RNA–Protein interactions for RNA: RDN37-2

RDN37-2, 35S ribosomal RNA (35S rRNA) transcript, yeastyeast

Gene RDN37-2, Length 5,354 nt, Biotype rRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RDN37-2RDN37-2 TFA1P36100 482 aa15.42■□□□□ 0.06
RDN37-2RDN37-2 RQC2Q12532 1038 aaKnown RBP15.11■□□□□ 0.01
RDN37-2RDN37-2 TAF7Q05021 590 aa15.09■□□□□ 0.01
RDN37-2RDN37-2 MNN4P36044 1178 aa14.99□□□□□ -0.01
RDN37-2RDN37-2 MTC1P47018 478 aaKnown RBP14.75□□□□□ -0.05
RDN37-2RDN37-2 DRS1P32892 752 aaKnown RBP14.44□□□□□ -0.1
RDN37-2RDN37-2 SAS10Q12136 610 aaPredicted RBP14.35□□□□□ -0.11
RDN37-2RDN37-2 SCT1P32784 759 aa14.2□□□□□ -0.14
RDN37-2RDN37-2 FPR3P38911 411 aaKnown RBP14.2□□□□□ -0.14
RDN37-2RDN37-2 AIM44Q99299 758 aa14.12□□□□□ -0.15
RDN37-2RDN37-2 ASF1P32447 279 aa14□□□□□ -0.17
RDN37-2RDN37-2 PAF1P38351 445 aa13.96□□□□□ -0.17
RDN37-2RDN37-2 POL5P39985 1022 aaKnown RBP13.95□□□□□ -0.18
RDN37-2RDN37-2 NAP1P25293 417 aaKnown RBP13.86□□□□□ -0.19
RDN37-2RDN37-2 IFH1P39520 1085 aa13.85□□□□□ -0.19
RDN37-2RDN37-2 SIS2P36024 562 aa13.84□□□□□ -0.19
RDN37-2RDN37-2 LEU3P08638 886 aa13.83□□□□□ -0.2
RDN37-2RDN37-2 NOP7P53261 605 aaKnown RBP13.83□□□□□ -0.2
RDN37-2RDN37-2 EAF7P53911 425 aaKnown RBP13.82□□□□□ -0.2
RDN37-2RDN37-2 RTT106P40161 455 aa13.76□□□□□ -0.21
RDN37-2RDN37-2 ORC1P54784 914 aaPredicted RBP13.63□□□□□ -0.23
RDN37-2RDN37-2 NOP2P40991 618 aaKnown RBP13.55□□□□□ -0.24
RDN37-2RDN37-2 RNA1P11745 407 aaKnown RBP13.51□□□□□ -0.25
RDN37-2RDN37-2 CAB3P36076 571 aa13.49□□□□□ -0.25
RDN37-2RDN37-2 LEO1P38439 464 aa13.47□□□□□ -0.25
RDN37-2RDN37-2 URN1Q06525 465 aaKnown RBP13.45□□□□□ -0.26
RDN37-2RDN37-2 KRI1P42846 591 aaKnown RBP13.43□□□□□ -0.26
RDN37-2RDN37-2 FUN12P39730 1002 aaKnown RBP13.37□□□□□ -0.27
RDN37-2RDN37-2 JIP3O13555 125 aa13.34□□□□□ -0.27
RDN37-2RDN37-2 COG8Q04632 607 aa13.3□□□□□ -0.28
RDN37-2RDN37-2 QCR6P00127 147 aa13.26□□□□□ -0.29
RDN37-2RDN37-2 NOP8Q08287 484 aaPredicted RBP13.24□□□□□ -0.29
RDN37-2RDN37-2 ENP1P38333 483 aaKnown RBP13.22□□□□□ -0.29
RDN37-2RDN37-2 CKB1P43639 278 aa13.21□□□□□ -0.29
RDN37-2RDN37-2 PAP2P53632 584 aaKnown RBP13.18□□□□□ -0.3
RDN37-2RDN37-2 SPA2P23201 1466 aaKnown RBP13.18□□□□□ -0.3
RDN37-2RDN37-2 ESC2Q06340 456 aa13.15□□□□□ -0.3
RDN37-2RDN37-2 MRX12P47084 519 aa13.03□□□□□ -0.32
RDN37-2RDN37-2 YRB30P53107 440 aaPredicted RBP13□□□□□ -0.33
RDN37-2RDN37-2 BUD21Q08492 214 aaPredicted RBP12.98□□□□□ -0.33
RDN37-2RDN37-2 SVF1Q05515 481 aa12.96□□□□□ -0.33
RDN37-2RDN37-2 YFR016CP43597 1233 aaKnown RBP12.95□□□□□ -0.34
RDN37-2RDN37-2 ENP2P48234 707 aaKnown RBP12.93□□□□□ -0.34
RDN37-2RDN37-2 BFR2Q06631 534 aaKnown RBP12.92□□□□□ -0.34
RDN37-2RDN37-2 YGL081WP53156 320 aa12.85□□□□□ -0.35
RDN37-2RDN37-2 NMD2P38798 1089 aaKnown RBP12.85□□□□□ -0.35
RDN37-2RDN37-2 TPM1P17536 199 aaKnown RBP12.83□□□□□ -0.36
RDN37-2RDN37-2 RAD2P07276 1031 aa12.81□□□□□ -0.36
RDN37-2RDN37-2 SEC3P33332 1336 aaKnown RBP12.8□□□□□ -0.36
RDN37-2RDN37-2 CBF5P33322 483 aaKnown RBP RIP-Chip data12.77□□□□□ -0.37not detected
RDN37-2RDN37-2 YJL181WP46987 611 aa12.74□□□□□ -0.37
RDN37-2RDN37-2 RTF1P53064 558 aa12.74□□□□□ -0.37
RDN37-2RDN37-2 SUP35P05453 685 aaKnown RBP12.74□□□□□ -0.37
RDN37-2RDN37-2 NSR1P27476 414 aaKnown RBP RIP-Chip data12.73□□□□□ -0.37not detected
RDN37-2RDN37-2 BTN2P53286 410 aa12.72□□□□□ -0.37
RDN37-2RDN37-2 EBP2P36049 427 aaKnown RBP12.72□□□□□ -0.37
RDN37-2RDN37-2 SEN54Q02825 467 aaPredicted RBP12.71□□□□□ -0.37
RDN37-2RDN37-2 YPR148CQ06523 435 aa12.71□□□□□ -0.38
RDN37-2RDN37-2 FPR4Q06205 392 aaPredicted RBP12.7□□□□□ -0.38
RDN37-2RDN37-2 TAF2P23255 1407 aa12.7□□□□□ -0.38
RDN37-2RDN37-2 ARP5P53946 755 aa12.69□□□□□ -0.38
RDN37-2RDN37-2 BDP1P46678 594 aa12.66□□□□□ -0.38
RDN37-2RDN37-2 KAR2P16474 682 aaKnown RBP12.66□□□□□ -0.38
RDN37-2RDN37-2 CLB5P30283 435 aa12.66□□□□□ -0.38
RDN37-2RDN37-2 NAB3P38996 802 aaKnown RBP RIP-Chip data12.66□□□□□ -0.38not detected
RDN37-2RDN37-2 PKH1Q03407 766 aa12.66□□□□□ -0.38
RDN37-2RDN37-2 MAK21Q12176 1025 aaKnown RBP12.63□□□□□ -0.39
RDN37-2RDN37-2 RRP8P38961 392 aaKnown RBP12.63□□□□□ -0.39
RDN37-2RDN37-2 SGS1P35187 1447 aa12.63□□□□□ -0.39
RDN37-2RDN37-2 MFT1P33441 392 aaKnown RBP12.62□□□□□ -0.39
RDN37-2RDN37-2 PSH1Q12161 406 aa12.61□□□□□ -0.39
RDN37-2RDN37-2 NCB2Q92317 146 aa12.61□□□□□ -0.39
RDN37-2RDN37-2 HSP82P02829 709 aaKnown RBP12.61□□□□□ -0.39
RDN37-2RDN37-2 TAF5P38129 798 aa12.6□□□□□ -0.39
RDN37-2RDN37-2 PEX14P53112 341 aa12.6□□□□□ -0.39
RDN37-2RDN37-2 RAD26P40352 1085 aa12.59□□□□□ -0.39
RDN37-2RDN37-2 SLD2P34252 453 aa12.58□□□□□ -0.39
RDN37-2RDN37-2 SSA2P10592 639 aaKnown RBP12.58□□□□□ -0.4
RDN37-2RDN37-2 RPC31P17890 251 aa12.58□□□□□ -0.4
RDN37-2RDN37-2 ESF1Q06344 628 aaKnown RBP12.58□□□□□ -0.4
RDN37-2RDN37-2 HUL5P53119 910 aa12.53□□□□□ -0.4
RDN37-2RDN37-2 MIC60P36112 540 aa12.52□□□□□ -0.4
RDN37-2RDN37-2 NST1P53935 1240 aa12.52□□□□□ -0.41
RDN37-2RDN37-2 SMC1P32908 1225 aa12.52□□□□□ -0.41
RDN37-2RDN37-2 KEX1P09620 729 aa12.51□□□□□ -0.41
RDN37-2RDN37-2 GLE1Q12315 538 aa12.51□□□□□ -0.41
RDN37-2RDN37-2 CDC11P32458 415 aa12.49□□□□□ -0.41
RDN37-2RDN37-2 YTA7P40340 1379 aa12.49□□□□□ -0.41
RDN37-2RDN37-2 SPT5P27692 1063 aaKnown RBP12.48□□□□□ -0.41
RDN37-2RDN37-2 INO80P53115 1489 aa12.48□□□□□ -0.41
RDN37-2RDN37-2 YMR124WP39523 943 aaKnown RBP12.48□□□□□ -0.41
RDN37-2RDN37-2 NBL1Q3E7Y6 73 aa12.48□□□□□ -0.41
RDN37-2RDN37-2 SPB4P25808 606 aaPredicted RBP12.47□□□□□ -0.41
RDN37-2RDN37-2 RIX1P38883 763 aaPredicted RBP12.47□□□□□ -0.41
RDN37-2RDN37-2 RSE1Q04693 1361 aaKnown RBP12.47□□□□□ -0.41
RDN37-2RDN37-2 ISW2Q08773 1120 aa12.46□□□□□ -0.41
RDN37-2RDN37-2 ECM16Q04217 1267 aaKnown RBP12.46□□□□□ -0.42
RDN37-2RDN37-2 SQT1P35184 431 aa12.45□□□□□ -0.42
RDN37-2RDN37-2 SKI3P17883 1432 aaKnown RBP12.45□□□□□ -0.42
RDN37-2RDN37-2 RTR1P40084 226 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 5,963 RNA–protein pairs in 13.9 ms