RNA–Protein interactions for RNA: YLR055C

SPT8, Transcript of Subunit of the SAGA transcriptional regulatory complex, yeastyeast

Gene SPT8, Length 1,809 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT8YLR055C SAP1P39955 897 aaKnown RBP12.21□□□□□ -0.46
SPT8YLR055C FYV8P46949 817 aaKnown RBP12.21□□□□□ -0.46
SPT8YLR055C OMS1Q06668 471 aa12.21□□□□□ -0.46
SPT8YLR055C RPS6AP0CX37 236 aaKnown RBP12.2□□□□□ -0.46
SPT8YLR055C RPS6BP0CX38 236 aaPredicted RBP12.2□□□□□ -0.46
SPT8YLR055C EFM2P38347 419 aa12.2□□□□□ -0.46
SPT8YLR055C TFC6Q06339 672 aa12.2□□□□□ -0.46
SPT8YLR055C AVT3P36062 692 aa12.19□□□□□ -0.46
SPT8YLR055C MMR1Q06324 491 aa12.19□□□□□ -0.46
SPT8YLR055C HMI1Q12039 706 aa12.19□□□□□ -0.46
SPT8YLR055C MAK31P23059 88 aa12.18□□□□□ -0.46
SPT8YLR055C MCM3P24279 971 aaKnown RBP12.18□□□□□ -0.46
SPT8YLR055C MUD2P36084 527 aaKnown RBP12.18□□□□□ -0.46
SPT8YLR055C MCX1P38323 520 aaPredicted RBP12.18□□□□□ -0.46
SPT8YLR055C BSD2P38356 321 aa12.18□□□□□ -0.46
SPT8YLR055C CTM1P38818 585 aa12.18□□□□□ -0.46
SPT8YLR055C BUD16P39988 312 aa12.18□□□□□ -0.46
SPT8YLR055C ERG5P54781 538 aa12.18□□□□□ -0.46
SPT8YLR055C VAC14Q06708 880 aa12.18□□□□□ -0.46
SPT8YLR055C OSH2Q12451 1283 aa12.18□□□□□ -0.46
SPT8YLR055C PTC5Q12511 572 aa12.18□□□□□ -0.46
SPT8YLR055C KRS1P15180 591 aaKnown RBP12.18□□□□□ -0.46
SPT8YLR055C RIX1P38883 763 aaPredicted RBP12.18□□□□□ -0.46
SPT8YLR055C ATG3P40344 310 aa12.18□□□□□ -0.46
SPT8YLR055C HUL4P40985 892 aa12.18□□□□□ -0.46
SPT8YLR055C YGR237CP50089 785 aa12.18□□□□□ -0.46
SPT8YLR055C RPT6Q01939 405 aaKnown RBP12.18□□□□□ -0.46
SPT8YLR055C EIS1Q05050 843 aaKnown RBP12.18□□□□□ -0.46
SPT8YLR055C NBL1Q3E7Y6 73 aa12.18□□□□□ -0.46
SPT8YLR055C HVG1P0CE11 249 aa12.17□□□□□ -0.46
SPT8YLR055C RPL8BP29453 256 aaKnown RBP12.17□□□□□ -0.46
SPT8YLR055C OCT1P35999 772 aa12.17□□□□□ -0.46
SPT8YLR055C ETP1P38748 585 aaKnown RBP12.17□□□□□ -0.46
SPT8YLR055C TIF4631P39935 952 aaKnown RBP12.17□□□□□ -0.46
SPT8YLR055C VPS30Q02948 557 aa12.17□□□□□ -0.46
SPT8YLR055C RRP6Q12149 733 aaKnown RBP12.17□□□□□ -0.46
SPT8YLR055C MTF2P10849 440 aa12.16□□□□□ -0.46
SPT8YLR055C ASF1P32447 279 aa12.16□□□□□ -0.46
SPT8YLR055C CSM2P40465 213 aa12.16□□□□□ -0.46
SPT8YLR055C ERG12P07277 443 aa12.16□□□□□ -0.46
SPT8YLR055C SAM2P19358 384 aaKnown RBP12.16□□□□□ -0.46
SPT8YLR055C ECM32P32644 1121 aaKnown RBP12.16□□□□□ -0.46
SPT8YLR055C ALG2P43636 503 aa12.16□□□□□ -0.46
SPT8YLR055C FOL1P53848 824 aa12.16□□□□□ -0.46
SPT8YLR055C EBS1Q03466 884 aaKnown RBP12.16□□□□□ -0.46
SPT8YLR055C MYO5Q04439 1219 aaKnown RBP12.16□□□□□ -0.46
SPT8YLR055C SUB2Q07478 446 aaKnown RBP12.16□□□□□ -0.46
SPT8YLR055C RUD3Q12234 484 aaKnown RBP12.16□□□□□ -0.46
SPT8YLR055C TUS1Q06412 1307 aa12.15□□□□□ -0.46
SPT8YLR055C SPO11P23179 398 aa12.15□□□□□ -0.46
SPT8YLR055C BYE1P36106 594 aa12.15□□□□□ -0.46
SPT8YLR055C SMF1P38925 575 aa12.15□□□□□ -0.46
SPT8YLR055C SHQ1P40486 507 aaPredicted RBP12.15□□□□□ -0.46
SPT8YLR055C EFM4P40516 257 aa12.15□□□□□ -0.46
SPT8YLR055C LSC2P53312 427 aa12.15□□□□□ -0.46
SPT8YLR055C YLR287CQ05881 355 aa12.15□□□□□ -0.46
SPT8YLR055C PSR2Q07949 397 aa12.15□□□□□ -0.46
SPT8YLR055C FBP1P09201 348 aa12.14□□□□□ -0.47
SPT8YLR055C SWE1P32944 819 aa12.14□□□□□ -0.47
SPT8YLR055C RXT2P38255 430 aa12.14□□□□□ -0.47
SPT8YLR055C UBP9P39967 754 aa12.14□□□□□ -0.47
SPT8YLR055C GDE1Q02979 1223 aa12.14□□□□□ -0.47
SPT8YLR055C HIS4P00815 799 aaKnown RBP12.14□□□□□ -0.47
SPT8YLR055C BCD1P38772 366 aa12.14□□□□□ -0.47
SPT8YLR055C PES4P39684 611 aa12.14□□□□□ -0.47
SPT8YLR055C PCI8P40512 444 aa12.14□□□□□ -0.47
SPT8YLR055C LYS14P40971 790 aa12.14□□□□□ -0.47
SPT8YLR055C SFH1Q06168 426 aa12.14□□□□□ -0.47
SPT8YLR055C YDJ1P25491 409 aaKnown RBP12.13□□□□□ -0.47
SPT8YLR055C MIP6P38760 659 aaKnown RBP12.13□□□□□ -0.47
SPT8YLR055C MIC19P43594 170 aa12.13□□□□□ -0.47
SPT8YLR055C CST9Q06032 482 aa12.13□□□□□ -0.47
SPT8YLR055C CLF1Q12309 687 aaPredicted RBP12.13□□□□□ -0.47
SPT8YLR055C YOR111WQ99210 232 aa12.13□□□□□ -0.47
SPT8YLR055C NUC1P08466 329 aa12.12□□□□□ -0.47
SPT8YLR055C SPO12P17123 173 aa12.12□□□□□ -0.47
SPT8YLR055C NFU1P32860 256 aa12.12□□□□□ -0.47
SPT8YLR055C MAL31P38156 614 aa12.12□□□□□ -0.47
SPT8YLR055C UTP5Q04177 643 aaKnown RBP12.12□□□□□ -0.47
SPT8YLR055C SPP382Q06411 708 aaPredicted RBP12.12□□□□□ -0.47
SPT8YLR055C HIR1P32479 840 aa12.11□□□□□ -0.47
SPT8YLR055C VPS45P38932 577 aa12.11□□□□□ -0.47
SPT8YLR055C VAB2P40003 282 aa12.11□□□□□ -0.47
SPT8YLR055C RRD1P40454 393 aaKnown RBP12.11□□□□□ -0.47
SPT8YLR055C JIP4Q03361 876 aa12.11□□□□□ -0.47
SPT8YLR055C YPL225WQ08971 146 aaKnown RBP12.11□□□□□ -0.47
SPT8YLR055C YOR223WQ12015 292 aa12.11□□□□□ -0.47
SPT8YLR055C RAD57P25301 460 aa12.11□□□□□ -0.47
SPT8YLR055C PSO2P30620 661 aa12.11□□□□□ -0.47
SPT8YLR055C SRB4P32569 687 aa12.11□□□□□ -0.47
SPT8YLR055C CNS1P33313 385 aa12.11□□□□□ -0.47
SPT8YLR055C AIP1P46680 615 aaKnown RBP12.11□□□□□ -0.47
SPT8YLR055C YJL007CP47080 104 aa12.11□□□□□ -0.47
SPT8YLR055C YML037CQ03703 340 aa12.11□□□□□ -0.47
SPT8YLR055C YOR296WQ08748 1289 aa12.11□□□□□ -0.47
SPT8YLR055C RNR3P21672 869 aaKnown RBP12.1□□□□□ -0.47
SPT8YLR055C MCD4P36051 919 aa12.1□□□□□ -0.47
SPT8YLR055C APE3P37302 537 aaKnown RBP12.1□□□□□ -0.47
SPT8YLR055C HFM1P51979 1187 aa12.1□□□□□ -0.47
SPT8YLR055C SOL4P53315 255 aa12.1□□□□□ -0.47
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms