL049C PYC2P32327 1180 aaKnown RBP2.26□□□□□ -2.05
SFB2YNL049C YKU70P32807 602 aa2.26□□□□□ -2.05
SFB2YNL049C MAL31P38156 614 aa2.26□□□□□ -2.05
SFB2YNL049C PIC2P40035 300 aa2.26□□□□□ -2.05
SFB2YNL049C MRPS18P42847 217 aa2.26□□□□□ -2.05
SFB2YNL049C VTC4P47075 721 aa2.26□□□□□ -2.05
SFB2YNL049C SKP1P52286 194 aa2.26□□□□□ -2.05
SFB2YNL049C YGR117CP53270 476 aa2.26□□□□□ -2.05
SFB2YNL049C YNR040WP53736 256 aa2.26□□□□□ -2.05
SFB2YNL049C CWC24P53769 259 aa2.26□□□□□ -2.05
SFB2YNL049C ULP1Q02724 621 aa2.26□□□□□ -2.05
SFB2YNL049C SYF1Q04048 859 aaPredicted RBP2.26□□□□□ -2.05
SFB2YNL049C RGP1P16664 663 aa2.26□□□□□ -2.05
SFB2YNL049C DUT1P33317 147 aa2.26□□□□□ -2.05
SFB2YNL049C BRN1P38170 754 aa2.26□□□□□ -2.05
SFB2YNL049C ICP55P40051 511 aa2.26□□□□□ -2.05
SFB2YNL049C YIL165CP40446 119 aa2.26□□□□□ -2.05
SFB2YNL049C FAA4P47912 694 aaKnown RBP2.26□□□□□ -2.05
SFB2YNL049C NUT1P53114 1132 aa2.26□□□□□ -2.05
SFB2YNL049C UBP16Q02863 499 aa2.26□□□□□ -2.05
SFB2YNL049C RMT2Q03305 412 aa2.26□□□□□ -2.05
SFB2YNL049C RBA50Q04418 439 aa2.26□□□□□ -2.05
SFB2YNL049C WRS1Q12109 432 aaKnown RBP2.26□□□□□ -2.05
SFB2YNL049C MCD1Q12158 566 aa2.26□□□□□ -2.05
SFB2YNL049C PUS1Q12211 544 aaKnown RBP2.26□□□□□ -2.05
SFB2YNL049C LPD1P09624 499 aaKnown RBP2.25□□□□□ -2.05
SFB2YNL049C CDC34P14682 295 aa2.25□□□□□ -2.05
SFB2YNL049C SRP40P32583 406 aaPredicted RBP2.25□□□□□ -2.05
SFB2YNL049C SPC42P36094 363 aa2.25□□□□□ -2.05
SFB2YNL049C TAT2P38967 592 aa2.25□□□□□ -2.05
SFB2YNL049C NUP85P46673 744 aa2.25□□□□□ -2.05
SFB2YNL049C RNH70P53331 553 aa2.25□□□□□ -2.05
SFB2YNL049C GDE1Q02979 1223 aa2.25□□□□□ -2.05
SFB2YNL049C ADI1Q03677 179 aa2.25□□□□□ -2.05
SFB2YNL049C MSH6Q03834 1242 aa2.25□□□□□ -2.05
SFB2YNL049C HPF1Q05164 967 aa2.25□□□□□ -2.05
SFB2YNL049C TY3A-GQ12173 290 aa2.25□□□□□ -2.05
SFB2YNL049C TY3A-IQ99219 290 aa2.25□□□□□ -2.05
SFB2YNL049C SAC3P46674 1301 aa2.25□□□□□ -2.05
SFB2YNL049C RPS9AO13516 197 aaKnown RBP2.25□□□□□ -2.05
SFB2YNL049C CIT2P08679 460 aa2.25□□□□□ -2.05
SFB2YNL049C PRI2P20457 528 aa2.25□□□□□ -2.05
SFB2YNL049C YKL091CP33324 310 aaKnown RBP2.25□□□□□ -2.05
SFB2YNL049C MSC7P38694 644 aa2.25□□□□□ -2.05
SFB2YNL049C YBP2P53169 641 aa2.25□□□□□ -2.05
SFB2YNL049C LSC2P53312 427 aa2.25□□□□□ -2.05
SFB2YNL049C YVH1Q02256 364 aaKnown RBP2.25□□□□□ -2.05
SFB2YNL049C NSE3Q05541 303 aa2.25□□□□□ -2.05
SFB2YNL049C BDF2Q07442 638 aa2.25□□□□□ -2.05
SFB2YNL049C DUR1,2P32528 1835 aaKnown RBP2.25□□□□□ -2.05
SFB2YNL049C GCR1P07261 785 aa2.24□□□□□ -2.05
SFB2YNL049C KAR2P16474 682 aaKnown RBP2.24□□□□□ -2.05
SFB2YNL049C YBR287WP38355 427 aa2.24□□□□□ -2.05
SFB2YNL049C APM2P38700 605 aa2.24□□□□□ -2.05
SFB2YNL049C IRC3Q06683 689 aa2.24□□□□□ -2.05
SFB2YNL049C CDC19P00549 500 aaKnown RBP2.24□□□□□ -2.05
SFB2YNL049C RPS24AP0CX31 135 aaKnown RBP2.24□□□□□ -2.05
SFB2YNL049C RPS24BP0CX32 135 aaKnown RBP2.24□□□□□ -2.05
SFB2YNL049C SMY1P32364 656 aaKnown RBP2.24□□□□□ -2.05
SFB2YNL049C YKL069WP36088 180 aa2.24□□□□□ -2.05
SFB2YNL049C MRPL16P38064 232 aa2.24□□□□□ -2.05
SFB2YNL049C ECM2P38241 364 aaKnown RBP2.24□□□□□ -2.05
SFB2YNL049C NMD2P38798 1089 aaKnown RBP2.24□□□□□ -2.05
SFB2YNL049C UBP15P50101 1230 aa2.24□□□□□ -2.05
SFB2YNL049C YGR053CP53234 283 aa2.24□□□□□ -2.05
SFB2YNL049C YAF9P53930 226 aa2.24□□□□□ -2.05
SFB2YNL049C DOS2P54858 310 aa2.24□□□□□ -2.05
SFB2YNL049C CSR2Q12734 1121 aa2.24□□□□□ -2.05
SFB2YNL049C THS1P04801 734 aaKnown RBP2.23□□□□□ -2.05
SFB2YNL049C POL3P15436 1097 aa2.23□□□□□ -2.05
SFB2YNL049C RIM11P38615 370 aa2.23□□□□□ -2.05
SFB2YNL049C RVS167P39743 482 aaKnown RBP2.23□□□□□ -2.05
SFB2YNL049C YJL049WP47048 450 aa2.23□□□□□ -2.05
SFB2YNL049C YJR008WP47085 338 aa2.23□□□□□ -2.05
SFB2YNL049C ECM16Q04217 1267 aaKnown RBP2.23□□□□□ -2.05
SFB2YNL049C YLR225CQ05948 407 aaKnown RBP2.23□□□□□ -2.05
SFB2YNL049C OPI10Q08202 246 aa2.23□□□□□ -2.05
SFB2YNL049C CDC53Q12018 815 aaKnown RBP2.23□□□□□ -2.05
SFB2YNL049C ICL2Q12031 575 aa2.23□□□□□ -2.05
SFB2YNL049C CMR1Q12510 522 aaKnown RBP2.23□□□□□ -2.05
SFB2YNL049C HEM13P11353 328 aaKnown RBP2.23□□□□□ -2.05
SFB2YNL049C IDI1P15496 288 aa2.23□□□□□ -2.05
SFB2YNL049C PBP2P38151 413 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
SFB2YNL049C BUD6P41697 788 aa2.23□□□□□ -2.05
SFB2YNL049C GNP1P48813 663 aa2.23□□□□□ -2.05
SFB2YNL049C PPT1P53043 513 aa2.23□□□□□ -2.05
SFB2YNL049C EEB1Q02891 456 aa2.23□□□□□ -2.05
SFB2YNL049C RPN4Q03465 531 aa2.23□□□□□ -2.05
SFB2YNL049C RIX7Q07844 837 aaKnown RBP2.23□□□□□ -2.05
SFB2YNL049C STI1P15705 589 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
SFB2YNL049C NPR1P22211 790 aa2.22□□□□□ -2.05
SFB2YNL049C KCC4P25389 1037 aa2.22□□□□□ -2.05
SFB2YNL049C PPG1P32838 368 aa2.22□□□□□ -2.05
SFB2YNL049C TIM23P32897 222 aa2.22□□□□□ -2.05
SFB2YNL049C PEX28P38848 579 aa2.22□□□□□ -2.05
SFB2YNL049C SPF1P39986 1215 aaKnown RBP2.22□□□□□ -2.05
SFB2YNL049C NET1P47035 1189 aa2.22□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 7 ms