RNA–Protein interactions for RNA: YHR120W

MSH1, Transcript of DNA-binding protein of the mitochondria, yeastyeast

Gene MSH1, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSH1YHR120W POX1P13711 748 aa5.71□□□□□ -1.5
MSH1YHR120W STI1P15705 589 aaKnown RBP RIP-Chip data5.71□□□□□ -1.5not detected
MSH1YHR120W SEC8P32855 1065 aa5.71□□□□□ -1.5
MSH1YHR120W RXT2P38255 430 aa5.71□□□□□ -1.5
MSH1YHR120W NOC2P39744 710 aaKnown RBP5.71□□□□□ -1.5
MSH1YHR120W YKE2P52553 114 aa5.71□□□□□ -1.5
MSH1YHR120W ARP5P53946 755 aa5.71□□□□□ -1.5
MSH1YHR120W TRM11Q12463 433 aa5.71□□□□□ -1.5
MSH1YHR120W TY1B-AO13527 1196 aaKnown RBP5.7□□□□□ -1.5
MSH1YHR120W PDC1P06169 563 aaKnown RBP5.7□□□□□ -1.5
MSH1YHR120W SWI4P25302 1093 aaKnown RBP5.7□□□□□ -1.5
MSH1YHR120W PWP2P25635 923 aaKnown RBP5.7□□□□□ -1.5
MSH1YHR120W MCM2P29469 868 aa5.7□□□□□ -1.5
MSH1YHR120W BMH2P34730 273 aaKnown RBP5.7□□□□□ -1.5
MSH1YHR120W CCT3P39077 534 aaKnown RBP5.7□□□□□ -1.5
MSH1YHR120W PCI8P40512 444 aa5.7□□□□□ -1.5
MSH1YHR120W SKP2P42843 763 aa5.7□□□□□ -1.5
MSH1YHR120W TTI1P36097 1038 aa5.7□□□□□ -1.5
MSH1YHR120W YPL150WQ12152 901 aa5.7□□□□□ -1.5
MSH1YHR120W HOP09932 586 aa5.69□□□□□ -1.5
MSH1YHR120W HCA4P20448 770 aaKnown RBP5.69□□□□□ -1.5
MSH1YHR120W MAK11P20484 414 aaKnown RBP5.69□□□□□ -1.5
MSH1YHR120W TIM23P32897 222 aa5.69□□□□□ -1.5
MSH1YHR120W MIC60P36112 540 aa5.69□□□□□ -1.5
MSH1YHR120W SUL1P38359 859 aa5.69□□□□□ -1.5
MSH1YHR120W CCT5P40413 562 aaKnown RBP5.69□□□□□ -1.5
MSH1YHR120W STU2P46675 888 aa5.69□□□□□ -1.5
MSH1YHR120W YPL034WQ03083 165 aa5.69□□□□□ -1.5
MSH1YHR120W PSK2Q08217 1101 aa5.69□□□□□ -1.5
MSH1YHR120W OXR1Q08952 273 aa5.69□□□□□ -1.5
MSH1YHR120W KTR2P33550 425 aa5.69□□□□□ -1.5
MSH1YHR120W FIR1P40020 876 aa5.69□□□□□ -1.5
MSH1YHR120W YGL138CP53122 345 aa5.69□□□□□ -1.5
MSH1YHR120W GDE1Q02979 1223 aa5.69□□□□□ -1.5
MSH1YHR120W YLR407WQ06070 228 aa5.69□□□□□ -1.5
MSH1YHR120W WHI4Q07655 649 aaKnown RBP5.69□□□□□ -1.5
MSH1YHR120W APC11Q12157 165 aa5.69□□□□□ -1.5
MSH1YHR120W PRX1P34227 261 aaKnown RBP5.69□□□□□ -1.5
MSH1YHR120W FLR1P38124 548 aa5.69□□□□□ -1.5
MSH1YHR120W RPN10P38886 268 aaKnown RBP5.69□□□□□ -1.5
MSH1YHR120W GIS4Q04233 774 aa5.69□□□□□ -1.5
MSH1YHR120W MBR1P23493 339 aa5.68□□□□□ -1.5
MSH1YHR120W CLA4P48562 842 aa5.68□□□□□ -1.5
MSH1YHR120W PEX14P53112 341 aa5.68□□□□□ -1.5
MSH1YHR120W DAK1P54838 584 aaKnown RBP5.68□□□□□ -1.5
MSH1YHR120W ESC2Q06340 456 aa5.68□□□□□ -1.5
MSH1YHR120W ARP6Q12509 438 aa5.68□□□□□ -1.5
MSH1YHR120W DDP1Q99321 188 aaKnown RBP5.68□□□□□ -1.5
MSH1YHR120W QCR6P00127 147 aa5.68□□□□□ -1.5
MSH1YHR120W MRPL10P36520 322 aa5.68□□□□□ -1.5
MSH1YHR120W NPR3P38742 1146 aa5.68□□□□□ -1.5
MSH1YHR120W FMP30Q02883 468 aa5.68□□□□□ -1.5
MSH1YHR120W SMD2Q06217 110 aaKnown RBP5.68□□□□□ -1.5
MSH1YHR120W SES1P07284 462 aaKnown RBP5.67□□□□□ -1.5
MSH1YHR120W GPT2P36148 743 aa5.67□□□□□ -1.5
MSH1YHR120W YHL017WP38745 532 aa5.67□□□□□ -1.5
MSH1YHR120W RPS7BP48164 190 aaKnown RBP5.67□□□□□ -1.5
MSH1YHR120W UBP15P50101 1230 aa5.67□□□□□ -1.5
MSH1YHR120W CBP3P21560 335 aa5.67□□□□□ -1.5
MSH1YHR120W VPS1P21576 704 aaKnown RBP5.67□□□□□ -1.5
MSH1YHR120W SLX5P32828 619 aaKnown RBP5.67□□□□□ -1.5
MSH1YHR120W YFL040WP43562 540 aa5.67□□□□□ -1.5
MSH1YHR120W CTF18P49956 741 aa5.67□□□□□ -1.5
MSH1YHR120W YGR273CP53329 174 aa5.67□□□□□ -1.5
MSH1YHR120W BNI5P53890 448 aaKnown RBP5.67□□□□□ -1.5
MSH1YHR120W ORC4P54791 529 aa5.67□□□□□ -1.5
MSH1YHR120W OYE2Q03558 400 aaKnown RBP5.67□□□□□ -1.5
MSH1YHR120W ELG1Q12050 791 aa5.67□□□□□ -1.5
MSH1YHR120W CDC6P09119 513 aa5.66□□□□□ -1.5
MSH1YHR120W MAS2P11914 482 aa5.66□□□□□ -1.5
MSH1YHR120W FRS2P15625 503 aaKnown RBP5.66□□□□□ -1.5
MSH1YHR120W SAS3P34218 831 aa5.66□□□□□ -1.5
MSH1YHR120W WHI3P34761 661 aaKnown RBP5.66□□□□□ -1.5
MSH1YHR120W UBP11P36026 717 aa5.66□□□□□ -1.5
MSH1YHR120W SCY1P53009 804 aa5.66□□□□□ -1.5
MSH1YHR120W NAF1P53919 492 aaKnown RBP5.66□□□□□ -1.5
MSH1YHR120W RTP1Q12751 981 aa5.66□□□□□ -1.5
MSH1YHR120W TAO3P40468 2376 aa5.66□□□□□ -1.5
MSH1YHR120W SRO9P25567 434 aaKnown RBP5.66□□□□□ -1.5
MSH1YHR120W CLB5P30283 435 aa5.66□□□□□ -1.5
MSH1YHR120W ISW1P38144 1129 aa5.66□□□□□ -1.5
MSH1YHR120W RFT1P38206 574 aaPredicted RBP5.66□□□□□ -1.5
MSH1YHR120W CIT3P43635 486 aa5.66□□□□□ -1.5
MSH1YHR120W ENT3P47160 408 aa5.66□□□□□ -1.5
MSH1YHR120W AIM33Q04516 312 aa5.66□□□□□ -1.5
MSH1YHR120W FKS1P38631 1876 aaKnown RBP5.66□□□□□ -1.5
MSH1YHR120W CYC8P14922 966 aa5.65□□□□□ -1.5
MSH1YHR120W MIP1P15801 1254 aa5.65□□□□□ -1.5
MSH1YHR120W DID4P36108 232 aa5.65□□□□□ -1.5
MSH1YHR120W BUD6P41697 788 aa5.65□□□□□ -1.5
MSH1YHR120W RET3P53600 189 aa5.65□□□□□ -1.5
MSH1YHR120W CEX1Q12453 761 aa5.65□□□□□ -1.5
MSH1YHR120W CPA2P03965 1118 aaKnown RBP5.65□□□□□ -1.5
MSH1YHR120W ATE1P16639 503 aa5.65□□□□□ -1.5
MSH1YHR120W GAA1P39012 614 aa5.65□□□□□ -1.5
MSH1YHR120W DSE4P53753 1117 aa5.65□□□□□ -1.5
MSH1YHR120W VPS72Q03388 795 aa5.65□□□□□ -1.5
MSH1YHR120W YLL058WQ12198 575 aa5.65□□□□□ -1.5
MSH1YHR120W YDR524C-BQ3E6R4 66 aa5.65□□□□□ -1.5
MSH1YHR120W SNA3P14359 133 aa5.65□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 42.4 ms