Protein–RNA interactions for Protein: Q6ICC9

RTL6, Retrotransposon Gag-like protein 6, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL6Q6ICC9 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 SURF4-206ENST00000485435 1206 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 CD320-202ENST00000537716 1119 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 USF2-205ENST00000594064 1179 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 AL121956.5-201ENST00000625261 221 ntBASIC16.95■□□□□ 0.3
RTL6Q6ICC9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RTL6Q6ICC9 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 SCO2-202ENST00000395693 992 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 AL671277.2-201ENST00000458060 996 ntBASIC16.94■□□□□ 0.3
RTL6Q6ICC9 SNX5-210ENST00000481323 562 ntTSL 3 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 AP000550.4-202ENST00000639755 178 ntBASIC16.94■□□□□ 0.3
RTL6Q6ICC9 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC16.94■□□□□ 0.3
RTL6Q6ICC9 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 PCED1CP-201ENST00000419887 785 ntBASIC16.93■□□□□ 0.3
RTL6Q6ICC9 TSPY21P-201ENST00000433481 731 ntBASIC16.93■□□□□ 0.3
RTL6Q6ICC9 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 GCSHP2-201ENST00000560971 527 ntBASIC16.93■□□□□ 0.3
RTL6Q6ICC9 NEK4P2-201ENST00000580004 1012 ntBASIC16.93■□□□□ 0.3
RTL6Q6ICC9 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 DBP-204ENST00000599385 709 ntTSL 3 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC16.93■□□□□ 0.3
RTL6Q6ICC9 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC16.92■□□□□ 0.3
RTL6Q6ICC9 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
RTL6Q6ICC9 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC16.92■□□□□ 0.3
RTL6Q6ICC9 TREX1-205ENST00000625293 1783 ntBASIC16.92■□□□□ 0.3
RTL6Q6ICC9 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC16.92■□□□□ 0.3
RTL6Q6ICC9 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms