RNA–Protein interactions for RNA: YMR004W

MVP1, Transcript of Protein required for sorting proteins to the vacuole, yeast

Gene MVP1, Length 1,536 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MVP1	YMR004W	CMP2	P14747	604 aa		3.18	□□□□□ -1.9
MVP1	YMR004W	SNF5	P18480	905 aa		3.18	□□□□□ -1.9
MVP1	YMR004W	UGA4	P32837	571 aa		3.18	□□□□□ -1.9
MVP1	YMR004W	SQT1	P35184	431 aa		3.18	□□□□□ -1.9
MVP1	YMR004W	PEX28	P38848	579 aa		3.18	□□□□□ -1.9
MVP1	YMR004W	GPB2	P39717	880 aa		3.18	□□□□□ -1.9
MVP1	YMR004W	FRT1	Q99332	602 aa		3.18	□□□□□ -1.9
MVP1	YMR004W	AFG2	P32794	780 aa		3.17	□□□□□ -1.9
MVP1	YMR004W	PRP40	P33203	583 aa	Known RBP	3.17	□□□□□ -1.9
MVP1	YMR004W	PBP1	P53297	722 aa	Known RBP	3.17	□□□□□ -1.9
MVP1	YMR004W	KAR2	P16474	682 aa	Known RBP	3.16	□□□□□ -1.9
MVP1	YMR004W	GCD6	P32501	712 aa	Known RBP	3.16	□□□□□ -1.9
MVP1	YMR004W	RFC5	P38251	354 aa		3.16	□□□□□ -1.9
MVP1	YMR004W	RPN3	P40016	523 aa	Known RBP	3.16	□□□□□ -1.9
MVP1	YMR004W	VPS62	P53285	467 aa		3.16	□□□□□ -1.9
MVP1	YMR004W	KIN4	Q01919	800 aa		3.16	□□□□□ -1.9
MVP1	YMR004W	ULP1	Q02724	621 aa		3.16	□□□□□ -1.9
MVP1	YMR004W	HEM13	P11353	328 aa	Known RBP	3.15	□□□□□ -1.9
MVP1	YMR004W	DCG1	P32460	244 aa		3.15	□□□□□ -1.9
MVP1	YMR004W	VPS35	P34110	944 aa		3.15	□□□□□ -1.9
MVP1	YMR004W	DEF1	P35732	738 aa	Known RBP	3.15	□□□□□ -1.9
MVP1	YMR004W	YGL140C	P53120	1219 aa		3.15	□□□□□ -1.9
MVP1	YMR004W	YAP6	Q03935	383 aa		3.15	□□□□□ -1.9
MVP1	YMR004W	YLR224W	Q05947	369 aa		3.15	□□□□□ -1.9
MVP1	YMR004W	RIB2	Q12362	591 aa	Known RBP	3.15	□□□□□ -1.9
MVP1	YMR004W	PTC5	Q12511	572 aa		3.15	□□□□□ -1.9
MVP1	YMR004W	YHL050C	P38721	697 aa		3.14	□□□□□ -1.91
MVP1	YMR004W	YHR219W	P38900	624 aa		3.14	□□□□□ -1.91
MVP1	YMR004W	MSS4	P38994	779 aa		3.14	□□□□□ -1.91
MVP1	YMR004W	EST2	Q06163	884 aa		3.14	□□□□□ -1.91
MVP1	YMR004W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.14	□□□□□ -1.91	not detected
MVP1	YMR004W	OXR1	Q08952	273 aa		3.14	□□□□□ -1.91
MVP1	YMR004W	KIN2	P13186	1147 aa	Known RBP	3.13	□□□□□ -1.91
MVP1	YMR004W	ALG3	P38179	458 aa		3.13	□□□□□ -1.91
MVP1	YMR004W	DAL4	Q04895	635 aa		3.13	□□□□□ -1.91
MVP1	YMR004W	PPM2	Q08282	695 aa		3.13	□□□□□ -1.91
MVP1	YMR004W	YPL260W	Q08977	551 aa		3.13	□□□□□ -1.91
MVP1	YMR004W	HMI1	Q12039	706 aa		3.13	□□□□□ -1.91
MVP1	YMR004W	SEC23	P15303	768 aa	Known RBP	3.12	□□□□□ -1.91
MVP1	YMR004W	EMC1	P25574	760 aa		3.12	□□□□□ -1.91
MVP1	YMR004W	GTF1	P53260	183 aa	Predicted RBP	3.12	□□□□□ -1.91
MVP1	YMR004W	SIZ1	Q04195	904 aa		3.12	□□□□□ -1.91
MVP1	YMR004W	PHO4	P07270	312 aa	Known RBP	3.11	□□□□□ -1.91
MVP1	YMR004W	OAR1	P35731	278 aa		3.11	□□□□□ -1.91
MVP1	YMR004W	PPX1	P38698	397 aa		3.11	□□□□□ -1.91
MVP1	YMR004W	STM1	P39015	273 aa	Known RBP	3.11	□□□□□ -1.91
MVP1	YMR004W	DAK2	P43550	591 aa		3.11	□□□□□ -1.91
MVP1	YMR004W	NOP12	Q08208	459 aa	Known RBP	3.11	□□□□□ -1.91
MVP1	YMR004W	APL1	P27351	700 aa		3.1	□□□□□ -1.91
MVP1	YMR004W	MOH1	P38191	138 aa		3.1	□□□□□ -1.91
MVP1	YMR004W	YFL054C	P43549	646 aa		3.1	□□□□□ -1.91
MVP1	YMR004W	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.1	□□□□□ -1.91	not detected
MVP1	YMR004W	ADI1	Q03677	179 aa		3.1	□□□□□ -1.91
MVP1	YMR004W	SVS1	Q12254	260 aa		3.1	□□□□□ -1.91
MVP1	YMR004W	SSF1	P38789	453 aa	Predicted RBP	3.09	□□□□□ -1.91
MVP1	YMR004W	SIP5	P40210	489 aa	Known RBP	3.09	□□□□□ -1.91
MVP1	YMR004W	GCV2	P49095	1034 aa		3.09	□□□□□ -1.91
MVP1	YMR004W	YPL109C	Q02981	657 aa		3.09	□□□□□ -1.91
MVP1	YMR004W	DED1	P06634	604 aa	Known RBP	3.09	□□□□□ -1.92
MVP1	YMR004W	PLB1	P39105	664 aa		3.09	□□□□□ -1.92
MVP1	YMR004W	THI12	P42883	340 aa		3.09	□□□□□ -1.92
MVP1	YMR004W	THI5	P43534	340 aa		3.09	□□□□□ -1.92
MVP1	YMR004W	THI11	P47183	340 aa		3.09	□□□□□ -1.92
MVP1	YMR004W	THI13	Q07748	340 aa		3.09	□□□□□ -1.92
MVP1	YMR004W	MET4	P32389	672 aa		3.08	□□□□□ -1.92
MVP1	YMR004W	UBA2	P52488	636 aa		3.08	□□□□□ -1.92
MVP1	YMR004W	MSC2	Q03455	724 aa		3.08	□□□□□ -1.92
MVP1	YMR004W	TAF7	Q05021	590 aa		3.08	□□□□□ -1.92
MVP1	YMR004W	TOS4	Q06266	489 aa		3.08	□□□□□ -1.92
MVP1	YMR004W	MSC6	Q08818	692 aa	Known RBP	3.08	□□□□□ -1.92
MVP1	YMR004W	TAF13	P11747	167 aa		3.07	□□□□□ -1.92
MVP1	YMR004W	SNM1	P40993	198 aa		3.07	□□□□□ -1.92
MVP1	YMR004W	IOC3	P43596	787 aa		3.07	□□□□□ -1.92
MVP1	YMR004W	ATG13	Q06628	738 aa		3.07	□□□□□ -1.92
MVP1	YMR004W	SEC20	P28791	383 aa		3.06	□□□□□ -1.92
MVP1	YMR004W	HRR25	P29295	494 aa	Known RBP	3.06	□□□□□ -1.92
MVP1	YMR004W	SLD2	P34252	453 aa		3.06	□□□□□ -1.92
MVP1	YMR004W	RAT1	Q02792	1006 aa	Known RBP	3.06	□□□□□ -1.92
MVP1	YMR004W	HXK1	P04806	485 aa	Known RBP	3.05	□□□□□ -1.92
MVP1	YMR004W	RPT1	P33299	467 aa	Known RBP	3.05	□□□□□ -1.92
MVP1	YMR004W	FAA3	P39002	694 aa		3.05	□□□□□ -1.92
MVP1	YMR004W	PIC2	P40035	300 aa		3.05	□□□□□ -1.92
MVP1	YMR004W	ATF1	P40353	525 aa		3.05	□□□□□ -1.92
MVP1	YMR004W	EXG2	P52911	562 aa		3.05	□□□□□ -1.92
MVP1	YMR004W	BDF2	Q07442	638 aa		3.05	□□□□□ -1.92
MVP1	YMR004W	AIM39	Q08223	395 aa		3.05	□□□□□ -1.92
MVP1	YMR004W	WHI5	Q12416	295 aa		3.05	□□□□□ -1.92
MVP1	YMR004W	YER152C	P10356	443 aa		3.04	□□□□□ -1.92
MVP1	YMR004W	PFK1	P16861	987 aa	Known RBP	3.04	□□□□□ -1.92
MVP1	YMR004W	PEP7	P32609	515 aa		3.04	□□□□□ -1.92
MVP1	YMR004W	RGD1	P38339	666 aa		3.04	□□□□□ -1.92
MVP1	YMR004W	MND2	P40577	368 aa		3.04	□□□□□ -1.92
MVP1	YMR004W	MET12	P46151	657 aa		3.04	□□□□□ -1.92
MVP1	YMR004W	TPO1	Q07824	586 aa		3.04	□□□□□ -1.92
MVP1	YMR004W	MCD1	Q12158	566 aa		3.04	□□□□□ -1.92
MVP1	YMR004W	PRE9	P23638	258 aa	Known RBP	3.03	□□□□□ -1.92
MVP1	YMR004W	MRPS18	P42847	217 aa		3.03	□□□□□ -1.92
MVP1	YMR004W	ROD1	Q02805	837 aa		3.03	□□□□□ -1.92
MVP1	YMR004W	ADY3	Q07732	790 aa		3.03	□□□□□ -1.92
MVP1	YMR004W	HIS5	P07172	385 aa		3.03	□□□□□ -1.92

Retrieved 100 of 5,963 RNA–protein pairs in 7.3 ms