RNA–Protein interactions for RNA: YLR247C

IRC20, Transcript of E3 ubiquitin ligase and putative helicase, yeastyeast

Gene IRC20, Length 4,671 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
IRC20YLR247C MCD4P36051 919 aa2.09□□□□□ -2.08
IRC20YLR247C KTR4P38131 464 aa2.09□□□□□ -2.08
IRC20YLR247C TOM71P38825 639 aaKnown RBP2.09□□□□□ -2.08
IRC20YLR247C UBP12P39538 1254 aa2.09□□□□□ -2.08
IRC20YLR247C DAK1P54838 584 aaKnown RBP2.09□□□□□ -2.08
IRC20YLR247C CDC48P25694 835 aaKnown RBP2.08□□□□□ -2.08
IRC20YLR247C SKP2P42843 763 aa2.08□□□□□ -2.08
IRC20YLR247C YML037CQ03703 340 aa2.08□□□□□ -2.08
IRC20YLR247C GYL1Q04322 720 aa2.08□□□□□ -2.08
IRC20YLR247C MMR1Q06324 491 aa2.08□□□□□ -2.08
IRC20YLR247C SPN1Q06505 410 aaPredicted RBP2.08□□□□□ -2.08
IRC20YLR247C APL5Q08951 932 aaKnown RBP2.08□□□□□ -2.08
IRC20YLR247C ERP3Q12403 225 aa2.08□□□□□ -2.08
IRC20YLR247C NOP56Q12460 504 aaKnown RBP RIP-Chip data2.08□□□□□ -2.08not detected
IRC20YLR247C SEC8P32855 1065 aa2.08□□□□□ -2.08
IRC20YLR247C YAP1801P38856 637 aa2.08□□□□□ -2.08
IRC20YLR247C ISM1P48526 1002 aa2.08□□□□□ -2.08
IRC20YLR247C SCS3P53012 380 aa2.08□□□□□ -2.08
IRC20YLR247C KXD1P53158 218 aa2.08□□□□□ -2.08
IRC20YLR247C ENV11P53246 860 aa2.08□□□□□ -2.08
IRC20YLR247C HST3P53687 447 aa2.08□□□□□ -2.08
IRC20YLR247C SFB2P53953 876 aa2.08□□□□□ -2.08
IRC20YLR247C DUS4Q06063 367 aa2.08□□□□□ -2.08
IRC20YLR247C SPH1Q06160 661 aa2.08□□□□□ -2.08
IRC20YLR247C RAS1P01119 309 aa2.08□□□□□ -2.08
IRC20YLR247C FUB1P25659 250 aa2.08□□□□□ -2.08
IRC20YLR247C RDH54P38086 958 aa2.08□□□□□ -2.08
IRC20YLR247C CST26P38226 397 aa2.08□□□□□ -2.08
IRC20YLR247C YFL052WP43551 465 aa2.08□□□□□ -2.08
IRC20YLR247C DOS2P54858 310 aa2.08□□□□□ -2.08
IRC20YLR247C DAL5P15365 543 aa2.08□□□□□ -2.08
IRC20YLR247C VMA2P16140 517 aaKnown RBP2.08□□□□□ -2.08
IRC20YLR247C PET123P17558 318 aa2.08□□□□□ -2.08
IRC20YLR247C RPN2P32565 945 aaKnown RBP2.08□□□□□ -2.08
IRC20YLR247C PAP2P53632 584 aaKnown RBP2.08□□□□□ -2.08
IRC20YLR247C SSL1Q04673 461 aaPredicted RBP2.08□□□□□ -2.08
IRC20YLR247C TOR1P35169 2470 aa2.07□□□□□ -2.08
IRC20YLR247C KIN82P25341 720 aa2.07□□□□□ -2.08
IRC20YLR247C BRE2P43132 505 aa2.07□□□□□ -2.08
IRC20YLR247C SPO74P45819 413 aa2.07□□□□□ -2.08
IRC20YLR247C BMS1Q08965 1183 aaKnown RBP2.07□□□□□ -2.08
IRC20YLR247C MSB2P32334 1306 aa2.07□□□□□ -2.08
IRC20YLR247C HIS4P00815 799 aaKnown RBP2.07□□□□□ -2.08
IRC20YLR247C CAN1P04817 590 aa2.07□□□□□ -2.08
IRC20YLR247C MAK16P10962 306 aaPredicted RBP2.07□□□□□ -2.08
IRC20YLR247C FUN30P31380 1131 aa2.07□□□□□ -2.08
IRC20YLR247C PEP7P32609 515 aa2.07□□□□□ -2.08
IRC20YLR247C NGR1P32831 672 aaKnown RBP2.07□□□□□ -2.08
IRC20YLR247C SQT1P35184 431 aa2.07□□□□□ -2.08
IRC20YLR247C LEO1P38439 464 aa2.07□□□□□ -2.08
IRC20YLR247C APE4P38821 490 aa2.07□□□□□ -2.08
IRC20YLR247C TVP23P38962 199 aa2.07□□□□□ -2.08
IRC20YLR247C MDM1Q01846 1127 aa2.07□□□□□ -2.08
IRC20YLR247C KAR5Q04746 504 aa2.07□□□□□ -2.08
IRC20YLR247C SPE3Q12074 293 aaKnown RBP2.07□□□□□ -2.08
IRC20YLR247C TAO3P40468 2376 aa2.07□□□□□ -2.08
IRC20YLR247C AFT1P22149 690 aa2.07□□□□□ -2.08
IRC20YLR247C ISF1P32488 338 aa2.07□□□□□ -2.08
IRC20YLR247C DUR3P33413 735 aa2.07□□□□□ -2.08
IRC20YLR247C BFR1P38934 470 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
IRC20YLR247C GYP7P48365 746 aa2.07□□□□□ -2.08
IRC20YLR247C SGO1Q08490 590 aa2.07□□□□□ -2.08
IRC20YLR247C OSH2Q12451 1283 aa2.07□□□□□ -2.08
IRC20YLR247C TRA1P38811 3744 aa2.07□□□□□ -2.08
IRC20YLR247C SWI6P09959 803 aa2.06□□□□□ -2.08
IRC20YLR247C PEP5P12868 1029 aa2.06□□□□□ -2.08
IRC20YLR247C PRE8P23639 250 aa2.06□□□□□ -2.08
IRC20YLR247C SMC3P47037 1230 aa2.06□□□□□ -2.08
IRC20YLR247C SRC1Q03707 834 aa2.06□□□□□ -2.08
IRC20YLR247C THI22Q06490 572 aa2.06□□□□□ -2.08
IRC20YLR247C TRM11Q12463 433 aa2.06□□□□□ -2.08
IRC20YLR247C ACE2P21192 770 aa2.06□□□□□ -2.08
IRC20YLR247C SRM1P21827 482 aa2.06□□□□□ -2.08
IRC20YLR247C CBF5P33322 483 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
IRC20YLR247C GUA1P38625 525 aaKnown RBP2.06□□□□□ -2.08
IRC20YLR247C STM1P39015 273 aaKnown RBP2.06□□□□□ -2.08
IRC20YLR247C MVP1P40959 511 aaKnown RBP2.06□□□□□ -2.08
IRC20YLR247C ASI3P53983 676 aa2.06□□□□□ -2.08
IRC20YLR247C YML108WQ03759 105 aa2.06□□□□□ -2.08
IRC20YLR247C BUD20Q08004 166 aaPredicted RBP2.06□□□□□ -2.08
IRC20YLR247C RUD3Q12234 484 aaKnown RBP2.06□□□□□ -2.08
IRC20YLR247C DYN1P36022 4092 aa2.06□□□□□ -2.08
IRC20YLR247C PDC1P06169 563 aaKnown RBP2.06□□□□□ -2.08
IRC20YLR247C CLB1P24868 471 aa2.06□□□□□ -2.08
IRC20YLR247C HCM1P25364 564 aa2.06□□□□□ -2.08
IRC20YLR247C KIP2P28743 706 aa2.06□□□□□ -2.08
IRC20YLR247C ZIP1P31111 875 aa2.06□□□□□ -2.08
IRC20YLR247C ENT3P47160 408 aa2.06□□□□□ -2.08
IRC20YLR247C YDR090CQ03193 310 aa2.06□□□□□ -2.08
IRC20YLR247C UTP14Q04500 899 aaKnown RBP2.06□□□□□ -2.08
IRC20YLR247C RPP0P05317 312 aaKnown RBP2.06□□□□□ -2.08
IRC20YLR247C SPT2P06843 333 aaPredicted RBP2.06□□□□□ -2.08
IRC20YLR247C RAD2P07276 1031 aa2.06□□□□□ -2.08
IRC20YLR247C MRP7P12687 371 aa2.06□□□□□ -2.08
IRC20YLR247C MSD1P15179 658 aaKnown RBP2.06□□□□□ -2.08
IRC20YLR247C UTR4P32626 227 aa2.06□□□□□ -2.08
IRC20YLR247C SMC2P38989 1170 aaKnown RBP2.06□□□□□ -2.08
IRC20YLR247C BOI2P39969 1040 aa2.06□□□□□ -2.08
IRC20YLR247C SRT1Q03175 343 aa2.06□□□□□ -2.08
IRC20YLR247C YPR015CQ12531 247 aa2.06□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 63.6 ms