Protein–RNA interactions for Protein: Q9Y587

AP4S1, AP-4 complex subunit sigma-1, humanhuman

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP4S1Q9Y587 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 SP2-202ENST00000613139 908 ntTSL 5 BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
AP4S1Q9Y587 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
AP4S1Q9Y587 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 GNE-204ENST00000539208 2190 ntTSL 2 BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 SLX1B-SULT1A4-201ENST00000344620 2424 ntTSL 2 BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 PCDHA12-202ENST00000613593 2588 ntBASIC17.74■□□□□ 0.43
AP4S1Q9Y587 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
AP4S1Q9Y587 RECK-201ENST00000377966 4888 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 AC012317.2-201ENST00000623305 2251 ntBASIC17.73■□□□□ 0.43
AP4S1Q9Y587 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
AP4S1Q9Y587 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 AC138028.4-201ENST00000564984 1845 ntBASIC17.72■□□□□ 0.43
AP4S1Q9Y587 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
AP4S1Q9Y587 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms