Protein–RNA interactions for Protein: Q6VY07

PACS1, Phosphofurin acidic cluster sorting protein 1, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1Q6VY07 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19■□□□□ 0.63
PACS1Q6VY07 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
PACS1Q6VY07 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19■□□□□ 0.63
PACS1Q6VY07 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PACS1Q6VY07 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PACS1Q6VY07 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC18.99■□□□□ 0.63
PACS1Q6VY07 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 AC008550.1-201ENST00000511500 884 ntBASIC18.98■□□□□ 0.63
PACS1Q6VY07 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 CD177P1-201ENST00000606252 935 ntBASIC18.98■□□□□ 0.63
PACS1Q6VY07 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 AL049637.2-201ENST00000641778 930 ntBASIC18.98■□□□□ 0.63
PACS1Q6VY07 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
PACS1Q6VY07 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PACS1Q6VY07 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 AL354751.1-201ENST00000412768 1863 ntBASIC18.97■□□□□ 0.63
PACS1Q6VY07 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 Z99916.2-201ENST00000604037 246 ntBASIC18.97■□□□□ 0.63
PACS1Q6VY07 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 AC113410.3-201ENST00000623366 203 ntBASIC18.97■□□□□ 0.63
PACS1Q6VY07 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 RCC2P6-201ENST00000526625 1557 ntBASIC18.97■□□□□ 0.63
PACS1Q6VY07 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
PACS1Q6VY07 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PACS1Q6VY07 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PACS1Q6VY07 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PACS1Q6VY07 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms