Protein–RNA interactions for Protein: Q8IVD9

NUDCD3, NudC domain-containing protein 3, humanhuman

Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3Q8IVD9 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 AL121829.2-201ENST00000620908 328 ntBASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 AC073111.5-205ENST00000641717 521 ntBASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 AC020916.1-201ENST00000587762 1774 ntBASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.67■□□□□ 0.58
NUDCD3Q8IVD9 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 TREX2-204ENST00000370212 861 ntTSL 5 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 AC022517.1-201ENST00000592429 346 ntBASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 AC120498.8-201ENST00000614275 531 ntBASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
NUDCD3Q8IVD9 ADRA1A-205ENST00000380582 2089 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 TBXA2R-204ENST00000589966 1814 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 GATB-213ENST00000515812 1893 ntTSL 5 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 OAS3-207ENST00000551007 998 ntTSL 2 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 AC092118.2-201ENST00000613495 667 ntBASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NUDCD3Q8IVD9 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NUDCD3Q8IVD9 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.58
NUDCD3Q8IVD9 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.64■□□□□ 0.58
NUDCD3Q8IVD9 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 AC008764.6-201ENST00000595909 2069 ntBASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 HEIH-201ENST00000623091 1652 ntBASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 TSPY23P-201ENST00000440136 739 ntBASIC18.64■□□□□ 0.57
NUDCD3Q8IVD9 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms