Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD53P19397 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CD53P19397 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC17.08■□□□□ 0.32
CD53P19397 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
CD53P19397 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
CD53P19397 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 AC116351.2-201ENST00000606540 1585 ntBASIC17.07■□□□□ 0.32
CD53P19397 AC018553.1-201ENST00000616682 1458 ntBASIC17.07■□□□□ 0.32
CD53P19397 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
CD53P19397 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.07■□□□□ 0.32
CD53P19397 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.07■□□□□ 0.32
CD53P19397 AP002982.1-201ENST00000492365 877 ntBASIC17.07■□□□□ 0.32
CD53P19397 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.07■□□□□ 0.32
CD53P19397 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC17.07■□□□□ 0.32
CD53P19397 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC17.07■□□□□ 0.32
CD53P19397 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CD53P19397 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 AC020916.1-201ENST00000587762 1774 ntBASIC17.07■□□□□ 0.32
CD53P19397 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CD53P19397 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
CD53P19397 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.06■□□□□ 0.32
CD53P19397 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 NOC2LP2-201ENST00000407594 1944 ntBASIC17.06■□□□□ 0.32
CD53P19397 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC17.06■□□□□ 0.32
CD53P19397 LINC01568-207ENST00000641790 1380 ntBASIC17.06■□□□□ 0.32
CD53P19397 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC17.06■□□□□ 0.32
CD53P19397 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CD53P19397 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
CD53P19397 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.06■□□□□ 0.32
CD53P19397 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC17.06■□□□□ 0.32
CD53P19397 MIR1238-201ENST00000408483 83 ntBASIC17.06■□□□□ 0.32
CD53P19397 AC113347.1-201ENST00000413321 391 ntBASIC17.06■□□□□ 0.32
CD53P19397 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC17.06■□□□□ 0.32
CD53P19397 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC17.06■□□□□ 0.32
CD53P19397 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC17.06■□□□□ 0.32
CD53P19397 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.06■□□□□ 0.32
CD53P19397 PNN-205ENST00000556530 601 ntTSL 2 BASIC17.06■□□□□ 0.32
CD53P19397 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.06■□□□□ 0.32
CD53P19397 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.06■□□□□ 0.32
CD53P19397 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 NOC2LP1-202ENST00000452600 2235 ntBASIC17.06■□□□□ 0.32
CD53P19397 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CD53P19397 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
CD53P19397 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC17.05■□□□□ 0.32
CD53P19397 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.05■□□□□ 0.32
CD53P19397 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC17.05■□□□□ 0.32
CD53P19397 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC17.05■□□□□ 0.32
CD53P19397 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.05■□□□□ 0.32
CD53P19397 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.05■□□□□ 0.32
CD53P19397 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.05■□□□□ 0.32
CD53P19397 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.05■□□□□ 0.32
CD53P19397 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
CD53P19397 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.05■□□□□ 0.32
CD53P19397 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.05■□□□□ 0.32
CD53P19397 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 AL512353.2-201ENST00000448759 1962 ntBASIC17.05■□□□□ 0.32
CD53P19397 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.05■□□□□ 0.32
CD53P19397 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
CD53P19397 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC17.05■□□□□ 0.32
CD53P19397 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CD53P19397 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.04■□□□□ 0.32
CD53P19397 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CD53P19397 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms