Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.02■□□□□ 0.96
PUF60Q9UHX1 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PUF60Q9UHX1 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC21.02■□□□□ 0.96
PUF60Q9UHX1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
PUF60Q9UHX1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
PUF60Q9UHX1 AC104581.1-202ENST00000635932 2618 ntBASIC21.02■□□□□ 0.96
PUF60Q9UHX1 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PUF60Q9UHX1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC21.02■□□□□ 0.95
PUF60Q9UHX1 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
PUF60Q9UHX1 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC21.02■□□□□ 0.95
PUF60Q9UHX1 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.95
PUF60Q9UHX1 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.01■□□□□ 0.95
PUF60Q9UHX1 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PUF60Q9UHX1 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
PUF60Q9UHX1 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PUF60Q9UHX1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
PUF60Q9UHX1 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PUF60Q9UHX1 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC21■□□□□ 0.95
PUF60Q9UHX1 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC21■□□□□ 0.95
PUF60Q9UHX1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC21■□□□□ 0.95
PUF60Q9UHX1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC21■□□□□ 0.95
PUF60Q9UHX1 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC21■□□□□ 0.95
PUF60Q9UHX1 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
PUF60Q9UHX1 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
PUF60Q9UHX1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC21■□□□□ 0.95
PUF60Q9UHX1 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PUF60Q9UHX1 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
PUF60Q9UHX1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
PUF60Q9UHX1 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
PUF60Q9UHX1 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 AC018470.1-201ENST00000624790 3129 ntBASIC20.99■□□□□ 0.95
PUF60Q9UHX1 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 BX664615.1-201ENST00000443558 458 ntBASIC20.99■□□□□ 0.95
PUF60Q9UHX1 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 LINC01238-205ENST00000567549 1107 ntBASIC20.99■□□□□ 0.95
PUF60Q9UHX1 SLC25A1P4-201ENST00000567977 778 ntBASIC20.99■□□□□ 0.95
PUF60Q9UHX1 AC130371.2-201ENST00000619443 611 ntBASIC20.99■□□□□ 0.95
PUF60Q9UHX1 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
PUF60Q9UHX1 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PUF60Q9UHX1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms