Protein–RNA interactions for Protein: O15198

SMAD9, Mothers against decapentaplegic homolog 9, humanhuman

Known RBP Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9O15198 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC17.07■□□□□ 0.32
SMAD9O15198 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.07■□□□□ 0.32
SMAD9O15198 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SMAD9O15198 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC17.07■□□□□ 0.32
SMAD9O15198 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
SMAD9O15198 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SMAD9O15198 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.06■□□□□ 0.32
SMAD9O15198 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SMAD9O15198 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 MIR1238-201ENST00000408483 83 ntBASIC17.06■□□□□ 0.32
SMAD9O15198 MFAP1P1-201ENST00000442257 1255 ntBASIC17.06■□□□□ 0.32
SMAD9O15198 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.06■□□□□ 0.32
SMAD9O15198 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.06■□□□□ 0.32
SMAD9O15198 FITM1-202ENST00000559294 800 ntBASIC17.06■□□□□ 0.32
SMAD9O15198 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.06■□□□□ 0.32
SMAD9O15198 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
SMAD9O15198 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.06■□□□□ 0.32
SMAD9O15198 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.06■□□□□ 0.32
SMAD9O15198 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.06■□□□□ 0.32
SMAD9O15198 CACNA1B-205ENST00000371363 9758 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMAD9O15198 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
SMAD9O15198 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
SMAD9O15198 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SMAD9O15198 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.05■□□□□ 0.32
SMAD9O15198 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
SMAD9O15198 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC17.05■□□□□ 0.32
SMAD9O15198 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC17.05■□□□□ 0.32
SMAD9O15198 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.05■□□□□ 0.32
SMAD9O15198 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC17.05■□□□□ 0.32
SMAD9O15198 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.05■□□□□ 0.32
SMAD9O15198 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC17.05■□□□□ 0.32
SMAD9O15198 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SMAD9O15198 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.05■□□□□ 0.32
SMAD9O15198 FZD10-202ENST00000539839 3282 ntBASIC17.05■□□□□ 0.32
SMAD9O15198 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SMAD9O15198 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
SMAD9O15198 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.05■□□□□ 0.32
SMAD9O15198 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.05■□□□□ 0.32
SMAD9O15198 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SMAD9O15198 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMAD9O15198 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
SMAD9O15198 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMAD9O15198 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.04■□□□□ 0.32
SMAD9O15198 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
SMAD9O15198 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.04■□□□□ 0.32
SMAD9O15198 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.04■□□□□ 0.32
SMAD9O15198 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.04■□□□□ 0.32
SMAD9O15198 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.04■□□□□ 0.32
SMAD9O15198 GXYLT1P3-201ENST00000453058 1193 ntBASIC17.04■□□□□ 0.32
SMAD9O15198 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC17.04■□□□□ 0.32
SMAD9O15198 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
SMAD9O15198 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms