RNA–Protein interactions for RNA: YCR088W

ABP1, Transcript of Actin-binding protein of the cortical actin cytoskeleton, yeastyeast

Gene ABP1, Length 1,779 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABP1YCR088W SOV1Q04748 898 aa8.74□□□□□ -1.01
ABP1YCR088W ADY4Q05955 493 aa8.74□□□□□ -1.01
ABP1YCR088W YOR223WQ12015 292 aa8.74□□□□□ -1.01
ABP1YCR088W RMP1Q12530 201 aa8.74□□□□□ -1.01
ABP1YCR088W YKL091CP33324 310 aaKnown RBP8.73□□□□□ -1.01
ABP1YCR088W LYS4P49367 693 aaPredicted RBP8.73□□□□□ -1.01
ABP1YCR088W UTP5Q04177 643 aaKnown RBP8.73□□□□□ -1.01
ABP1YCR088W SPO75Q07798 868 aa8.73□□□□□ -1.01
ABP1YCR088W MAK11P20484 414 aaKnown RBP8.73□□□□□ -1.01
ABP1YCR088W RAD53P22216 821 aa8.73□□□□□ -1.01
ABP1YCR088W YAP5P40574 245 aa8.73□□□□□ -1.01
ABP1YCR088W THI6P41835 540 aa8.73□□□□□ -1.01
ABP1YCR088W SET4P42948 560 aa8.73□□□□□ -1.01
ABP1YCR088W VTC2P43585 828 aa8.73□□□□□ -1.01
ABP1YCR088W JJJ2P46997 583 aa8.73□□□□□ -1.01
ABP1YCR088W UTP22P53254 1237 aaPredicted RBP8.73□□□□□ -1.01
ABP1YCR088W SLK19Q08581 821 aaKnown RBP8.73□□□□□ -1.01
ABP1YCR088W DSE3Q08729 430 aa8.73□□□□□ -1.01
ABP1YCR088W TUP1P16649 713 aa8.72□□□□□ -1.01
ABP1YCR088W RPL8BP29453 256 aaKnown RBP8.72□□□□□ -1.01
ABP1YCR088W VPS8P39702 1274 aa8.72□□□□□ -1.01
ABP1YCR088W ATG32P40458 529 aa8.72□□□□□ -1.01
ABP1YCR088W CIT3P43635 486 aa8.72□□□□□ -1.01
ABP1YCR088W CCM1P48237 864 aaPredicted RBP8.72□□□□□ -1.01
ABP1YCR088W TAD1P53065 400 aa8.72□□□□□ -1.01
ABP1YCR088W RET3P53600 189 aa8.72□□□□□ -1.01
ABP1YCR088W OMS1Q06668 471 aa8.72□□□□□ -1.01
ABP1YCR088W WRS1Q12109 432 aaKnown RBP8.72□□□□□ -1.01
ABP1YCR088W SRB4P32569 687 aa8.71□□□□□ -1.01
ABP1YCR088W SLD2P34252 453 aa8.71□□□□□ -1.01
ABP1YCR088W BYE1P36106 594 aa8.71□□□□□ -1.01
ABP1YCR088W RAD1P06777 1100 aa8.71□□□□□ -1.02
ABP1YCR088W NUC1P08466 329 aa8.71□□□□□ -1.02
ABP1YCR088W MIP1P15801 1254 aa8.71□□□□□ -1.02
ABP1YCR088W UGA2P38067 497 aa8.71□□□□□ -1.02
ABP1YCR088W ASE1P50275 885 aa8.71□□□□□ -1.02
ABP1YCR088W MDM1Q01846 1127 aa8.71□□□□□ -1.02
ABP1YCR088W FOB1O13329 566 aa8.7□□□□□ -1.02
ABP1YCR088W OM45P16547 393 aa8.7□□□□□ -1.02
ABP1YCR088W CKI1P20485 582 aa8.7□□□□□ -1.02
ABP1YCR088W ISY1P21374 235 aaPredicted RBP8.7□□□□□ -1.02
ABP1YCR088W DAL7P21826 554 aa8.7□□□□□ -1.02
ABP1YCR088W SET5P38890 526 aaKnown RBP8.7□□□□□ -1.02
ABP1YCR088W GSM1P42950 618 aa8.7□□□□□ -1.02
ABP1YCR088W NOP6Q07623 225 aaKnown RBP8.7□□□□□ -1.02
ABP1YCR088W SIL1Q08199 421 aa8.7□□□□□ -1.02
ABP1YCR088W KEL3Q08979 651 aaPredicted RBP8.7□□□□□ -1.02
ABP1YCR088W NUR1Q12066 484 aa8.7□□□□□ -1.02
ABP1YCR088W TOS1P38288 455 aa8.69□□□□□ -1.02
ABP1YCR088W TOM71P38825 639 aaKnown RBP8.69□□□□□ -1.02
ABP1YCR088W YJR079WP47126 109 aa8.69□□□□□ -1.02
ABP1YCR088W DSE4P53753 1117 aa8.69□□□□□ -1.02
ABP1YCR088W IRC3Q06683 689 aa8.69□□□□□ -1.02
ABP1YCR088W CHS3P29465 1165 aa8.68□□□□□ -1.02
ABP1YCR088W HXT1P32465 570 aa8.68□□□□□ -1.02
ABP1YCR088W CNS1P33313 385 aa8.68□□□□□ -1.02
ABP1YCR088W KIC1P38692 1080 aa8.68□□□□□ -1.02
ABP1YCR088W CCT3P39077 534 aaKnown RBP8.68□□□□□ -1.02
ABP1YCR088W HPC2Q01448 625 aa8.68□□□□□ -1.02
ABP1YCR088W VPS30Q02948 557 aa8.68□□□□□ -1.02
ABP1YCR088W RUD3Q12234 484 aaKnown RBP8.68□□□□□ -1.02
ABP1YCR088W YEL076C-AP0CX16 216 aa8.68□□□□□ -1.02
ABP1YCR088W YLR464WP0CX17 216 aa8.68□□□□□ -1.02
ABP1YCR088W GFA1P14742 717 aaKnown RBP8.68□□□□□ -1.02
ABP1YCR088W UBP5P39944 805 aa8.68□□□□□ -1.02
ABP1YCR088W YEL076CP39971 216 aa8.68□□□□□ -1.02
ABP1YCR088W RSM7P47150 247 aa8.68□□□□□ -1.02
ABP1YCR088W YNL035CP53962 389 aaKnown RBP8.68□□□□□ -1.02
ABP1YCR088W VTC3Q02725 835 aa8.68□□□□□ -1.02
ABP1YCR088W YMR114CQ04471 368 aaKnown RBP8.68□□□□□ -1.02
ABP1YCR088W POB3Q04636 552 aaKnown RBP8.68□□□□□ -1.02
ABP1YCR088W GSC2P40989 1895 aa8.67□□□□□ -1.02
ABP1YCR088W SIT4P20604 311 aa8.67□□□□□ -1.02
ABP1YCR088W RET1P22276 1149 aaKnown RBP8.67□□□□□ -1.02
ABP1YCR088W XRS2P33301 854 aa8.67□□□□□ -1.02
ABP1YCR088W BDF1P35817 686 aa8.67□□□□□ -1.02
ABP1YCR088W YMR124WP39523 943 aaKnown RBP8.67□□□□□ -1.02
ABP1YCR088W TOS3P43637 560 aa8.67□□□□□ -1.02
ABP1YCR088W APL6P46682 809 aa8.67□□□□□ -1.02
ABP1YCR088W FOL1P53848 824 aa8.67□□□□□ -1.02
ABP1YCR088W CBK1P53894 756 aa8.67□□□□□ -1.02
ABP1YCR088W SDH5Q08230 162 aa8.67□□□□□ -1.02
ABP1YCR088W TOP1P04786 769 aa8.66□□□□□ -1.02
ABP1YCR088W ARG82P07250 355 aa8.66□□□□□ -1.02
ABP1YCR088W ORC6P38826 435 aa8.66□□□□□ -1.02
ABP1YCR088W BIM1P40013 344 aa8.66□□□□□ -1.02
ABP1YCR088W DSN1P40568 576 aa8.66□□□□□ -1.02
ABP1YCR088W YFR006WP43590 535 aa8.66□□□□□ -1.02
ABP1YCR088W BNI5P53890 448 aaKnown RBP8.66□□□□□ -1.02
ABP1YCR088W URH1Q04179 340 aa8.66□□□□□ -1.02
ABP1YCR088W AIM33Q04516 312 aa8.66□□□□□ -1.02
ABP1YCR088W GAS5Q08193 484 aa8.66□□□□□ -1.02
ABP1YCR088W YPL225WQ08971 146 aaKnown RBP8.66□□□□□ -1.02
ABP1YCR088W PSF3Q12146 194 aa8.66□□□□□ -1.02
ABP1YCR088W CDC8P00572 216 aa8.66□□□□□ -1.02
ABP1YCR088W RPC53P25441 422 aa8.66□□□□□ -1.02
ABP1YCR088W NFU1P32860 256 aa8.66□□□□□ -1.02
ABP1YCR088W MCD4P36051 919 aa8.66□□□□□ -1.02
ABP1YCR088W PPS1P38148 807 aa8.66□□□□□ -1.02
ABP1YCR088W PUS6P53294 404 aa8.66□□□□□ -1.02
Retrieved 100 of 5,963 RNA–protein pairs in 80.4 ms