Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
PCDHGB4Q9UN71 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 PRKY-204ENST00000533551 1019 ntBASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 AC018730.2-201ENST00000598623 443 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.21■□□□□ 0.51
PCDHGB4Q9UN71 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGB4Q9UN71 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
PCDHGB4Q9UN71 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 SDHAP1-207ENST00000440850 2000 ntBASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 INO80E-214ENST00000620599 515 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
PCDHGB4Q9UN71 AL031598.1-201ENST00000561511 1773 ntBASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 AC098934.4-201ENST00000564127 592 ntBASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 GAMT-205ENST00000640762 751 ntTSL 5 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 FP475955.4-201ENST00000623131 1990 ntBASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 EML3-212ENST00000494176 2901 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 EML3-216ENST00000529309 2909 ntTSL 2 BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
PCDHGB4Q9UN71 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB4Q9UN71 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC18.18■□□□□ 0.5
PCDHGB4Q9UN71 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
PCDHGB4Q9UN71 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms