Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
RTTNQ86VV8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTTNQ86VV8 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
RTTNQ86VV8 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.58■□□□□ 0.25
RTTNQ86VV8 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.58■□□□□ 0.25
RTTNQ86VV8 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC16.58■□□□□ 0.25
RTTNQ86VV8 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.58■□□□□ 0.25
RTTNQ86VV8 AC145285.6-201ENST00000604632 637 ntBASIC16.58■□□□□ 0.25
RTTNQ86VV8 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC16.58■□□□□ 0.25
RTTNQ86VV8 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTTNQ86VV8 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC16.58■□□□□ 0.25
RTTNQ86VV8 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
RTTNQ86VV8 CROCCP3-202ENST00000420820 1947 ntBASIC16.58■□□□□ 0.25
RTTNQ86VV8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTTNQ86VV8 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTTNQ86VV8 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTTNQ86VV8 AC079598.2-202ENST00000546624 1451 ntBASIC16.58■□□□□ 0.24
RTTNQ86VV8 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTTNQ86VV8 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RTTNQ86VV8 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 AL355355.2-201ENST00000442321 338 ntBASIC16.58■□□□□ 0.24
RTTNQ86VV8 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 CFL2-205ENST00000555765 632 ntTSL 2 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTTNQ86VV8 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC16.58■□□□□ 0.24
RTTNQ86VV8 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
RTTNQ86VV8 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
RTTNQ86VV8 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 AC007613.1-201ENST00000572811 2597 ntBASIC16.57■□□□□ 0.24
RTTNQ86VV8 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 AC130371.2-201ENST00000619443 611 ntBASIC16.57■□□□□ 0.24
RTTNQ86VV8 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 VPS72-207ENST00000640458 689 ntTSL 5 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
RTTNQ86VV8 KRT8P11-201ENST00000409686 1436 ntBASIC16.57■□□□□ 0.24
RTTNQ86VV8 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC16.57■□□□□ 0.24
RTTNQ86VV8 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 AC018445.3-201ENST00000624177 1945 ntBASIC16.56■□□□□ 0.24
RTTNQ86VV8 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.56■□□□□ 0.24
RTTNQ86VV8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
RTTNQ86VV8 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
RTTNQ86VV8 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RTTNQ86VV8 RBM17P1-201ENST00000453646 1190 ntBASIC16.55■□□□□ 0.24
RTTNQ86VV8 DUX4L26-201ENST00000489078 1255 ntBASIC16.55■□□□□ 0.24
RTTNQ86VV8 AP000692.2-201ENST00000608391 879 ntBASIC16.55■□□□□ 0.24
RTTNQ86VV8 AC131212.4-201ENST00000623606 975 ntBASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms