Protein–RNA interactions for Protein: P28472

GABRB3, Gamma-aminobutyric acid receptor subunit beta-3, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3P28472 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
GABRB3P28472 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRB3P28472 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GABRB3P28472 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRB3P28472 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRB3P28472 AP000692.2-201ENST00000608391 879 ntBASIC18.68■□□□□ 0.58
GABRB3P28472 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRB3P28472 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC18.68■□□□□ 0.58
GABRB3P28472 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABRB3P28472 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.68■□□□□ 0.58
GABRB3P28472 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GABRB3P28472 SRI-203ENST00000419179 1307 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRB3P28472 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC18.68■□□□□ 0.58
GABRB3P28472 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRB3P28472 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
GABRB3P28472 IFFO1-204ENST00000396840 2677 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
GABRB3P28472 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRB3P28472 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 FDXR-214ENST00000581530 1827 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
GABRB3P28472 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC18.67■□□□□ 0.58
GABRB3P28472 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC18.67■□□□□ 0.58
GABRB3P28472 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRB3P28472 AC142381.4-202ENST00000563973 229 ntBASIC18.67■□□□□ 0.58
GABRB3P28472 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.67■□□□□ 0.58
GABRB3P28472 CD177P1-201ENST00000606252 935 ntBASIC18.67■□□□□ 0.58
GABRB3P28472 AC008622.2-201ENST00000617006 1229 ntBASIC18.67■□□□□ 0.58
GABRB3P28472 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRB3P28472 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRB3P28472 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRB3P28472 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.67■□□□□ 0.58
GABRB3P28472 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GABRB3P28472 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
GABRB3P28472 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRB3P28472 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GABRB3P28472 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRB3P28472 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GABRB3P28472 GCSHP5-201ENST00000443090 522 ntBASIC18.66■□□□□ 0.58
GABRB3P28472 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRB3P28472 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRB3P28472 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC18.66■□□□□ 0.58
GABRB3P28472 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
GABRB3P28472 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 B4GALT4-202ENST00000393765 2459 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 TBC1D3P2-202ENST00000577902 1649 ntBASIC18.66■□□□□ 0.58
GABRB3P28472 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GABRB3P28472 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRB3P28472 FSCN1P1-201ENST00000568912 1481 ntBASIC18.65■□□□□ 0.58
GABRB3P28472 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC18.65■□□□□ 0.58
GABRB3P28472 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRB3P28472 RCC2P3-201ENST00000418112 1537 ntBASIC18.65■□□□□ 0.58
GABRB3P28472 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.65■□□□□ 0.58
GABRB3P28472 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
GABRB3P28472 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABRB3P28472 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.65■□□□□ 0.58
GABRB3P28472 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC18.65■□□□□ 0.58
GABRB3P28472 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.65■□□□□ 0.58
GABRB3P28472 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRB3P28472 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC18.65■□□□□ 0.58
GABRB3P28472 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRB3P28472 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABRB3P28472 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRB3P28472 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GABRB3P28472 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABRB3P28472 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GABRB3P28472 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRB3P28472 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC18.65■□□□□ 0.58
GABRB3P28472 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC18.64■□□□□ 0.58
GABRB3P28472 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.64■□□□□ 0.58
GABRB3P28472 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
GABRB3P28472 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
GABRB3P28472 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
GABRB3P28472 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRB3P28472 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRB3P28472 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
GABRB3P28472 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC18.64■□□□□ 0.57
GABRB3P28472 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
GABRB3P28472 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC18.64■□□□□ 0.57
GABRB3P28472 AC005332.8-201ENST00000622750 2735 ntBASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms