RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C FZO1P38297 855 aa13.35□□□□□ -0.27
BDF1YLR399C CCM1P48237 864 aaPredicted RBP13.35□□□□□ -0.27
BDF1YLR399C HDA1P53973 706 aa13.35□□□□□ -0.27
BDF1YLR399C NOB1Q08444 459 aaKnown RBP13.35□□□□□ -0.27
BDF1YLR399C HXT1P32465 570 aa13.34□□□□□ -0.27
BDF1YLR399C HIR1P32479 840 aa13.34□□□□□ -0.27
BDF1YLR399C KIC1P38692 1080 aa13.34□□□□□ -0.27
BDF1YLR399C PIH1P38768 344 aa13.34□□□□□ -0.27
BDF1YLR399C REV7P38927 245 aa13.34□□□□□ -0.27
BDF1YLR399C ERP6P53198 216 aa13.34□□□□□ -0.27
BDF1YLR399C USA1Q03714 838 aa13.34□□□□□ -0.27
BDF1YLR399C PPM2Q08282 695 aa13.34□□□□□ -0.27
BDF1YLR399C GNT1Q12096 491 aa13.34□□□□□ -0.27
BDF1YLR399C YNL320WP42840 284 aa13.33□□□□□ -0.27
BDF1YLR399C YNL144CP53907 740 aa13.33□□□□□ -0.27
BDF1YLR399C RMT2Q03305 412 aa13.33□□□□□ -0.27
BDF1YLR399C ORM2Q06144 216 aa13.33□□□□□ -0.27
BDF1YLR399C YAP7Q08182 245 aa13.33□□□□□ -0.27
BDF1YLR399C ABP140Q08641 628 aaKnown RBP13.33□□□□□ -0.27
BDF1YLR399C PRP45P28004 379 aaPredicted RBP13.33□□□□□ -0.28
BDF1YLR399C SIT1P39980 628 aa13.33□□□□□ -0.28
BDF1YLR399C SNU71P53207 620 aaKnown RBP13.33□□□□□ -0.28
BDF1YLR399C TRS120Q04183 1289 aa13.33□□□□□ -0.28
BDF1YLR399C RRI2Q12348 645 aa13.33□□□□□ -0.28
BDF1YLR399C CDC11P32458 415 aa13.32□□□□□ -0.28
BDF1YLR399C STE20Q03497 939 aaKnown RBP13.32□□□□□ -0.28
BDF1YLR399C TAF10Q12030 206 aa13.32□□□□□ -0.28
BDF1YLR399C RTS1P38903 757 aa13.32□□□□□ -0.28
BDF1YLR399C PTK2P47116 818 aaKnown RBP13.32□□□□□ -0.28
BDF1YLR399C PCL10P53124 433 aa13.32□□□□□ -0.28
BDF1YLR399C KAR5Q04746 504 aa13.32□□□□□ -0.28
BDF1YLR399C SPO75Q07798 868 aa13.32□□□□□ -0.28
BDF1YLR399C ALR1Q08269 859 aa13.32□□□□□ -0.28
BDF1YLR399C YCR051WP25631 222 aa13.31□□□□□ -0.28
BDF1YLR399C STE13P33894 931 aa13.31□□□□□ -0.28
BDF1YLR399C SET5P38890 526 aaKnown RBP13.31□□□□□ -0.28
BDF1YLR399C IAH1P41734 238 aa13.31□□□□□ -0.28
BDF1YLR399C DAS1P47005 663 aa13.31□□□□□ -0.28
BDF1YLR399C YJR039WP47107 1121 aa13.31□□□□□ -0.28
BDF1YLR399C SUB1P54000 292 aaKnown RBP13.31□□□□□ -0.28
BDF1YLR399C OSW1Q08692 278 aa13.31□□□□□ -0.28
BDF1YLR399C SSA2P10592 639 aaKnown RBP13.3□□□□□ -0.28
BDF1YLR399C MCD4P36051 919 aa13.3□□□□□ -0.28
BDF1YLR399C RSA3Q05942 220 aaKnown RBP13.3□□□□□ -0.28
BDF1YLR399C YVC1Q12324 675 aa13.3□□□□□ -0.28
BDF1YLR399C ZRT2Q12436 422 aa13.3□□□□□ -0.28
BDF1YLR399C YMR085WP0CF18 432 aa13.3□□□□□ -0.28
BDF1YLR399C ARG8P18544 423 aa13.3□□□□□ -0.28
BDF1YLR399C UBC6P33296 250 aaPredicted RBP13.3□□□□□ -0.28
BDF1YLR399C UGA2P38067 497 aa13.3□□□□□ -0.28
BDF1YLR399C KAP123P40069 1113 aaKnown RBP13.3□□□□□ -0.28
BDF1YLR399C INA22P40576 216 aa13.3□□□□□ -0.28
BDF1YLR399C AXL1P40851 1208 aa13.3□□□□□ -0.28
BDF1YLR399C MDJ2P42834 146 aa13.3□□□□□ -0.28
BDF1YLR399C GIR2Q03768 265 aaPredicted RBP13.3□□□□□ -0.28
BDF1YLR399C TFC6Q06339 672 aa13.3□□□□□ -0.28
BDF1YLR399C OPY2Q06810 360 aa13.3□□□□□ -0.28
BDF1YLR399C SIL1Q08199 421 aa13.3□□□□□ -0.28
BDF1YLR399C FAS2P19097 1887 aaKnown RBP13.3□□□□□ -0.28
BDF1YLR399C CHO2P05374 869 aaKnown RBP13.29□□□□□ -0.28
BDF1YLR399C APL1P27351 700 aa13.29□□□□□ -0.28
BDF1YLR399C PCI8P40512 444 aa13.29□□□□□ -0.28
BDF1YLR399C UBP6P43593 499 aaKnown RBP13.29□□□□□ -0.28
BDF1YLR399C SSP2Q08646 371 aa13.29□□□□□ -0.28
BDF1YLR399C YPL216WQ08964 1102 aa13.29□□□□□ -0.28
BDF1YLR399C DAS2Q12084 232 aa13.29□□□□□ -0.28
BDF1YLR399C DCD1P06773 312 aa13.28□□□□□ -0.28
BDF1YLR399C COQ1P18900 473 aa13.28□□□□□ -0.28
BDF1YLR399C MVD1P32377 396 aaKnown RBP13.28□□□□□ -0.28
BDF1YLR399C ECM4P36156 370 aa13.28□□□□□ -0.28
BDF1YLR399C ERG7P38604 731 aa13.28□□□□□ -0.28
BDF1YLR399C TIF4631P39935 952 aaKnown RBP13.28□□□□□ -0.28
BDF1YLR399C VPS16Q03308 798 aa13.28□□□□□ -0.28
BDF1YLR399C SCJ1P25303 377 aa13.28□□□□□ -0.28
BDF1YLR399C OXP1P28273 1286 aa13.28□□□□□ -0.28
BDF1YLR399C RXT2P38255 430 aa13.28□□□□□ -0.28
BDF1YLR399C GVP36P40531 326 aaKnown RBP13.28□□□□□ -0.28
BDF1YLR399C URB2P47108 1174 aa13.28□□□□□ -0.28
BDF1YLR399C YBP2P53169 641 aa13.28□□□□□ -0.28
BDF1YLR399C BTN2P53286 410 aa13.28□□□□□ -0.28
BDF1YLR399C BDF2Q07442 638 aa13.28□□□□□ -0.28
BDF1YLR399C TCB1Q12466 1186 aa13.28□□□□□ -0.28
BDF1YLR399C BAS1P22035 811 aa13.27□□□□□ -0.28
BDF1YLR399C NUF2P33895 451 aa13.27□□□□□ -0.28
BDF1YLR399C HAL5P38970 855 aaKnown RBP13.27□□□□□ -0.28
BDF1YLR399C YOR296WQ08748 1289 aa13.27□□□□□ -0.28
BDF1YLR399C RPB2P08518 1224 aaKnown RBP13.27□□□□□ -0.29
BDF1YLR399C ILV6P25605 309 aaKnown RBP13.27□□□□□ -0.29
BDF1YLR399C SEC66P33754 206 aa13.27□□□□□ -0.29
BDF1YLR399C SMC2P38989 1170 aaKnown RBP13.27□□□□□ -0.29
BDF1YLR399C MPH1P40562 993 aa13.27□□□□□ -0.29
BDF1YLR399C NCA2Q12374 616 aa13.27□□□□□ -0.29
BDF1YLR399C OCA6Q12454 224 aa13.27□□□□□ -0.29
BDF1YLR399C TUP1P16649 713 aa13.26□□□□□ -0.29
BDF1YLR399C ASF1P32447 279 aa13.26□□□□□ -0.29
BDF1YLR399C NIP1P32497 812 aaKnown RBP13.26□□□□□ -0.29
BDF1YLR399C RRP8P38961 392 aaKnown RBP13.26□□□□□ -0.29
BDF1YLR399C SMX2P40204 77 aaKnown RBP13.26□□□□□ -0.29
BDF1YLR399C TDA10P42938 290 aa13.26□□□□□ -0.29
BDF1YLR399C DIG1Q03063 452 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 5,963 RNA–protein pairs in 289.4 ms