RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Gimap6Q8K349 305 aa15.7■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Cyp2d11P24457 504 aa15.69■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Atp8b2P98199 1209 aa15.69■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Gtf3c3Q3TMP1 882 aa15.69■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Cnksr1A2A9K7 700 aa15.69■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Srgap3Q812A2 1099 aa15.69■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Amotl2Q8K371 772 aa15.69■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Ppp1r42Q8R1Z4 357 aa15.69■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Nphp1Q9QY53 687 aa15.69■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Mcm4P49717 862 aa15.68■□□□□ 0.1
Rnf4-201ENSMUST00000030992 CoilQ5SU73 570 aa15.68■□□□□ 0.1
Rnf4-201ENSMUST00000030992 TimelessQ9R1X4 1197 aa15.68■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Wdr17E9Q271 1322 aa15.67■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Kcnh5Q920E3 988 aa15.67■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Cc2d1aQ8K1A6 943 aa15.67■□□□□ 0.1
Rnf4-201ENSMUST00000030992 TatQ8QZR1 454 aa15.67■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Bcar3Q9QZK2 820 aa15.67■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Eif4a1P60843 406 aaKnown RBP15.66■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Fyb1O35601 819 aa15.65■□□□□ 0.1
Rnf4-201ENSMUST00000030992 MyclP10166 368 aa15.65■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Aox2Q5SGK3 1345 aa15.65■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Ppp1r37Q8BKR5 712 aa15.65■□□□□ 0.1
Rnf4-201ENSMUST00000030992 4933402E13RikQ9D4D2 429 aa15.65■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Dnajc10Q9DC23 793 aa15.65■□□□□ 0.1
Rnf4-201ENSMUST00000030992 Mcmdc2E9Q956 681 aa15.64■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Zkscan2G3X952 960 aa15.64■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Nkx2-3P97334 362 aa15.64■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Erc2Q6PH08 957 aa15.64■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Q9D2X8 372 aa15.64■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Dmrtc1Q9D9R7 182 aa15.64■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Wnk3Q80XP9 1757 aa15.64■□□□□ 0.09
Rnf4-201ENSMUST00000030992 RestQ8VIG1 1082 aa15.64■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Col1a2Q01149 1372 aa15.63■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Nrxn3Q6P9K9 1571 aa15.63■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Hoxa7P02830 229 aa15.63■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Atg3Q9CPX6 314 aa15.63■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Nol8Q3UHX0 1147 aaKnown RBP15.63■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Cwc27Q3TKY6 469 aa15.62■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Ptpdc1Q6NZK8 747 aa15.62■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Mrps27Q8BK72 415 aaKnown RBP15.62■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Fmnl2A2APV2 1086 aa15.62■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Casq1O09165 405 aa15.62■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Arhgef1Q61210 920 aaKnown RBP15.62■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Cyp27a1Q9DBG1 533 aa15.62■□□□□ 0.09
Rnf4-201ENSMUST00000030992 TnrQ8BYI9 1358 aa15.61■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Phlpp1Q8CHE4 1687 aa15.61■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Tnnt1O88346 262 aa15.61■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Bend3Q6PAL0 825 aa15.6■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Prune1Q8BIW1 454 aa15.6■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Adcy9P51830 1353 aa15.6■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Zkscan16A2ALW2 728 aa15.6■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Spryd3E9Q9B3 442 aa15.6■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Ier5O89113 308 aa15.6■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Noc3lQ8VI84 807 aaKnown RBP15.6■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Echdc1Q9D9V3 322 aa15.6■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Atp10bB1AWN4 1474 aa15.59■□□□□ 0.09
Rnf4-201ENSMUST00000030992 PrkcshO08795 521 aa15.59■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Simc1E9Q6E9 1354 aa15.59■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Plcb2A3KGF7 1181 aa15.59■□□□□ 0.09
Rnf4-201ENSMUST00000030992 CalcaP70160 136 aa15.58■□□□□ 0.09
Rnf4-201ENSMUST00000030992 Btbd11Q6GQW0 1109 aa15.58■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Hmox1P14901 289 aa15.58■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Bloc1s4Q8VED2 215 aa15.58■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Col15a1O35206 1367 aa15.57■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Stk11ipQ3TAA7 1072 aa15.57■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Zkscan1Q8BGS3 561 aaKnown RBP15.57■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Tmem119Q8R138 280 aa15.57■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Tpx2A2APB8 745 aaKnown RBP15.56■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Tlr7P58681 1050 aa15.56■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Slain2Q8CI08 581 aa15.56■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Bag4Q8CI61 457 aa15.56■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Flt4P35917 1363 aa15.56■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Zap70P43404 618 aa15.55■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Isy1Q69ZQ2 285 aaKnown RBP15.55■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Col18a1P39061 1774 aa15.55■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Kcna6Q61923 529 aa15.54■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Pcdh10E9PXQ7 1057 aa15.54■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Vwa3bJ9JI28 736 aa15.54■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Fkbp4P30416 458 aa15.54■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Anapc15P60007 132 aa15.54■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Unc5clQ6R653 518 aa15.54■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Dzip1Q8BMD2 852 aa15.54■□□□□ 0.08
Rnf4-201ENSMUST00000030992 LlphQ9D945 130 aaKnown RBP15.54■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Tnks1bp1P58871 1720 aa15.53■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Exoc6bA6H5Z3 810 aa15.53■□□□□ 0.08
Rnf4-201ENSMUST00000030992 PsapQ61207 557 aaKnown RBP15.53■□□□□ 0.08
Rnf4-201ENSMUST00000030992 GckrQ91X44 587 aa15.53■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Zdhhc9P59268 364 aa15.52■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Cct4P80315 539 aaKnown RBP15.52■□□□□ 0.08
Rnf4-201ENSMUST00000030992 Il4rP16382 810 aa15.52■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Nol11Q8BJW5 723 aaKnown RBP15.52■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Irx6Q9ER75 438 aa15.51■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Tns2Q8CGB6 1400 aa15.51■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Rasa1E9PYG6 1038 aa15.51■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Farp2Q91VS8 1065 aa15.51■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Dnttip2Q8R2M2 758 aaKnown RBP15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Ubr2Q6WKZ8 1755 aa15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 Ms4a2P20490 235 aa15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 HellsQ60848 821 aa15.5■□□□□ 0.07
Rnf4-201ENSMUST00000030992 AnlnQ8K298 1121 aaKnown RBP15.5■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 49.6 ms