RNA–Protein interactions for RNA: YGL028C

SCW11, Transcript of Cell wall protein with similarity to glucanases, yeast

Gene SCW11, Length 1,629 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCW11	YGL028C	PHO4	P07270	312 aa	Known RBP	3.15	□□□□□ -1.9
SCW11	YGL028C	ADD66	P36040	267 aa		3.15	□□□□□ -1.9
SCW11	YGL028C	RSB1	Q08417	382 aa		3.15	□□□□□ -1.9
SCW11	YGL028C	PMA1	P05030	918 aa	Known RBP	3.15	□□□□□ -1.91
SCW11	YGL028C	CMP2	P14747	604 aa		3.15	□□□□□ -1.91
SCW11	YGL028C	VPS53	P47061	822 aa		3.15	□□□□□ -1.91
SCW11	YGL028C	OXR1	Q08952	273 aa		3.15	□□□□□ -1.91
SCW11	YGL028C	CDC6	P09119	513 aa		3.14	□□□□□ -1.91
SCW11	YGL028C	MSS4	P38994	779 aa		3.14	□□□□□ -1.91
SCW11	YGL028C	DAK2	P43550	591 aa		3.14	□□□□□ -1.91
SCW11	YGL028C	YGL140C	P53120	1219 aa		3.14	□□□□□ -1.91
SCW11	YGL028C	RKM2	Q03942	479 aa		3.14	□□□□□ -1.91
SCW11	YGL028C	TOS4	Q06266	489 aa		3.14	□□□□□ -1.91
SCW11	YGL028C	SPO21	Q12411	609 aa		3.14	□□□□□ -1.91
SCW11	YGL028C	DEF1	P35732	738 aa	Known RBP	3.13	□□□□□ -1.91
SCW11	YGL028C	RDH54	P38086	958 aa		3.13	□□□□□ -1.91
SCW11	YGL028C	ADI1	Q03677	179 aa		3.13	□□□□□ -1.91
SCW11	YGL028C	RSM24	Q03976	319 aa		3.13	□□□□□ -1.91
SCW11	YGL028C	EST2	Q06163	884 aa		3.13	□□□□□ -1.91
SCW11	YGL028C	HEM13	P11353	328 aa	Known RBP	3.12	□□□□□ -1.91
SCW11	YGL028C	SRM1	P21827	482 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	KIP1	P28742	1111 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	MET4	P32389	672 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	OAR1	P35731	278 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	THI12	P42883	340 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	THI5	P43534	340 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	THI11	P47183	340 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	PBP1	P53297	722 aa	Known RBP	3.12	□□□□□ -1.91
SCW11	YGL028C	TNA1	P53322	534 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	YAP6	Q03935	383 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	YLR224W	Q05947	369 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	BDF2	Q07442	638 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	THI13	Q07748	340 aa		3.12	□□□□□ -1.91
SCW11	YGL028C	DED1	P06634	604 aa	Known RBP	3.11	□□□□□ -1.91
SCW11	YGL028C	PIK1	P39104	1066 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	GPB2	P39717	880 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	UBA2	P52488	636 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	YPL109C	Q02981	657 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	PTC5	Q12511	572 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	DCG1	P32460	244 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	AFG2	P32794	780 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	BAP2	P38084	609 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	MOH1	P38191	138 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	PPX1	P38698	397 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	ATF1	P40353	525 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	VPS62	P53285	467 aa		3.11	□□□□□ -1.91
SCW11	YGL028C	HOS3	Q02959	697 aa	Known RBP	3.11	□□□□□ -1.91
SCW11	YGL028C	MSC6	Q08818	692 aa	Known RBP	3.11	□□□□□ -1.91
SCW11	YGL028C	SSF1	P38789	453 aa	Predicted RBP	3.1	□□□□□ -1.91
SCW11	YGL028C	FAA3	P39002	694 aa		3.1	□□□□□ -1.91
SCW11	YGL028C	STM1	P39015	273 aa	Known RBP	3.1	□□□□□ -1.91
SCW11	YGL028C	SEC23	P15303	768 aa	Known RBP	3.09	□□□□□ -1.91
SCW11	YGL028C	ALG3	P38179	458 aa		3.09	□□□□□ -1.91
SCW11	YGL028C	RFC5	P38251	354 aa		3.09	□□□□□ -1.91
SCW11	YGL028C	PIC2	P40035	300 aa		3.09	□□□□□ -1.91
SCW11	YGL028C	GTF1	P53260	183 aa	Predicted RBP	3.09	□□□□□ -1.91
SCW11	YGL028C	SNF5	P18480	905 aa		3.08	□□□□□ -1.92
SCW11	YGL028C	RPT1	P33299	467 aa	Known RBP	3.08	□□□□□ -1.92
SCW11	YGL028C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	3.08	□□□□□ -1.92	not detected
SCW11	YGL028C	RIB2	Q12362	591 aa	Known RBP	3.08	□□□□□ -1.92
SCW11	YGL028C	WHI5	Q12416	295 aa		3.08	□□□□□ -1.92
SCW11	YGL028C	HXK1	P04806	485 aa	Known RBP	3.08	□□□□□ -1.92
SCW11	YGL028C	EMC1	P25574	760 aa		3.08	□□□□□ -1.92
SCW11	YGL028C	LGE1	Q02796	332 aa	Known RBP	3.08	□□□□□ -1.92
SCW11	YGL028C	YPL260W	Q08977	551 aa		3.07	□□□□□ -1.92
SCW11	YGL028C	HMI1	Q12039	706 aa		3.07	□□□□□ -1.92
SCW11	YGL028C	PRE9	P23638	258 aa	Known RBP	3.06	□□□□□ -1.92
SCW11	YGL028C	RPN3	P40016	523 aa	Known RBP	3.06	□□□□□ -1.92
SCW11	YGL028C	MRPS18	P42847	217 aa		3.06	□□□□□ -1.92
SCW11	YGL028C	GCV2	P49095	1034 aa		3.06	□□□□□ -1.92
SCW11	YGL028C	ROD1	Q02805	837 aa		3.06	□□□□□ -1.92
SCW11	YGL028C	TAF13	P11747	167 aa		3.05	□□□□□ -1.92
SCW11	YGL028C	KIN2	P13186	1147 aa	Known RBP	3.05	□□□□□ -1.92
SCW11	YGL028C	RAT1	Q02792	1006 aa	Known RBP	3.05	□□□□□ -1.92
SCW11	YGL028C	HRR25	P29295	494 aa	Known RBP	3.04	□□□□□ -1.92
SCW11	YGL028C	YFL054C	P43549	646 aa		3.04	□□□□□ -1.92
SCW11	YGL028C	NOP12	Q08208	459 aa	Known RBP	3.04	□□□□□ -1.92
SCW11	YGL028C	MCD1	Q12158	566 aa		3.04	□□□□□ -1.92
SCW11	YGL028C	APL1	P27351	700 aa		3.04	□□□□□ -1.92
SCW11	YGL028C	SEC20	P28791	383 aa		3.04	□□□□□ -1.92
SCW11	YGL028C	MKK2	P32491	506 aa		3.04	□□□□□ -1.92
SCW11	YGL028C	IPL1	P38991	367 aa		3.04	□□□□□ -1.92
SCW11	YGL028C	PLB1	P39105	664 aa		3.04	□□□□□ -1.92
SCW11	YGL028C	MAP1	Q01662	387 aa	Known RBP RIP-Chip data	3.04	□□□□□ -1.92	not detected
SCW11	YGL028C	AIM39	Q08223	395 aa		3.04	□□□□□ -1.92
SCW11	YGL028C	SIP5	P40210	489 aa	Known RBP	3.03	□□□□□ -1.92
SCW11	YGL028C	IOC3	P43596	787 aa		3.03	□□□□□ -1.92
SCW11	YGL028C	YGR122W	P53272	402 aa		3.03	□□□□□ -1.92
SCW11	YGL028C	SIW14	P53965	281 aa		3.03	□□□□□ -1.92
SCW11	YGL028C	SVS1	Q12254	260 aa		3.03	□□□□□ -1.92
SCW11	YGL028C	YER152C	P10356	443 aa		3.02	□□□□□ -1.93
SCW11	YGL028C	MLS1	P30952	554 aa		3.02	□□□□□ -1.93
SCW11	YGL028C	SEC8	P32855	1065 aa		3.02	□□□□□ -1.93
SCW11	YGL028C	CUE2	P36075	443 aa	Known RBP	3.02	□□□□□ -1.93
SCW11	YGL028C	RGD1	P38339	666 aa		3.02	□□□□□ -1.93
SCW11	YGL028C	STU2	P46675	888 aa		3.02	□□□□□ -1.93
SCW11	YGL028C	SIZ1	Q04195	904 aa		3.02	□□□□□ -1.93
SCW11	YGL028C	MRL1	Q06815	381 aa		3.02	□□□□□ -1.93
SCW11	YGL028C	RAD2	P07276	1031 aa		3.01	□□□□□ -1.93
SCW11	YGL028C	SYP1	P25623	870 aa	Known RBP	3.01	□□□□□ -1.93

Retrieved 100 of 5,963 RNA–protein pairs in 72.5 ms