RNA–Protein interactions for RNA: YBR275C

RIF1, Transcript of Protein that binds to the Rap1p C-terminus, yeastyeast

Gene RIF1, Length 5,751 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIF1YBR275C LRE1P25579 583 aaKnown RBP3.14□□□□□ -1.91
RIF1YBR275C FRE1P32791 686 aa3.14□□□□□ -1.91
RIF1YBR275C MIA40P36046 403 aa3.14□□□□□ -1.91
RIF1YBR275C RPC37P36121 282 aa3.14□□□□□ -1.91
RIF1YBR275C RTT107P38850 1070 aa3.14□□□□□ -1.91
RIF1YBR275C ESL1P40456 1118 aa3.14□□□□□ -1.91
RIF1YBR275C MDR1P53258 950 aa3.14□□□□□ -1.91
RIF1YBR275C APP1P53933 587 aa3.14□□□□□ -1.91
RIF1YBR275C MMR1Q06324 491 aa3.14□□□□□ -1.91
RIF1YBR275C PMA1P05030 918 aaKnown RBP3.14□□□□□ -1.91
RIF1YBR275C CBS2P14905 389 aa3.14□□□□□ -1.91
RIF1YBR275C PWP1P21304 576 aaKnown RBP3.14□□□□□ -1.91
RIF1YBR275C MIH1P23748 554 aa3.14□□□□□ -1.91
RIF1YBR275C NDI1P32340 513 aa3.14□□□□□ -1.91
RIF1YBR275C PIN4P34217 668 aaKnown RBP RIP-Chip data3.14□□□□□ -1.91not detected
RIF1YBR275C YKL100CP34248 587 aa3.14□□□□□ -1.91
RIF1YBR275C FTR1P40088 404 aa3.14□□□□□ -1.91
RIF1YBR275C PFD1P46988 109 aa3.14□□□□□ -1.91
RIF1YBR275C YGL082WP53155 381 aa3.14□□□□□ -1.91
RIF1YBR275C IRC4Q03036 179 aa3.14□□□□□ -1.91
RIF1YBR275C TIF35Q04067 274 aaKnown RBP3.14□□□□□ -1.91
RIF1YBR275C MFB1Q04922 465 aa3.14□□□□□ -1.91
RIF1YBR275C SPP382Q06411 708 aaPredicted RBP3.14□□□□□ -1.91
RIF1YBR275C UTP4Q06679 776 aaKnown RBP3.14□□□□□ -1.91
RIF1YBR275C SPC110P32380 944 aa3.13□□□□□ -1.91
RIF1YBR275C DPH2P32461 534 aa3.13□□□□□ -1.91
RIF1YBR275C NUF2P33895 451 aa3.13□□□□□ -1.91
RIF1YBR275C UBP13P38187 747 aa3.13□□□□□ -1.91
RIF1YBR275C SRP68P38687 599 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C SEC28P40509 296 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C GYP8P43570 497 aa3.13□□□□□ -1.91
RIF1YBR275C CPR8P53728 308 aa3.13□□□□□ -1.91
RIF1YBR275C YNL260CP53846 198 aa3.13□□□□□ -1.91
RIF1YBR275C CDC55Q00362 526 aa3.13□□□□□ -1.91
RIF1YBR275C CAB1Q04430 367 aa3.13□□□□□ -1.91
RIF1YBR275C COX17Q12287 69 aa3.13□□□□□ -1.91
RIF1YBR275C LDB19Q12502 818 aa3.13□□□□□ -1.91
RIF1YBR275C RTC1Q08281 1341 aa3.13□□□□□ -1.91
RIF1YBR275C RPL8AP17076 256 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C CNA1P23287 553 aa3.13□□□□□ -1.91
RIF1YBR275C TFA2P36145 328 aa3.13□□□□□ -1.91
RIF1YBR275C MED6P38782 295 aa3.13□□□□□ -1.91
RIF1YBR275C YIR014WP40570 242 aa3.13□□□□□ -1.91
RIF1YBR275C RTC4P53850 401 aa3.13□□□□□ -1.91
RIF1YBR275C ELA1P53861 379 aaPredicted RBP3.13□□□□□ -1.91
RIF1YBR275C OPI10Q08202 246 aa3.13□□□□□ -1.91
RIF1YBR275C APL5Q08951 932 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C SGT2Q12118 346 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C MIS1P09440 975 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C KIN1P13185 1064 aa3.13□□□□□ -1.91
RIF1YBR275C DBP3P20447 523 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C PKC1P24583 1151 aa3.13□□□□□ -1.91
RIF1YBR275C RTG2P32608 588 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C YDL186WP48568 277 aa3.13□□□□□ -1.91
RIF1YBR275C FAR11P53917 953 aa3.13□□□□□ -1.91
RIF1YBR275C SYH1Q02875 849 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C RBA50Q04418 439 aa3.13□□□□□ -1.91
RIF1YBR275C BNA5Q05979 453 aa3.13□□□□□ -1.91
RIF1YBR275C SFG1Q12507 346 aa3.13□□□□□ -1.91
RIF1YBR275C NUP145P49687 1317 aa3.13□□□□□ -1.91
RIF1YBR275C RGP1P16664 663 aa3.13□□□□□ -1.91
RIF1YBR275C BRF1P29056 596 aa3.13□□□□□ -1.91
RIF1YBR275C LHS1P36016 881 aa3.13□□□□□ -1.91
RIF1YBR275C CCL1P37366 393 aa3.13□□□□□ -1.91
RIF1YBR275C CTM1P38818 585 aa3.13□□□□□ -1.91
RIF1YBR275C SAP1P39955 897 aaKnown RBP3.13□□□□□ -1.91
RIF1YBR275C MGS1P40151 587 aa3.13□□□□□ -1.91
RIF1YBR275C SRL4Q03085 281 aa3.13□□□□□ -1.91
RIF1YBR275C RRP36Q12481 300 aaPredicted RBP3.13□□□□□ -1.91
RIF1YBR275C ADE3P07245 946 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C SGF29P25554 259 aa3.12□□□□□ -1.91
RIF1YBR275C SCD5P34758 872 aa3.12□□□□□ -1.91
RIF1YBR275C SNU114P36048 1008 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C HOS4P40480 1083 aa3.12□□□□□ -1.91
RIF1YBR275C NOP15P53927 220 aaPredicted RBP3.12□□□□□ -1.91
RIF1YBR275C FRA1Q07825 749 aa3.12□□□□□ -1.91
RIF1YBR275C CAF20P12962 161 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C PIM1P36775 1133 aa3.12□□□□□ -1.91
RIF1YBR275C YGR266WP53326 701 aa3.12□□□□□ -1.91
RIF1YBR275C MKC7P53379 596 aa3.12□□□□□ -1.91
RIF1YBR275C MTD1Q02046 320 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C GAD1Q04792 585 aa3.12□□□□□ -1.91
RIF1YBR275C ATG38Q05789 226 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C PEX15Q08215 383 aa3.12□□□□□ -1.91
RIF1YBR275C MDM20Q12387 796 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C SRF1Q12516 437 aa3.12□□□□□ -1.91
RIF1YBR275C YKL033W-AQ86ZR7 236 aa3.12□□□□□ -1.91
RIF1YBR275C GFA1P14742 717 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C PAT1P25644 796 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C RPL8BP29453 256 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C GCD6P32501 712 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C EMW1P42842 904 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C ZDS1P50111 915 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C FMS1P50264 508 aa3.12□□□□□ -1.91
RIF1YBR275C SXM1Q04175 944 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C SSK22P25390 1331 aaPredicted RBP3.12□□□□□ -1.91
RIF1YBR275C RDS2P19541 446 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C RET1P22276 1149 aaKnown RBP3.12□□□□□ -1.91
RIF1YBR275C GRX4P32642 244 aa3.12□□□□□ -1.91
RIF1YBR275C TSC10P38342 320 aa3.12□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 43 ms