RNA–Protein interactions for RNA: YKR094C

RPL40B, Transcript of Ubiquitin-ribosomal 60S subunit protein L40B fusion protein, yeastyeast

Gene RPL40B, Length 387 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPL40BYKR094C SRM1P21827 482 aa4.48□□□□□ -1.69
RPL40BYKR094C GEF1P37020 779 aa4.48□□□□□ -1.69
RPL40BYKR094C YFL054CP43549 646 aa4.48□□□□□ -1.69
RPL40BYKR094C TMA10Q06177 86 aa4.48□□□□□ -1.69
RPL40BYKR094C CMP2P14747 604 aa4.47□□□□□ -1.69
RPL40BYKR094C CDC20P26309 610 aa4.47□□□□□ -1.69
RPL40BYKR094C DOM34P33309 386 aa4.47□□□□□ -1.69
RPL40BYKR094C PIC2P40035 300 aa4.47□□□□□ -1.69
RPL40BYKR094C MSE1P48525 536 aa4.47□□□□□ -1.69
RPL40BYKR094C SLI1P53304 468 aa4.47□□□□□ -1.69
RPL40BYKR094C OXR1Q08952 273 aa4.47□□□□□ -1.69
RPL40BYKR094C HCM1P25364 564 aa4.46□□□□□ -1.7
RPL40BYKR094C LST4P34239 828 aa4.46□□□□□ -1.7
RPL40BYKR094C SUN4P53616 420 aa4.46□□□□□ -1.7
RPL40BYKR094C RIB2Q12362 591 aaKnown RBP4.46□□□□□ -1.7
RPL40BYKR094C RPN3P40016 523 aaKnown RBP4.45□□□□□ -1.7
RPL40BYKR094C MCM6P53091 1017 aaKnown RBP4.45□□□□□ -1.7
RPL40BYKR094C RAT1Q02792 1006 aaKnown RBP4.45□□□□□ -1.7
RPL40BYKR094C RSM24Q03976 319 aa4.45□□□□□ -1.7
RPL40BYKR094C ACK1Q07622 623 aaPredicted RBP4.45□□□□□ -1.7
RPL40BYKR094C GPB1Q08886 897 aa4.45□□□□□ -1.7
RPL40BYKR094C HXK1P04806 485 aaKnown RBP4.44□□□□□ -1.7
RPL40BYKR094C CDC6P09119 513 aa4.44□□□□□ -1.7
RPL40BYKR094C RFC5P38251 354 aa4.44□□□□□ -1.7
RPL40BYKR094C RXT3Q07458 294 aa4.44□□□□□ -1.7
RPL40BYKR094C YPL260WQ08977 551 aa4.44□□□□□ -1.7
RPL40BYKR094C MNN10P50108 393 aaKnown RBP4.43□□□□□ -1.7
RPL40BYKR094C MAP1Q01662 387 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RPL40BYKR094C YAP6Q03935 383 aa4.43□□□□□ -1.7
RPL40BYKR094C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.43□□□□□ -1.7not detected
RPL40BYKR094C WHI5Q12416 295 aa4.43□□□□□ -1.7
RPL40BYKR094C STE11P23561 717 aa4.42□□□□□ -1.7
RPL40BYKR094C PPX1P38698 397 aa4.42□□□□□ -1.7
RPL40BYKR094C GTF1P53260 183 aaPredicted RBP4.42□□□□□ -1.7
RPL40BYKR094C ROD1Q02805 837 aa4.42□□□□□ -1.7
RPL40BYKR094C NTO1Q12311 748 aa4.42□□□□□ -1.7
RPL40BYKR094C RPT1P33299 467 aaKnown RBP4.41□□□□□ -1.7
RPL40BYKR094C PHO23P50947 330 aa4.41□□□□□ -1.7
RPL40BYKR094C YPT53P36019 220 aa4.4□□□□□ -1.71
RPL40BYKR094C AIM21P40563 679 aa4.4□□□□□ -1.71
RPL40BYKR094C THI12P42883 340 aa4.4□□□□□ -1.71
RPL40BYKR094C THI5P43534 340 aa4.4□□□□□ -1.71
RPL40BYKR094C THI11P47183 340 aa4.4□□□□□ -1.71
RPL40BYKR094C THI13Q07748 340 aa4.4□□□□□ -1.71
RPL40BYKR094C SVS1Q12254 260 aa4.4□□□□□ -1.71
RPL40BYKR094C YER152CP10356 443 aa4.39□□□□□ -1.71
RPL40BYKR094C APL1P27351 700 aa4.39□□□□□ -1.71
RPL40BYKR094C PMI40P29952 429 aaKnown RBP4.39□□□□□ -1.71
RPL40BYKR094C MKK2P32491 506 aa4.39□□□□□ -1.71
RPL40BYKR094C SSF1P38789 453 aaPredicted RBP4.39□□□□□ -1.71
RPL40BYKR094C GCV2P49095 1034 aa4.39□□□□□ -1.71
RPL40BYKR094C VPS62P53285 467 aa4.39□□□□□ -1.71
RPL40BYKR094C PBP1P53297 722 aaKnown RBP4.39□□□□□ -1.71
RPL40BYKR094C YLR224WQ05947 369 aa4.39□□□□□ -1.71
RPL40BYKR094C TAF13P11747 167 aa4.38□□□□□ -1.71
RPL40BYKR094C KIN2P13186 1147 aaKnown RBP4.38□□□□□ -1.71
RPL40BYKR094C MSC6Q08818 692 aaKnown RBP4.38□□□□□ -1.71
RPL40BYKR094C EMC1P25574 760 aa4.37□□□□□ -1.71
RPL40BYKR094C CHS7P38843 316 aa4.37□□□□□ -1.71
RPL40BYKR094C SIW14P53965 281 aa4.37□□□□□ -1.71
RPL40BYKR094C HMI1Q12039 706 aa4.37□□□□□ -1.71
RPL40BYKR094C PMA1P05030 918 aaKnown RBP4.36□□□□□ -1.71
RPL40BYKR094C PRE9P23638 258 aaKnown RBP4.36□□□□□ -1.71
RPL40BYKR094C MLS1P30952 554 aa4.36□□□□□ -1.71
RPL40BYKR094C RGD1P38339 666 aa4.36□□□□□ -1.71
RPL40BYKR094C CTF4Q01454 927 aa4.36□□□□□ -1.71
RPL40BYKR094C KIN4Q01919 800 aa4.36□□□□□ -1.71
RPL40BYKR094C SIZ1Q04195 904 aa4.36□□□□□ -1.71
RPL40BYKR094C RAD53P22216 821 aa4.35□□□□□ -1.71
RPL40BYKR094C STM1P39015 273 aaKnown RBP4.35□□□□□ -1.71
RPL40BYKR094C HXT13P39924 564 aa4.35□□□□□ -1.71
RPL40BYKR094C HXT17P53631 564 aa4.35□□□□□ -1.71
RPL40BYKR094C HXT15P54854 567 aa4.35□□□□□ -1.71
RPL40BYKR094C MCD1Q12158 566 aa4.35□□□□□ -1.71
RPL40BYKR094C SYP1P25623 870 aaKnown RBP4.34□□□□□ -1.71
RPL40BYKR094C MRPS18P42847 217 aa4.34□□□□□ -1.71
RPL40BYKR094C GNP1P48813 663 aa4.34□□□□□ -1.71
RPL40BYKR094C MSC2Q03455 724 aa4.34□□□□□ -1.71
RPL40BYKR094C BAS1P22035 811 aa4.33□□□□□ -1.72
RPL40BYKR094C DCG1P32460 244 aa4.33□□□□□ -1.72
RPL40BYKR094C SEC8P32855 1065 aa4.33□□□□□ -1.72
RPL40BYKR094C MSS4P38994 779 aa4.33□□□□□ -1.72
RPL40BYKR094C CNN1P43618 361 aa4.33□□□□□ -1.72
RPL40BYKR094C YGR122WP53272 402 aa4.33□□□□□ -1.72
RPL40BYKR094C ATG13Q06628 738 aa4.33□□□□□ -1.72
RPL40BYKR094C MRL1Q06815 381 aa4.33□□□□□ -1.72
RPL40BYKR094C NOP12Q08208 459 aaKnown RBP4.33□□□□□ -1.72
RPL40BYKR094C DBP5P20449 482 aaKnown RBP4.32□□□□□ -1.72
RPL40BYKR094C DEF1P35732 738 aaKnown RBP4.32□□□□□ -1.72
RPL40BYKR094C PLB1P39105 664 aa4.32□□□□□ -1.72
RPL40BYKR094C SIP5P40210 489 aaKnown RBP4.32□□□□□ -1.72
RPL40BYKR094C ENT3P47160 408 aa4.32□□□□□ -1.72
RPL40BYKR094C ACE2P21192 770 aa4.31□□□□□ -1.72
RPL40BYKR094C UGA2P38067 497 aa4.31□□□□□ -1.72
RPL40BYKR094C URN1Q06525 465 aaKnown RBP4.31□□□□□ -1.72
RPL40BYKR094C RAD2P07276 1031 aa4.3□□□□□ -1.72
RPL40BYKR094C PEP7P32609 515 aa4.3□□□□□ -1.72
RPL40BYKR094C IPL1P38991 367 aa4.3□□□□□ -1.72
RPL40BYKR094C MXR1P40029 184 aa4.3□□□□□ -1.72
RPL40BYKR094C MPH1P40562 993 aa4.3□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 11.1 ms