Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 AL390719.1-204ENST00000412397 1219 ntBASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 AC020916.1-201ENST00000587762 1774 ntBASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CRLF3Q8IUI8 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.77■□□□□ 0.59
CRLF3Q8IUI8 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
CRLF3Q8IUI8 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.77■□□□□ 0.59
CRLF3Q8IUI8 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CRLF3Q8IUI8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CRLF3Q8IUI8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 RPS2P52-201ENST00000469610 820 ntBASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CRLF3Q8IUI8 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 GCSHP5-201ENST00000443090 522 ntBASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
CRLF3Q8IUI8 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CRLF3Q8IUI8 AL158047.1-201ENST00000445918 881 ntBASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms