Protein–RNA interactions for Protein: Q9NUV7

SPTLC3, Serine palmitoyltransferase 3, humanhuman

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC3Q9NUV7 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 METTL15-202ENST00000403099 795 ntTSL 5 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 MIPEPP3-201ENST00000412105 444 ntBASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 CROCCP5-201ENST00000436658 830 ntBASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SPTLC3Q9NUV7 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 AC135776.1-201ENST00000319817 2481 ntBASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 RAP2CP1-201ENST00000605103 478 ntBASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 CCDC144A-210ENST00000456009 2306 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC20.68■□□□□ 0.9
SPTLC3Q9NUV7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 AC026185.1-201ENST00000445748 174 ntBASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 DNAJA4-210ENST00000489435 947 ntTSL 3 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 OAS3-207ENST00000551007 998 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
SPTLC3Q9NUV7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 AIRN-201ENST00000601203 4374 ntBASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC20.66■□□□□ 0.9
SPTLC3Q9NUV7 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC3Q9NUV7 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC20.65■□□□□ 0.9
SPTLC3Q9NUV7 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
SPTLC3Q9NUV7 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC20.65■□□□□ 0.9
SPTLC3Q9NUV7 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms