Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
SHKBP1Q8TBC3 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 KCNN2-207ENST00000610748 2091 ntTSL 3 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
SHKBP1Q8TBC3 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 KRT18P48-201ENST00000434763 852 ntBASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 HCG4P8-203ENST00000443049 980 ntBASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 RASA4DP-201ENST00000460726 1199 ntBASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 AC022424.1-201ENST00000512155 889 ntTSL 3 BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 KRT126P-201ENST00000549467 1181 ntBASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 CLN6-214ENST00000636314 442 ntTSL 3 BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
SHKBP1Q8TBC3 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 HBZP1-201ENST00000354915 429 ntBASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 CRELD2-204ENST00000407217 1230 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 AC092597.1-201ENST00000487352 616 ntBASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 LINC01785-201ENST00000598042 1112 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 AC024243.1-201ENST00000609234 778 ntBASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC19.7■□□□□ 0.74
SHKBP1Q8TBC3 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 KRT8P3-201ENST00000519669 1449 ntBASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 DUSP5P1-201ENST00000441325 1139 ntBASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 MCCD1P1-208ENST00000445732 328 ntBASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.69■□□□□ 0.74
SHKBP1Q8TBC3 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms