RNA–Protein interactions for RNA: YEL012W

UBC8, Transcript of Ubiquitin-conjugating enzyme that regulates gluconeogenesis, yeast

Gene UBC8, Length 657 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC8	YEL012W	NCL1	P38205	684 aa	Known RBP	5.5	□□□□□ -1.53
UBC8	YEL012W	PIC2	P40035	300 aa		5.5	□□□□□ -1.53
UBC8	YEL012W	YIL089W	P40500	205 aa		5.5	□□□□□ -1.53
UBC8	YEL012W	FET4	P40988	552 aa		5.5	□□□□□ -1.53
UBC8	YEL012W	YPR117W	Q06116	2489 aa		5.5	□□□□□ -1.53
UBC8	YEL012W	TAO3	P40468	2376 aa		5.49	□□□□□ -1.53
UBC8	YEL012W	YIR007W	P40566	764 aa		5.49	□□□□□ -1.53
UBC8	YEL012W	ROG3	P43602	733 aa		5.49	□□□□□ -1.53
UBC8	YEL012W	PPT1	P53043	513 aa		5.49	□□□□□ -1.53
UBC8	YEL012W	ALD6	P54115	500 aa	Known RBP	5.49	□□□□□ -1.53
UBC8	YEL012W	ULP1	Q02724	621 aa		5.49	□□□□□ -1.53
UBC8	YEL012W	RAT1	Q02792	1006 aa	Known RBP	5.49	□□□□□ -1.53
UBC8	YEL012W	TY1A-MR1	Q04215	440 aa		5.49	□□□□□ -1.53
UBC8	YEL012W	CMR1	Q12510	522 aa	Known RBP	5.49	□□□□□ -1.53
UBC8	YEL012W	DIT1	P21623	536 aa		5.48	□□□□□ -1.53
UBC8	YEL012W	AKL1	P38080	1108 aa	Known RBP	5.48	□□□□□ -1.53
UBC8	YEL012W	YFR016C	P43597	1233 aa	Known RBP	5.48	□□□□□ -1.53
UBC8	YEL012W	PAP2	P53632	584 aa	Known RBP	5.48	□□□□□ -1.53
UBC8	YEL012W	CUZ1	P53899	274 aa		5.48	□□□□□ -1.53
UBC8	YEL012W	ADI1	Q03677	179 aa		5.48	□□□□□ -1.53
UBC8	YEL012W	MTC5	Q03897	1148 aa		5.48	□□□□□ -1.53
UBC8	YEL012W	MCD1	Q12158	566 aa		5.48	□□□□□ -1.53
UBC8	YEL012W	MRP10	O75012	95 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	HVG1	P0CE11	249 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	DUT1	P33317	147 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	PET112	P33893	541 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	MNR2	P35724	969 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	TFA2	P36145	328 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	AMN1	P38285	549 aa	Predicted RBP	5.47	□□□□□ -1.53
UBC8	YEL012W	VAC8	P39968	578 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	MRPS18	P42847	217 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	VPS4	P52917	437 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	UBP16	Q02863	499 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	HEH2	Q03281	663 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	AOS1	Q06624	347 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	PHM7	Q12252	991 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	GLO4	Q12320	285 aa		5.47	□□□□□ -1.53
UBC8	YEL012W	HKR1	P41809	1802 aa		5.46	□□□□□ -1.53
UBC8	YEL012W	FUS1	P11710	512 aa		5.46	□□□□□ -1.54
UBC8	YEL012W	FRD1	P32614	470 aa	Known RBP	5.46	□□□□□ -1.54
UBC8	YEL012W	APL2	P36000	726 aa	Predicted RBP	5.46	□□□□□ -1.54
UBC8	YEL012W	STV1	P37296	890 aa		5.46	□□□□□ -1.54
UBC8	YEL012W	PRK1	P40494	810 aa		5.46	□□□□□ -1.54
UBC8	YEL012W	MAD1	P40957	749 aa		5.46	□□□□□ -1.54
UBC8	YEL012W	NNF1	P47149	201 aa		5.46	□□□□□ -1.54
UBC8	YEL012W	YGR035C	P53222	116 aa		5.46	□□□□□ -1.54
UBC8	YEL012W	YAF9	P53930	226 aa		5.46	□□□□□ -1.54
UBC8	YEL012W	CTF4	Q01454	927 aa		5.46	□□□□□ -1.54
UBC8	YEL012W	YMR265C	Q03508	461 aa	Known RBP	5.46	□□□□□ -1.54
UBC8	YEL012W	TY1A-DR2	Q03964	440 aa	Known RBP	5.46	□□□□□ -1.54
UBC8	YEL012W	GRX6	Q12438	231 aa		5.46	□□□□□ -1.54
UBC8	YEL012W	NPR1	P22211	790 aa		5.45	□□□□□ -1.54
UBC8	YEL012W	KCC4	P25389	1037 aa		5.45	□□□□□ -1.54
UBC8	YEL012W	ECM2	P38241	364 aa	Known RBP	5.45	□□□□□ -1.54
UBC8	YEL012W	RVS167	P39743	482 aa	Known RBP	5.45	□□□□□ -1.54
UBC8	YEL012W	TRM44	Q02648	567 aa	Known RBP	5.45	□□□□□ -1.54
UBC8	YEL012W	PMT7	Q06644	662 aa		5.45	□□□□□ -1.54
UBC8	YEL012W	YDR461C-A	Q2V2P7	80 aa		5.45	□□□□□ -1.54
UBC8	YEL012W	RPP1A	P05318	106 aa	Predicted RBP	5.44	□□□□□ -1.54
UBC8	YEL012W	CDC34	P14682	295 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	CLN2	P20438	545 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	MSM1	P22438	575 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	TRK2	P28584	889 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	MAC1	P35192	417 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	INP51	P40559	946 aa	Known RBP	5.44	□□□□□ -1.54
UBC8	YEL012W	GNP1	P48813	663 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	BIO5	P53744	561 aa	Known RBP	5.44	□□□□□ -1.54
UBC8	YEL012W	MDG1	P53885	366 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	KRE33	P53914	1056 aa	Known RBP	5.44	□□□□□ -1.54
UBC8	YEL012W	TIM50	Q02776	476 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	RSC2	Q06488	889 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	GAS5	Q08193	484 aa		5.44	□□□□□ -1.54
UBC8	YEL012W	HEM13	P11353	328 aa	Known RBP	5.43	□□□□□ -1.54
UBC8	YEL012W	SCT1	P32784	759 aa		5.43	□□□□□ -1.54
UBC8	YEL012W	PNT1	P38969	423 aa		5.43	□□□□□ -1.54
UBC8	YEL012W	PEA2	P40091	420 aa		5.43	□□□□□ -1.54
UBC8	YEL012W	PDS5	Q04264	1277 aa		5.43	□□□□□ -1.54
UBC8	YEL012W	HPF1	Q05164	967 aa		5.43	□□□□□ -1.54
UBC8	YEL012W	SYT1	Q06836	1226 aa		5.43	□□□□□ -1.54
UBC8	YEL012W	SSF2	Q12153	453 aa	Predicted RBP	5.43	□□□□□ -1.54
UBC8	YEL012W	RPS9B	P05755	195 aa	Known RBP	5.42	□□□□□ -1.54
UBC8	YEL012W	GCR1	P07261	785 aa		5.42	□□□□□ -1.54
UBC8	YEL012W	FPS1	P23900	669 aa		5.42	□□□□□ -1.54
UBC8	YEL012W	FAA4	P47912	694 aa	Known RBP	5.42	□□□□□ -1.54
UBC8	YEL012W	LYS5	P50113	272 aa		5.42	□□□□□ -1.54
UBC8	YEL012W	ZDS2	P54786	942 aa		5.42	□□□□□ -1.54
UBC8	YEL012W	NOG1	Q02892	647 aa	Known RBP	5.42	□□□□□ -1.54
UBC8	YEL012W	SSP2	Q08646	371 aa		5.42	□□□□□ -1.54
UBC8	YEL012W	SOG2	Q08817	791 aa		5.42	□□□□□ -1.54
UBC8	YEL012W	SEC23	P15303	768 aa	Known RBP	5.41	□□□□□ -1.54
UBC8	YEL012W	HPR1	P17629	752 aa	Known RBP	5.41	□□□□□ -1.54
UBC8	YEL012W	PEX28	P38848	579 aa		5.41	□□□□□ -1.54
UBC8	YEL012W	YJR124C	P47159	448 aa		5.41	□□□□□ -1.54
UBC8	YEL012W	YGL140C	P53120	1219 aa		5.41	□□□□□ -1.54
UBC8	YEL012W	YGR117C	P53270	476 aa		5.41	□□□□□ -1.54
UBC8	YEL012W	ADE12	P80210	433 aa	Known RBP	5.41	□□□□□ -1.54
UBC8	YEL012W	VPS64	Q03944	604 aa		5.41	□□□□□ -1.54
UBC8	YEL012W	DIB1	Q06819	143 aa	Predicted RBP	5.41	□□□□□ -1.54
UBC8	YEL012W	AIM44	Q99299	758 aa		5.41	□□□□□ -1.54
UBC8	YEL012W	AFG2	P32794	780 aa		5.4	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 32.1 ms