RNA–Protein interactions for RNA: YER128W

VFA1, Transcript of Protein that interacts with Vps4p and has a role in vacuolar sorting, yeastyeast

Gene VFA1, Length 612 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VFA1YER128W PHO4P07270 312 aaKnown RBP4.48□□□□□ -1.69
VFA1YER128W HEM13P11353 328 aaKnown RBP4.48□□□□□ -1.69
VFA1YER128W HCM1P25364 564 aa4.48□□□□□ -1.69
VFA1YER128W ADI1Q03677 179 aa4.48□□□□□ -1.69
VFA1YER128W RXT3Q07458 294 aa4.48□□□□□ -1.69
VFA1YER128W OXR1Q08952 273 aa4.48□□□□□ -1.69
VFA1YER128W DED1P06634 604 aaKnown RBP4.47□□□□□ -1.69
VFA1YER128W CMP2P14747 604 aa4.47□□□□□ -1.69
VFA1YER128W ALG3P38179 458 aa4.47□□□□□ -1.69
VFA1YER128W YHL050CP38721 697 aa4.47□□□□□ -1.69
VFA1YER128W YHR219WP38900 624 aa4.47□□□□□ -1.69
VFA1YER128W ACK1Q07622 623 aaPredicted RBP4.47□□□□□ -1.69
VFA1YER128W GAL10P04397 699 aa4.46□□□□□ -1.7
VFA1YER128W SEC23P15303 768 aaKnown RBP4.46□□□□□ -1.7
VFA1YER128W SNF5P18480 905 aa4.46□□□□□ -1.7
VFA1YER128W STE11P23561 717 aa4.46□□□□□ -1.7
VFA1YER128W CDC20P26309 610 aa4.46□□□□□ -1.7
VFA1YER128W RFC5P38251 354 aa4.46□□□□□ -1.7
VFA1YER128W RPN3P40016 523 aaKnown RBP4.46□□□□□ -1.7
VFA1YER128W MNN10P50108 393 aaKnown RBP4.46□□□□□ -1.7
VFA1YER128W MCM6P53091 1017 aaKnown RBP4.46□□□□□ -1.7
VFA1YER128W IOC4Q04213 475 aa4.46□□□□□ -1.7
VFA1YER128W TMA10Q06177 86 aa4.46□□□□□ -1.7
VFA1YER128W DAK2P43550 591 aa4.45□□□□□ -1.7
VFA1YER128W PBP1P53297 722 aaKnown RBP4.45□□□□□ -1.7
VFA1YER128W YPL109CQ02981 657 aa4.45□□□□□ -1.7
VFA1YER128W GPB1Q08886 897 aa4.45□□□□□ -1.7
VFA1YER128W YPL260WQ08977 551 aa4.45□□□□□ -1.7
VFA1YER128W LST4P34239 828 aa4.44□□□□□ -1.7
VFA1YER128W YPT53P36019 220 aa4.44□□□□□ -1.7
VFA1YER128W SLI1P53304 468 aa4.44□□□□□ -1.7
VFA1YER128W SUN4P53616 420 aa4.44□□□□□ -1.7
VFA1YER128W TOS4Q06266 489 aa4.44□□□□□ -1.7
VFA1YER128W SRM1P21827 482 aa4.43□□□□□ -1.7
VFA1YER128W PMI40P29952 429 aaKnown RBP4.43□□□□□ -1.7
VFA1YER128W AIM21P40563 679 aa4.43□□□□□ -1.7
VFA1YER128W NTO1Q12311 748 aa4.43□□□□□ -1.7
VFA1YER128W KIN2P13186 1147 aaKnown RBP4.42□□□□□ -1.7
VFA1YER128W GEF1P37020 779 aa4.42□□□□□ -1.7
VFA1YER128W VTS1Q08831 523 aaKnown RBP RIP-Chip data4.42□□□□□ -1.7not detected
VFA1YER128W MET4P32389 672 aa4.41□□□□□ -1.7
VFA1YER128W FAA3P39002 694 aa4.41□□□□□ -1.7
VFA1YER128W CDC6P09119 513 aa4.4□□□□□ -1.71
VFA1YER128W TAF13P11747 167 aa4.4□□□□□ -1.71
VFA1YER128W APL1P27351 700 aa4.4□□□□□ -1.71
VFA1YER128W DEF1P35732 738 aaKnown RBP4.4□□□□□ -1.71
VFA1YER128W PIC2P40035 300 aa4.4□□□□□ -1.71
VFA1YER128W GTF1P53260 183 aaPredicted RBP4.4□□□□□ -1.71
VFA1YER128W CTF4Q01454 927 aa4.4□□□□□ -1.71
VFA1YER128W YAP6Q03935 383 aa4.4□□□□□ -1.71
VFA1YER128W SVS1Q12254 260 aa4.4□□□□□ -1.71
VFA1YER128W RIB2Q12362 591 aaKnown RBP4.4□□□□□ -1.71
VFA1YER128W YFL054CP43549 646 aa4.39□□□□□ -1.71
VFA1YER128W PHO23P50947 330 aa4.39□□□□□ -1.71
VFA1YER128W CWC22P53333 577 aaKnown RBP4.39□□□□□ -1.71
VFA1YER128W MAP1Q01662 387 aaKnown RBP RIP-Chip data4.39□□□□□ -1.71not detected
VFA1YER128W RAT1Q02792 1006 aaKnown RBP4.39□□□□□ -1.71
VFA1YER128W TOP1P04786 769 aa4.38□□□□□ -1.71
VFA1YER128W HXK1P04806 485 aaKnown RBP4.38□□□□□ -1.71
VFA1YER128W PPX1P38698 397 aa4.38□□□□□ -1.71
VFA1YER128W VPS62P53285 467 aa4.38□□□□□ -1.71
VFA1YER128W YLR224WQ05947 369 aa4.38□□□□□ -1.71
VFA1YER128W ROD1Q02805 837 aa4.37□□□□□ -1.71
VFA1YER128W PMA1P05030 918 aaKnown RBP4.36□□□□□ -1.71
VFA1YER128W RAD53P22216 821 aa4.36□□□□□ -1.71
VFA1YER128W EMC1P25574 760 aa4.36□□□□□ -1.71
VFA1YER128W MKK2P32491 506 aa4.36□□□□□ -1.71
VFA1YER128W RPT1P33299 467 aaKnown RBP4.36□□□□□ -1.71
VFA1YER128W RGD1P38339 666 aa4.36□□□□□ -1.71
VFA1YER128W THI12P42883 340 aa4.36□□□□□ -1.71
VFA1YER128W THI5P43534 340 aa4.36□□□□□ -1.71
VFA1YER128W THI11P47183 340 aa4.36□□□□□ -1.71
VFA1YER128W GCV2P49095 1034 aa4.36□□□□□ -1.71
VFA1YER128W SIZ1Q04195 904 aa4.36□□□□□ -1.71
VFA1YER128W THI13Q07748 340 aa4.36□□□□□ -1.71
VFA1YER128W HMI1Q12039 706 aa4.36□□□□□ -1.71
VFA1YER128W YER152CP10356 443 aa4.35□□□□□ -1.71
VFA1YER128W CHS7P38843 316 aa4.35□□□□□ -1.71
VFA1YER128W SNU71P53207 620 aaKnown RBP4.35□□□□□ -1.71
VFA1YER128W SIW14P53965 281 aa4.35□□□□□ -1.71
VFA1YER128W YML122CQ03207 126 aa4.35□□□□□ -1.71
VFA1YER128W NOP12Q08208 459 aaKnown RBP4.35□□□□□ -1.71
VFA1YER128W DCG1P32460 244 aa4.34□□□□□ -1.71
VFA1YER128W ENT3P47160 408 aa4.34□□□□□ -1.71
VFA1YER128W KIN4Q01919 800 aa4.34□□□□□ -1.71
VFA1YER128W MCD1Q12158 566 aa4.34□□□□□ -1.71
VFA1YER128W PRE9P23638 258 aaKnown RBP4.33□□□□□ -1.72
VFA1YER128W MLS1P30952 554 aa4.33□□□□□ -1.72
VFA1YER128W STM1P39015 273 aaKnown RBP4.33□□□□□ -1.72
VFA1YER128W MRPS18P42847 217 aa4.33□□□□□ -1.72
VFA1YER128W MSC2Q03455 724 aa4.33□□□□□ -1.72
VFA1YER128W ATG13Q06628 738 aa4.33□□□□□ -1.72
VFA1YER128W MSC6Q08818 692 aaKnown RBP4.33□□□□□ -1.72
VFA1YER128W WHI5Q12416 295 aa4.33□□□□□ -1.72
VFA1YER128W SYP1P25623 870 aaKnown RBP4.32□□□□□ -1.72
VFA1YER128W MSS4P38994 779 aa4.32□□□□□ -1.72
VFA1YER128W TCB2P48231 1178 aa4.32□□□□□ -1.72
VFA1YER128W BAS1P22035 811 aa4.31□□□□□ -1.72
VFA1YER128W SEC8P32855 1065 aa4.31□□□□□ -1.72
VFA1YER128W SSF1P38789 453 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms