Protein–RNA interactions for Protein: Q9NRP4

SDHAF3, Succinate dehydrogenase assembly factor 3, mitochondrial, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAF3Q9NRP4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SDHAF3Q9NRP4 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 GPX4-207ENST00000589115 812 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SDHAF3Q9NRP4 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 AC092338.2-201ENST00000568827 1415 ntBASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 AC007663.1-201ENST00000438948 1240 ntBASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 AC145285.6-201ENST00000604632 637 ntBASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 LINC01023-201ENST00000606054 436 ntBASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SDHAF3Q9NRP4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 AC021087.1-201ENST00000512642 522 ntTSL 2 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 AP003041.3-201ENST00000527151 707 ntBASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.22■□□□□ 0.35
SDHAF3Q9NRP4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.22■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms